Result of FASTA (omim) for
pF1KE0148
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0148, 226 aa
1>>>pF1KE0148 226 - 226 aa - 226 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1566+/-0.00034; mu= 14.7239+/- 0.021
mean_var=65.1176+/-13.307, 0's: 0 Z-trim(115.1): 32 B-trim: 278 in 1/53
Lambda= 0.158937
statistics sampled from 25371 (25399) to 25371 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.696), E-opt: 0.2 (0.298), width: 16
Scan time: 6.600
The best scores are: opt bits E(85289)
NP_057001 (OMIM: 602321) glutathione S-transferase ( 226) 1517 356.3 2.4e-98
NP_001137152 (OMIM: 602321) glutathione S-transfer ( 214) 882 210.7 1.6e-54
NP_001137151 (OMIM: 602321) glutathione S-transfer ( 282) 882 210.7 2e-54
NP_001137153 (OMIM: 602321) glutathione S-transfer ( 183) 877 209.5 3.1e-54
>>NP_057001 (OMIM: 602321) glutathione S-transferase kap (226 aa)
initn: 1517 init1: 1517 opt: 1517 Z-score: 1886.5 bits: 356.3 E(85289): 2.4e-98
Smith-Waterman score: 1517; 99.6% identity (100.0% similar) in 226 aa overlap (1-226:1-226)
10 20 30 40 50 60
pF1KE0 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSGNKPPGLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSGNKPPGLLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 RKGLYMANDLKLLRHHLQIPIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 RKGLYMANDLKLLRHHLQIPIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIAAPKVKNQLKETTEAACRYGA
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
NP_057 LWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGA
130 140 150 160 170 180
190 200 210 220
pF1KE0 FGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL
::::::::::::::::::::::::::::::::::::::::::::::
NP_057 FGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL
190 200 210 220
>>NP_001137152 (OMIM: 602321) glutathione S-transferase (214 aa)
initn: 1429 init1: 882 opt: 882 Z-score: 1099.9 bits: 210.7 E(85289): 1.6e-54
Smith-Waterman score: 1409; 94.2% identity (94.7% similar) in 226 aa overlap (1-226:1-214)
10 20 30 40 50 60
pF1KE0 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSGNKPPGLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSGNKPPGLLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 RKGLYMANDLKLLRHHLQIPIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKGLYMANDLKLLRHHLQIPIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIAAPKVKNQLKETTEAACRYGA
:::::::: ::::::::::::::::::::.:::::::::::::::::::
NP_001 LWMRVWSR------------AAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGA
130 140 150 160
190 200 210 220
pF1KE0 FGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL
170 180 190 200 210
>>NP_001137151 (OMIM: 602321) glutathione S-transferase (282 aa)
initn: 882 init1: 882 opt: 882 Z-score: 1098.1 bits: 210.7 E(85289): 2e-54
Smith-Waterman score: 1228; 77.9% identity (78.3% similar) in 258 aa overlap (1-202:1-258)
10 20 30 40 50 60
pF1KE0 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSGNKPPGLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSGNKPPGLLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 RKGLYMANDLKLLRHHLQIPIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKGLYMANDLKLLRHHLQIPIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRE
70 80 90 100 110 120
pF1KE0 LWMRVWSR----------------------------------------------------
::::::::
NP_001 LWMRVWSRVSVGLWESSGRTLDDFLTFPRHVFRVMILPPPGGSTVLPVTPLSPHRLPAVF
130 140 150 160 170 180
130 140 150 160 170 180
pF1KE0 ----NEDITEPQSILAAAEKAGMSAEQAQGLLEKIAAPKVKNQLKETTEAACRYGAFGLP
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
NP_001 SSSQNEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGAFGLP
190 200 210 220 230 240
190 200 210 220
pF1KE0 ITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL
::::::::::::::::::
NP_001 ITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL
250 260 270 280
>>NP_001137153 (OMIM: 602321) glutathione S-transferase (183 aa)
initn: 872 init1: 872 opt: 877 Z-score: 1094.7 bits: 209.5 E(85289): 3.1e-54
Smith-Waterman score: 1122; 80.5% identity (81.0% similar) in 226 aa overlap (1-226:1-183)
10 20 30 40 50 60
pF1KE0 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSGNKPPGLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGPLPRTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPSLITGIMKDSG--------
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 RKGLYMANDLKLLRHHLQIPIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRE
:::::::::::::::::::::::::
NP_001 -----------------------------------SLSAMRFLTAVNLEHPEMLEKASRE
60 70
130 140 150 160 170 180
pF1KE0 LWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIAAPKVKNQLKETTEAACRYGA
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
NP_001 LWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIATPKVKNQLKETTEAACRYGA
80 90 100 110 120 130
190 200 210 220
pF1KE0 FGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPIPPAVNARL
140 150 160 170 180
226 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 00:19:48 2016 done: Fri Nov 4 00:19:49 2016
Total Scan time: 6.600 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]