Result of FASTA (ccds) for
pF1KE0206
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0206, 226 aa
1>>>pF1KE0206 226 - 226 aa - 226 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8721+/-0.000686; mu= 18.0037+/- 0.042
mean_var=85.8476+/-17.076, 0's: 0 Z-trim(111.8): 95 B-trim: 0 in 0/51
Lambda= 0.138424
statistics sampled from 12569 (12679) to 12569 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.76), E-opt: 0.2 (0.389), width: 16
Scan time: 1.870
The best scores are: opt bits E(32554)
CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7 ( 226) 1497 307.9 3.4e-84
CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12 ( 166) 763 161.2 3.7e-40
CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16 ( 169) 695 147.6 4.5e-36
CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4 ( 173) 606 129.9 1e-30
CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7 ( 175) 591 126.9 8.3e-30
CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20 ( 172) 502 109.1 1.8e-24
CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18 ( 171) 492 107.1 7.3e-24
CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18 ( 177) 492 107.1 7.5e-24
CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18 ( 172) 485 105.7 1.9e-23
>>CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7 (226 aa)
initn: 1497 init1: 1497 opt: 1497 Z-score: 1625.1 bits: 307.9 E(32554): 3.4e-84
Smith-Waterman score: 1497; 100.0% identity (100.0% similar) in 226 aa overlap (1-226:1-226)
10 20 30 40 50 60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
130 140 150 160 170 180
190 200 210 220
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD
::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD
190 200 210 220
>>CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12 (166 aa)
initn: 804 init1: 761 opt: 763 Z-score: 834.5 bits: 161.2 E(32554): 3.7e-40
Smith-Waterman score: 829; 67.0% identity (77.5% similar) in 200 aa overlap (27-226:2-166)
10 20 30 40 50 60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
::..:.::: : :.:::::::.:.:::::::
CCDS31 MAPKKAKKRA-GGANSNVFSMFEQTQIQEFKE---
10 20 30
70 80 90 100 110 120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
:::::::::::::::.:::::::::::.:
CCDS31 -------------------------------AFTIMDQNRDGFIDKNDLRDTFAALGRVN
40 50 60
130 140 150 160 170 180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
:::::.. :.::::::::::::::::::::::.:::::::.:::::: :::: .::: ..
CCDS31 VKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVR
70 80 90 100 110 120
190 200 210 220
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD
: : :::.:::.::: :::::::::: :::::.:: ..::::::::
CCDS31 EMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD
130 140 150 160
>>CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16 (169 aa)
initn: 717 init1: 695 opt: 695 Z-score: 761.0 bits: 147.6 E(32554): 4.5e-36
Smith-Waterman score: 756; 60.5% identity (75.0% similar) in 200 aa overlap (27-226:2-167)
10 20 30 40 50 60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
::.::..:. .::.:::::::.:::::::
CCDS10 MAPKRAKRRTVEGGSSSVFSMFDQTQIQEFKE---
10 20 30
70 80 90 100 110 120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
:::..::::::.::::::::::::.::.:
CCDS10 -------------------------------AFTVIDQNRDGIIDKEDLRDTFAAMGRLN
40 50 60
130 140 150 160 170 180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
::::::.::.::: ::::::::::::::::::.:::..: ::::.: :::: .: ..
CCDS10 VKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLE
70 80 90 100 110 120
190 200 210 220
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD
: : :: ::::.::.:.:.::::::: ::.::.:.:::::::. ::
CCDS10 ELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE
130 140 150 160
>>CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4 (173 aa)
initn: 721 init1: 604 opt: 606 Z-score: 664.9 bits: 129.9 E(32554): 1e-30
Smith-Waterman score: 638; 53.7% identity (70.2% similar) in 205 aa overlap (27-226:2-172)
10 20 30 40 50
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGT-----ASSNVFSMFDQSQIQEF
: :...:. :. ::::::: :.:.:::::
CCDS43 MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEF
10 20 30
60 70 80 90 100 110
pF1KE0 KESLALSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAA
:: :::.::::::::::::::.::.:.
CCDS43 KE----------------------------------AFTLMDQNRDGFIDKEDLKDTYAS
40 50 60
120 130 140 150 160 170
pF1KE0 LGRINVKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVK
::. :::..::.::.::: ::::::.::..:::::.::: :::::.:::..: .::: ..
CCDS43 LGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKIN
70 80 90 100 110 120
180 190 200 210 220
pF1KE0 ADVIKEKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD
. ::. ::.:::... ::: ::: :: :::::. : :::::::::.
CCDS43 KEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE
130 140 150 160 170
>>CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7 (175 aa)
initn: 719 init1: 589 opt: 591 Z-score: 648.6 bits: 126.9 E(32554): 8.3e-30
Smith-Waterman score: 623; 51.2% identity (70.4% similar) in 203 aa overlap (24-226:7-174)
10 20 30 40 50 60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
: .. : :.:. .::::::::.:.:::::::
CCDS54 MASRKAGTRGKVAATKQAQ-RGSSNVFSMFEQAQIQEFKE---
10 20 30
70 80 90 100 110 120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
::. .::::::.: : :::.:.. ::...
CCDS54 -------------------------------AFSCIDQNRDGIICKADLRETYSQLGKVS
40 50 60
130 140 150 160 170 180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
: .:::.::..:. ::::::::::.:::::.::::::.:: ::..:: ::: :. : .:
CCDS54 VPEEELDAMLQEGKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKGVVNKDEFK
70 80 90 100 110 120
190 200 210 220
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD
. :.::::.:: ::.:::: : :. ::.::..:::.::::.::.
CCDS54 QLLLTQADKFSPAEVEQMFALTPMDLAGNIDYKSLCYIITHGDEKEE
130 140 150 160 170
>>CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20 (172 aa)
initn: 495 init1: 369 opt: 502 Z-score: 552.7 bits: 109.1 E(32554): 1.8e-24
Smith-Waterman score: 543; 46.5% identity (67.3% similar) in 202 aa overlap (26-226:5-171)
10 20 30 40 50 60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
.: .. :. :.::::.::::::::::::
CCDS13 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKE---
10 20 30
70 80 90 100 110 120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
::...:::::::::::::.: .:.::. :
CCDS13 -------------------------------AFNMIDQNRDGFIDKEDLHDMLASLGK-N
40 50 60
130 140 150 160 170 180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
.: ::.:..:::::::::.:::::::::.:::::..: .:: :: :..::.. : ..
CCDS13 PTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLR
70 80 90 100 110 120
190 200 210 220
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHG-EEKD
: : :..:::..::: .:. : : ::..: .. .. :: ..::
CCDS13 ELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD
130 140 150 160 170
>>CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18 (171 aa)
initn: 485 init1: 359 opt: 492 Z-score: 541.9 bits: 107.1 E(32554): 7.3e-24
Smith-Waterman score: 532; 46.5% identity (67.7% similar) in 198 aa overlap (30-226:9-170)
10 20 30 40 50 60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
...:: . :.::::.::::::::::::
CCDS11 MSSKRTKTKTKKRPQ-RATSNVFAMFDQSQIQEFKE---
10 20 30
70 80 90 100 110 120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
::...:::::::::::::.: .:.::. :
CCDS11 -------------------------------AFNMIDQNRDGFIDKEDLHDMLASLGK-N
40 50 60
130 140 150 160 170 180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
.: :.::..:::::::::.:::::::::.:::::..: .:: :: :. : .. : ..
CCDS11 PTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLR
70 80 90 100 110 120
190 200 210 220
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHG-EEKD
: : :..:::..::: ... : : ::..: .. .. :: ..::
CCDS11 ELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
130 140 150 160 170
>>CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18 (177 aa)
initn: 485 init1: 359 opt: 492 Z-score: 541.7 bits: 107.1 E(32554): 7.5e-24
Smith-Waterman score: 532; 46.5% identity (67.7% similar) in 198 aa overlap (30-226:15-176)
10 20 30 40 50 60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
...:: . :.::::.::::::::::::
CCDS77 MDLTTTMSSKRTKTKTKKRPQ-RATSNVFAMFDQSQIQEFKE---
10 20 30 40
70 80 90 100 110 120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
::...:::::::::::::.: .:.::. :
CCDS77 -------------------------------AFNMIDQNRDGFIDKEDLHDMLASLGK-N
50 60
130 140 150 160 170 180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
.: :.::..:::::::::.:::::::::.:::::..: .:: :: :. : .. : ..
CCDS77 PTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLR
70 80 90 100 110 120
190 200 210 220
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHG-EEKD
: : :..:::..::: ... : : ::..: .. .. :: ..::
CCDS77 ELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
130 140 150 160 170
>>CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18 (172 aa)
initn: 476 init1: 350 opt: 485 Z-score: 534.3 bits: 105.7 E(32554): 1.9e-23
Smith-Waterman score: 528; 45.0% identity (65.8% similar) in 202 aa overlap (26-226:5-171)
10 20 30 40 50 60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
.: .. :. :.::::.::::::::::::
CCDS11 MSSKKAKTKTTKKRPQRATSNVFAMFDQSQIQEFKE---
10 20 30
70 80 90 100 110 120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
::...:::::::::::::.: .:.::. :
CCDS11 -------------------------------AFNMIDQNRDGFIDKEDLHDMLASLGK-N
40 50 60
130 140 150 160 170 180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
. :.::..:::::::::.:::::::::.:::::..: .:: :: :. : .. : ..
CCDS11 PTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLR
70 80 90 100 110 120
190 200 210 220
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHG-EEKD
: : :..:::..::: ... : : ::..: .. .. :: ..::
CCDS11 ELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
130 140 150 160 170
226 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 21:18:55 2016 done: Thu Nov 3 21:18:56 2016
Total Scan time: 1.870 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]