FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0131, 183 aa
  1>>>pF1KE0131 183 - 183 aa - 183 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7925+/-0.000747; mu= 10.7745+/- 0.045
 mean_var=70.6033+/-13.867, 0's: 0 Z-trim(109.1): 30  B-trim: 142 in 2/50
 Lambda= 0.152638
 statistics sampled from 10620 (10636) to 10620 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.327), width:  16
 Scan time:  1.640

The best scores are:                                      opt bits E(32554)
CCDS14700.1 FATE1 gene_id:89885|Hs108|chrX         ( 183) 1209 274.7 2.2e-74


>>CCDS14700.1 FATE1 gene_id:89885|Hs108|chrX              (183 aa)
 initn: 1209 init1: 1209 opt: 1209  Z-score: 1448.8  bits: 274.7 E(32554): 2.2e-74
Smith-Waterman score: 1209; 100.0% identity (100.0% similar) in 183 aa overlap (1-183:1-183)

               10        20        30        40        50        60
pF1KE0 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 SASAKRVWNMTATRPKKMGSQLPKPRMLRESGHGDAHLQEYAGNFQGIRFHYDRNPGTDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SASAKRVWNMTATRPKKMGSQLPKPRMLRESGHGDAHLQEYAGNFQGIRFHYDRNPGTDA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 VAQTSLEEFNVLEMEVMRRQLYAVNRRLRALEEQGATWRHRETLIIAVLVSASIANLWLW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VAQTSLEEFNVLEMEVMRRQLYAVNRRLRALEEQGATWRHRETLIIAVLVSASIANLWLW
              130       140       150       160       170       180

          
pF1KE0 MNQ
       :::
CCDS14 MNQ
          




183 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 01:27:57 2016 done: Fri Nov  4 01:27:57 2016
 Total Scan time:  1.640 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]