Result of FASTA (ccds) for
pF1KE0137
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0137, 172 aa
1>>>pF1KE0137 172 - 172 aa - 172 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2514+/-0.000944; mu= 9.4718+/- 0.057
mean_var=120.6108+/-24.312, 0's: 0 Z-trim(109.2): 120 B-trim: 4 in 1/50
Lambda= 0.116783
statistics sampled from 10587 (10714) to 10587 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.329), width: 16
Scan time: 1.920
The best scores are: opt bits E(32554)
CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX ( 172) 1087 193.4 5.8e-50
CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 ( 172) 961 172.2 1.4e-43
CCDS4066.1 CETN3 gene_id:1070|Hs108|chr5 ( 167) 601 111.5 2.5e-25
CCDS75274.1 CETN3 gene_id:1070|Hs108|chr5 ( 191) 570 106.3 1e-23
CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 ( 149) 496 93.8 4.9e-20
CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 ( 149) 496 93.8 4.9e-20
CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 ( 149) 496 93.8 4.9e-20
CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 ( 149) 478 90.8 4e-19
CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20 ( 160) 402 78.0 3e-15
CCDS78036.1 CETN3 gene_id:1070|Hs108|chr5 ( 153) 375 73.4 6.8e-14
CCDS2857.1 TNNC1 gene_id:7134|Hs108|chr3 ( 161) 365 71.7 2.3e-13
CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10 ( 146) 352 69.5 9.7e-13
CCDS81255.1 CALML6 gene_id:163688|Hs108|chr1 ( 164) 314 63.2 8.9e-11
>>CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX (172 aa)
initn: 1087 init1: 1087 opt: 1087 Z-score: 1010.5 bits: 193.4 E(32554): 5.8e-50
Smith-Waterman score: 1087; 100.0% identity (100.0% similar) in 172 aa overlap (1-172:1-172)
10 20 30 40 50 60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
70 80 90 100 110 120
130 140 150 160 170
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
130 140 150 160 170
>>CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 (172 aa)
initn: 961 init1: 961 opt: 961 Z-score: 895.8 bits: 172.2 E(32554): 1.4e-43
Smith-Waterman score: 961; 83.7% identity (98.8% similar) in 172 aa overlap (1-172:1-172)
10 20 30 40 50 60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
:::.::: . ::..:.....:::::::.::::.::::::::.::.::::.::::::::::
CCDS11 MASGFKKPSAASTGQKRKVAPKPELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
::::.:::.::::::.:.:::::..:.:::.:::::::::::::::::::.:::::::::
CCDS11 GFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGK
70 80 90 100 110 120
130 140 150 160 170
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
::::::::::.::::::::::::::::::::::::::.:.::::::::::::
CCDS11 ISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIMKKTSLY
130 140 150 160 170
>>CCDS4066.1 CETN3 gene_id:1070|Hs108|chr5 (167 aa)
initn: 595 init1: 595 opt: 601 Z-score: 568.2 bits: 111.5 E(32554): 2.5e-25
Smith-Waterman score: 601; 54.2% identity (84.9% similar) in 166 aa overlap (1-166:1-163)
10 20 30 40 50 60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
:. ... ......::. . ::.:::::::..::.:::.: .:: .:::::::::
CCDS40 MSLALRSELVVDKTKRKK---RRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRAL
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
::. :: .. :.... :.:.:::..: :: :.:. . :.: .:::::::::::::..::
CCDS40 GFDVKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGK
60 70 80 90 100 110
130 140 150 160 170
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
::..::.:::.:::::..::::. ::.: :.:::::....::. ::
CCDS40 ISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIMTGDI
120 130 140 150 160
>>CCDS75274.1 CETN3 gene_id:1070|Hs108|chr5 (191 aa)
initn: 667 init1: 562 opt: 570 Z-score: 539.2 bits: 106.3 E(32554): 1e-23
Smith-Waterman score: 570; 54.8% identity (84.7% similar) in 157 aa overlap (1-157:1-154)
10 20 30 40 50 60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
:. ... ......::. . ::.:::::::..::.:::.: .:: .:::::::::
CCDS75 MSLALRSELVVDKTKRKK---RRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRAL
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
::. :: .. :.... :.:.:::..: :: :.:. . :.: .:::::::::::::..::
CCDS75 GFDVKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGK
60 70 80 90 100 110
130 140 150 160 170
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
::..::.:::.:::::..::::. ::.: :.:::::.
CCDS75 ISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEILKNILLLPIWSRCLSLNREFFSE
120 130 140 150 160 170
CCDS75 VNQEEFIAIMTGDI
180 190
>>CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 (149 aa)
initn: 797 init1: 494 opt: 496 Z-score: 473.2 bits: 93.8 E(32554): 4.9e-20
Smith-Waterman score: 496; 52.4% identity (82.5% similar) in 143 aa overlap (24-166:4-146)
10 20 30 40 50 60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
.::::: :..:::.::: :: ::: .::: ..::.:
CCDS98 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL
10 20 30 40
70 80 90 100 110 120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
: .: . :.. ::.:.: .:.: ..: .:::.:..::.. :..::: .::..:: : .:
CCDS98 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY
50 60 70 80 90 100
130 140 150 160 170
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
:: .:..: .:::.:::::..::: ::: ::::.:. .::...:
CCDS98 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
110 120 130 140
>>CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 (149 aa)
initn: 797 init1: 494 opt: 496 Z-score: 473.2 bits: 93.8 E(32554): 4.9e-20
Smith-Waterman score: 496; 52.4% identity (82.5% similar) in 143 aa overlap (24-166:4-146)
10 20 30 40 50 60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
.::::: :..:::.::: :: ::: .::: ..::.:
CCDS18 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL
10 20 30 40
70 80 90 100 110 120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
: .: . :.. ::.:.: .:.: ..: .:::.:..::.. :..::: .::..:: : .:
CCDS18 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY
50 60 70 80 90 100
130 140 150 160 170
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
:: .:..: .:::.:::::..::: ::: ::::.:. .::...:
CCDS18 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
110 120 130 140
>>CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 (149 aa)
initn: 797 init1: 494 opt: 496 Z-score: 473.2 bits: 93.8 E(32554): 4.9e-20
Smith-Waterman score: 496; 52.4% identity (82.5% similar) in 143 aa overlap (24-166:4-146)
10 20 30 40 50 60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
.::::: :..:::.::: :: ::: .::: ..::.:
CCDS33 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL
10 20 30 40
70 80 90 100 110 120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
: .: . :.. ::.:.: .:.: ..: .:::.:..::.. :..::: .::..:: : .:
CCDS33 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY
50 60 70 80 90 100
130 140 150 160 170
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
:: .:..: .:::.:::::..::: ::: ::::.:. .::...:
CCDS33 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
110 120 130 140
>>CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 (149 aa)
initn: 738 init1: 476 opt: 478 Z-score: 456.8 bits: 90.8 E(32554): 4e-19
Smith-Waterman score: 478; 49.0% identity (81.1% similar) in 143 aa overlap (24-166:4-146)
10 20 30 40 50 60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
.::::: :..:::.::: :: : : ..:: ..::.:
CCDS70 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSL
10 20 30 40
70 80 90 100 110 120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
: .: . :.. :.::::..:.: ..: .:: .:..::.. :..::: .::..:: : .:
CCDS70 GQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGF
50 60 70 80 90 100
130 140 150 160 170
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
.: .:..: .:::.:.:::..::: :: ::::.:. .::.:..
CCDS70 VSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK
110 120 130 140
>>CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20 (160 aa)
initn: 552 init1: 247 opt: 402 Z-score: 387.2 bits: 78.0 E(32554): 3e-15
Smith-Waterman score: 402; 39.7% identity (76.7% similar) in 146 aa overlap (25-167:12-157)
10 20 30 40 50 60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
:.::. :.. :::.::::: : :.:::: ..:: :
CCDS13 MTDQQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRML
10 20 30 40
70 80 90 100 110
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEK---DTKEEILKAFKLFDDDE
: : :::. .: :.:..:.: ..: .::..:...:.: ..::. . :..:: .
CCDS13 GQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNA
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE0 TGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
: :. ..: .. . ::..::::.. .. ..:...::... .:::..:.
CCDS13 DGYIDPEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEGVQ
110 120 130 140 150 160
>>CCDS78036.1 CETN3 gene_id:1070|Hs108|chr5 (153 aa)
initn: 395 init1: 367 opt: 375 Z-score: 362.9 bits: 73.4 E(32554): 6.8e-14
Smith-Waterman score: 375; 50.0% identity (81.4% similar) in 118 aa overlap (1-118:1-115)
10 20 30 40 50 60
pF1KE0 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
:. ... ......::. . ::.:::::::..::.:::.: .:: .:::::::::
CCDS78 MSLALRSELVVDKTKRKK---RRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRAL
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
::. :: .. :.... :.:.:::..: :: :.:. . :.: .:::::::::::::..
CCDS78 GFDVKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSVL
60 70 80 90 100 110
130 140 150 160 170
pF1KE0 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
CCDS78 KNILLLPIWSRCLSLNREFFSEVNQEEFIAIMTGDI
120 130 140 150
172 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 01:03:23 2016 done: Fri Nov 4 01:03:23 2016
Total Scan time: 1.920 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]