Result of FASTA (ccds) for
pF1KE0194
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0194, 181 aa
1>>>pF1KE0194 181 - 181 aa - 181 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8444+/-0.000807; mu= 10.4501+/- 0.048
mean_var=73.6541+/-14.589, 0's: 0 Z-trim(107.8): 49 B-trim: 13 in 2/50
Lambda= 0.149443
statistics sampled from 9747 (9796) to 9747 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.301), width: 16
Scan time: 1.630
The best scores are: opt bits E(32554)
CCDS1244.1 RGS5 gene_id:8490|Hs108|chr1 ( 181) 1184 264.0 3.5e-71
CCDS58041.1 RGS5 gene_id:8490|Hs108|chr1 ( 185) 1166 260.2 5.3e-70
CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 ( 205) 637 146.1 1.2e-35
CCDS44270.1 RGS4 gene_id:5999|Hs108|chr1 ( 302) 637 146.2 1.7e-35
CCDS1348.1 RGS16 gene_id:6004|Hs108|chr1 ( 202) 593 136.6 8.8e-33
CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 ( 180) 591 136.2 1.1e-32
CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 ( 198) 585 134.9 2.9e-32
CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 ( 311) 562 130.0 1.3e-30
CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 ( 519) 558 129.3 3.8e-30
CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 ( 591) 558 129.3 4.2e-30
CCDS6797.1 RGS3 gene_id:5998|Hs108|chr9 ( 917) 558 129.4 6.2e-30
CCDS43869.1 RGS3 gene_id:5998|Hs108|chr9 (1198) 558 129.4 7.8e-30
CCDS44272.1 RGS4 gene_id:5999|Hs108|chr1 ( 187) 545 126.3 1.1e-29
CCDS1374.1 RGS18 gene_id:64407|Hs108|chr1 ( 235) 543 125.9 1.8e-29
CCDS1377.1 RGS2 gene_id:5997|Hs108|chr1 ( 211) 532 123.5 8.3e-29
CCDS41448.1 RGS21 gene_id:431704|Hs108|chr1 ( 152) 503 117.2 4.8e-27
CCDS55652.1 RGS5 gene_id:8490|Hs108|chr1 ( 73) 466 109.1 6.3e-25
CCDS1375.2 RGS1 gene_id:5996|Hs108|chr1 ( 209) 453 106.5 1.1e-23
CCDS1376.1 RGS13 gene_id:6003|Hs108|chr1 ( 159) 416 98.4 2.2e-21
CCDS6156.1 RGS20 gene_id:8601|Hs108|chr8 ( 241) 396 94.2 6.3e-20
CCDS69482.1 RGS20 gene_id:8601|Hs108|chr8 ( 273) 396 94.2 7e-20
CCDS6155.1 RGS20 gene_id:8601|Hs108|chr8 ( 388) 396 94.3 9.5e-20
CCDS5244.1 RGS17 gene_id:26575|Hs108|chr6 ( 210) 384 91.6 3.3e-19
CCDS13555.1 RGS19 gene_id:10287|Hs108|chr20 ( 217) 358 86.0 1.7e-17
CCDS41572.1 RGS10 gene_id:6001|Hs108|chr10 ( 167) 336 81.2 3.6e-16
CCDS31294.1 RGS10 gene_id:6001|Hs108|chr10 ( 181) 336 81.2 3.8e-16
CCDS60457.1 RGS7 gene_id:6000|Hs108|chr1 ( 424) 336 81.4 8.1e-16
CCDS60458.1 RGS7 gene_id:6000|Hs108|chr1 ( 469) 336 81.4 8.8e-16
CCDS60459.1 RGS7 gene_id:6000|Hs108|chr1 ( 477) 336 81.4 8.9e-16
CCDS31071.1 RGS7 gene_id:6000|Hs108|chr1 ( 487) 336 81.4 9.1e-16
CCDS73655.1 RGS6 gene_id:9628|Hs108|chr14 ( 437) 311 76.0 3.5e-14
CCDS9808.1 RGS6 gene_id:9628|Hs108|chr14 ( 472) 311 76.0 3.7e-14
CCDS55924.1 RGS6 gene_id:9628|Hs108|chr14 ( 490) 311 76.0 3.8e-14
CCDS45764.1 RGS9 gene_id:8787|Hs108|chr17 ( 671) 311 76.1 5e-14
CCDS42373.1 RGS9 gene_id:8787|Hs108|chr17 ( 674) 311 76.1 5.1e-14
CCDS43405.1 RGS14 gene_id:10636|Hs108|chr5 ( 566) 304 74.5 1.2e-13
CCDS10403.1 RGS11 gene_id:8786|Hs108|chr16 ( 446) 283 69.9 2.3e-12
CCDS66884.1 RGS11 gene_id:8786|Hs108|chr16 ( 456) 283 69.9 2.4e-12
CCDS42088.1 RGS11 gene_id:8786|Hs108|chr16 ( 467) 283 69.9 2.4e-12
CCDS3368.1 RGS12 gene_id:6002|Hs108|chr4 ( 799) 263 65.7 7.7e-11
>>CCDS1244.1 RGS5 gene_id:8490|Hs108|chr1 (181 aa)
initn: 1184 init1: 1184 opt: 1184 Z-score: 1391.4 bits: 264.0 E(32554): 3.5e-71
Smith-Waterman score: 1184; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KE0 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYNEKPEKPAKTQKTSLDEALQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYNEKPEKPAKTQKTSLDEALQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 WRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 IQTEAPKEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEFYQELI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 IQTEAPKEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEFYQELI
130 140 150 160 170 180
pF1KE0 K
:
CCDS12 K
>>CCDS58041.1 RGS5 gene_id:8490|Hs108|chr1 (185 aa)
initn: 889 init1: 850 opt: 1166 Z-score: 1370.3 bits: 260.2 E(32554): 5.3e-70
Smith-Waterman score: 1166; 97.8% identity (97.8% similar) in 185 aa overlap (1-181:1-185)
10 20 30 40 50 60
pF1KE0 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYNEKPEKPAKTQKTSLDEALQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYNEKPEKPAKTQKTSLDEALQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 WRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 WRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEF
70 80 90 100 110 120
130 140 150 160 170
pF1KE0 IQTEAPKEV----NIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEFY
::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IQTEAPKEVGLWVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEFY
130 140 150 160 170 180
180
pF1KE0 QELIK
:::::
CCDS58 QELIK
>>CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 (205 aa)
initn: 622 init1: 471 opt: 637 Z-score: 753.2 bits: 146.1 E(32554): 1.2e-35
Smith-Waterman score: 637; 53.3% identity (82.8% similar) in 180 aa overlap (1-180:1-178)
10 20 30 40 50 60
pF1KE0 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYNEKPEKPAKTQKTSLDEALQ
::::::.:: :::. ::..: .::.:::: :: . .:.: .: . :..: .:. .
CCDS12 MCKGLAGLPASCLRSAKDMKHRLGFLLQKSDSC-EHNSSHNKK-DKVVICQRVSQEEVKK
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 WRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEF
: .::..:.... :::.::.:::::.::::..:::.::.:::::::.:.. :::.::.::
CCDS12 WAESLENLISHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 IQTEAPKEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEFYQELI
:...: ::::.: :.. : .:..::... :: :::.: :::::: ::..:.:: .:.
CCDS12 ISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFYLDLV
120 130 140 150 160 170
pF1KE0 K
CCDS12 NPSSCGAEKQKGAKSSADCASLVPQCA
180 190 200
>>CCDS44270.1 RGS4 gene_id:5999|Hs108|chr1 (302 aa)
initn: 622 init1: 471 opt: 637 Z-score: 750.5 bits: 146.2 E(32554): 1.7e-35
Smith-Waterman score: 637; 53.3% identity (82.8% similar) in 180 aa overlap (1-180:98-275)
10 20 30
pF1KE0 MCKGLAALPHSCLERAKEIKIKLGILLQKP
::::::.:: :::. ::..: .::.::::
CCDS44 GEEAKYAQSRSHSSSCRISFLLANSKLLNKMCKGLAGLPASCLRSAKDMKHRLGFLLQKS
70 80 90 100 110 120
40 50 60 70 80 90
pF1KE0 DSVGDLVIPYNEKPEKPAKTQKTSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEEN
:: . .:.: .: . :..: .:. .: .::..:.... :::.::.:::::.::::
CCDS44 DSC-EHNSSHNKK-DKVVICQRVSQEEVKKWAESLENLISHECGLAAFKAFLKSEYSEEN
130 140 150 160 170 180
100 110 120 130 140 150
pF1KE0 LEFWIACEDYKKIKSPAKMAEKAKQIYEEFIQTEAPKEVNIDHFTKDITMKNLVEPSLSS
..:::.::.:::::::.:.. :::.::.:::...: ::::.: :.. : .:..::...
CCDS44 IDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREETSRNMLEPTITC
190 200 210 220 230 240
160 170 180
pF1KE0 FDMAQKRIHALMEKDSLPRFVRSEFYQELIK
:: :::.: :::::: ::..:.:: .:.
CCDS44 FDEAQKKIFNLMEKDSYRRFLKSRFYLDLVNPSSCGAEKQKGAKSSADCASLVPQCA
250 260 270 280 290 300
>>CCDS1348.1 RGS16 gene_id:6004|Hs108|chr1 (202 aa)
initn: 608 init1: 470 opt: 593 Z-score: 702.0 bits: 136.6 E(32554): 8.8e-33
Smith-Waterman score: 593; 51.1% identity (77.8% similar) in 180 aa overlap (1-179:1-180)
10 20 30 40 50
pF1KE0 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYN-EKPEKPAKTQKTSLDEAL
::. :::.: .:::::::.: .:::.:.: . : . : : .: ... ...:
CCDS13 MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 QWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEE
::.:.: ::... :.:.:..:::.::::::::::.:::..:::.: .:.: .:.::.::
CCDS13 GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 FIQTEAPKEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEFYQEL
:: .:::::::::: :...: :: . . :: :: . ..:::::: :::..: :..:
CCDS13 FICSEAPKEVNIDHETHELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL
130 140 150 160 170 180
180
pF1KE0 IK
CCDS13 AAQASAASATLSSCSLDEPSHT
190 200
>>CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 (180 aa)
initn: 569 init1: 524 opt: 591 Z-score: 700.5 bits: 136.2 E(32554): 1.1e-32
Smith-Waterman score: 591; 51.8% identity (80.7% similar) in 166 aa overlap (15-180:9-172)
10 20 30 40 50 60
pF1KE0 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYNEKPEKPAKTQKTSLDEALQ
: : .. .:: : .: :: .:.. .::.. : . : .:: .
CCDS41 MAALLMPRRNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRALK--RLSTEEATR
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 WRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEF
: ::.: ::...::.:.:..:::.::::::::::.:::..:: .: ::.. ::..:.:::
CCDS41 WADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 IQTEAPKEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLPRFVRSEFYQELI
....::.::::: :.. : ::: ::::. ::.:: ..:.:::::: :::.::..: .:.
CCDS41 VDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLL
120 130 140 150 160 170
pF1KE0 K
CCDS41 SQSQRRLS
180
>>CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 (198 aa)
initn: 569 init1: 524 opt: 585 Z-score: 692.8 bits: 134.9 E(32554): 2.9e-32
Smith-Waterman score: 585; 51.8% identity (81.1% similar) in 164 aa overlap (17-180:29-190)
10 20 30 40
pF1KE0 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYNEKPEKPA
: .. .:: : .: :: .:.. .::..
CCDS13 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 KTQKTSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAK
: . : .:: .: ::.: ::...::.:.:..:::.::::::::::.:::..:: .: ::
CCDS13 K--RLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAK
70 80 90 100 110
110 120 130 140 150 160
pF1KE0 MAEKAKQIYEEFIQTEAPKEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKDSLP
.. ::..:.:::....::.::::: :.. : ::: ::::. ::.:: ..:.:::::: :
CCDS13 LVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYP
120 130 140 150 160 170
170 180
pF1KE0 RFVRSEFYQELIK
::.::..: .:.
CCDS13 RFLRSKMYLDLLSQSQRRLS
180 190
>>CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 (311 aa)
initn: 558 init1: 518 opt: 562 Z-score: 662.9 bits: 130.0 E(32554): 1.3e-30
Smith-Waterman score: 562; 52.4% identity (77.4% similar) in 168 aa overlap (13-180:138-302)
10 20 30 40
pF1KE0 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYNE
...::..: ::::. .. .: : :
CCDS35 PICGPKVGGPTEMLRGMYLTRNGNLQRRHTMKEAKDMKNKLGIFRRRNESPG---APPAG
110 120 130 140 150 160
50 60 70 80 90 100
pF1KE0 KPEKPAKTQKTSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKK
: .: :. : . .:::.: .::.::: ..:::: :..::..::::::::::.::::.::
CCDS35 KADKMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKK
170 180 190 200 210 220
110 120 130 140 150 160
pF1KE0 IKSPAKMAEKAKQIYEEFIQTEAPKEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALM
.:: .::: :::.:. :.: .: ::::.: .:.. : :: . . ::.::::: .::
CCDS35 VKSQSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLM
230 240 250 260 270 280
170 180
pF1KE0 EKDSLPRFVRSEFYQELIK
:::: :::.::..: .::
CCDS35 EKDSYPRFLRSDLYLDLINQKKMSPPL
290 300 310
>>CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 (519 aa)
initn: 558 init1: 518 opt: 558 Z-score: 654.8 bits: 129.3 E(32554): 3.8e-30
Smith-Waterman score: 558; 53.3% identity (77.0% similar) in 165 aa overlap (16-180:349-510)
10 20 30 40
pF1KE0 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYNEKPE
::..: ::::. .. .: : : : .
CCDS67 LFFTGHRKMSGADTVGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPG---APPAGKAD
320 330 340 350 360 370
50 60 70 80 90 100
pF1KE0 KPAKTQKTSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKS
: :. : . .:::.: .::.::: ..:::: :..::..::::::::::.::::.::.::
CCDS67 KMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKS
380 390 400 410 420 430
110 120 130 140 150 160
pF1KE0 PAKMAEKAKQIYEEFIQTEAPKEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKD
.::: :::.:. :.: .: ::::.: .:.. : :: . . ::.::::: .:::::
CCDS67 QSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEKD
440 450 460 470 480 490
170 180
pF1KE0 SLPRFVRSEFYQELIK
: :::.::..: .::
CCDS67 SYPRFLRSDLYLDLINQKKMSPPL
500 510
>>CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 (591 aa)
initn: 558 init1: 518 opt: 558 Z-score: 653.9 bits: 129.3 E(32554): 4.2e-30
Smith-Waterman score: 558; 53.3% identity (77.0% similar) in 165 aa overlap (16-180:421-582)
10 20 30 40
pF1KE0 MCKGLAALPHSCLERAKEIKIKLGILLQKPDSVGDLVIPYNEKPE
::..: ::::. .. .: : : : .
CCDS65 AASPPDSKMSGADTVGDDDEASRKRKSKNLAKDMKNKLGIFRRRNESPG---APPAGKAD
400 410 420 430 440
50 60 70 80 90 100
pF1KE0 KPAKTQKTSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKS
: :. : . .:::.: .::.::: ..:::: :..::..::::::::::.::::.::.::
CCDS65 KMMKSFKPTSEEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKS
450 460 470 480 490 500
110 120 130 140 150 160
pF1KE0 PAKMAEKAKQIYEEFIQTEAPKEVNIDHFTKDITMKNLVEPSLSSFDMAQKRIHALMEKD
.::: :::.:. :.: .: ::::.: .:.. : :: . . ::.::::: .:::::
CCDS65 QSKMASKAKKIFAEYIAIQACKEVNLDSYTREHTKDNLQSVTRGCFDLAQKRIFGLMEKD
510 520 530 540 550 560
170 180
pF1KE0 SLPRFVRSEFYQELIK
: :::.::..: .::
CCDS65 SYPRFLRSDLYLDLINQKKMSPPL
570 580 590
181 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 21:41:37 2016 done: Thu Nov 3 21:41:38 2016
Total Scan time: 1.630 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]