Result of FASTA (ccds) for
pF1KE0104
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0104, 462 aa
1>>>pF1KE0104 462 - 462 aa - 462 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9509+/-0.00104; mu= 14.1934+/- 0.062
mean_var=105.6736+/-20.461, 0's: 0 Z-trim(106.9): 116 B-trim: 0 in 0/51
Lambda= 0.124765
statistics sampled from 9131 (9262) to 9131 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.663), E-opt: 0.2 (0.285), width: 16
Scan time: 3.160
The best scores are: opt bits E(32554)
CCDS4096.1 NUDT12 gene_id:83594|Hs108|chr5 ( 462) 3134 575.3 4.5e-164
CCDS75284.1 NUDT12 gene_id:83594|Hs108|chr5 ( 444) 2689 495.2 5.6e-140
CCDS60553.1 NUDT13 gene_id:25961|Hs108|chr10 ( 226) 388 80.8 1.6e-15
CCDS31220.1 NUDT13 gene_id:25961|Hs108|chr10 ( 352) 388 81.0 2.3e-15
CCDS73148.1 NUDT13 gene_id:25961|Hs108|chr10 ( 155) 351 74.0 1.2e-13
>>CCDS4096.1 NUDT12 gene_id:83594|Hs108|chr5 (462 aa)
initn: 3134 init1: 3134 opt: 3134 Z-score: 3059.2 bits: 575.3 E(32554): 4.5e-164
Smith-Waterman score: 3134; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462)
10 20 30 40 50 60
pF1KE0 MSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALMYAARNGHPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 MSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALMYAARNGHPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 IVQFLLEKGCDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 IVQFLLEKGCDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 FSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 FSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 YTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 YTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGYKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 KQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGYKR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 LCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 LCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 ETIEDAVRREVEEESGVKVGHVQYVACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS40 ETIEDAVRREVEEESGVKVGHVQYVACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDAR
370 380 390 400 410 420
430 440 450 460
pF1KE0 WFTREQVLDVLTKGKQQAFFVPPSRAIAHQLIKHWIRINPNL
::::::::::::::::::::::::::::::::::::::::::
CCDS40 WFTREQVLDVLTKGKQQAFFVPPSRAIAHQLIKHWIRINPNL
430 440 450 460
>>CCDS75284.1 NUDT12 gene_id:83594|Hs108|chr5 (444 aa)
initn: 2999 init1: 2689 opt: 2689 Z-score: 2626.5 bits: 495.2 E(32554): 5.6e-140
Smith-Waterman score: 2967; 96.1% identity (96.1% similar) in 462 aa overlap (1-462:1-444)
10 20 30 40 50 60
pF1KE0 MSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALMYAARNGHPE
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALM---------
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 IVQFLLEKGCDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENY
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ---------CDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENY
60 70 80 90 100
130 140 150 160 170 180
pF1KE0 FSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 FSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLN
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE0 YTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 YTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEF
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE0 KQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGYKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 KQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGYKR
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE0 LCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPG
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE0 ETIEDAVRREVEEESGVKVGHVQYVACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ETIEDAVRREVEEESGVKVGHVQYVACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDAR
350 360 370 380 390 400
430 440 450 460
pF1KE0 WFTREQVLDVLTKGKQQAFFVPPSRAIAHQLIKHWIRINPNL
::::::::::::::::::::::::::::::::::::::::::
CCDS75 WFTREQVLDVLTKGKQQAFFVPPSRAIAHQLIKHWIRINPNL
410 420 430 440
>>CCDS60553.1 NUDT13 gene_id:25961|Hs108|chr10 (226 aa)
initn: 556 init1: 263 opt: 388 Z-score: 392.1 bits: 80.8 E(32554): 1.6e-15
Smith-Waterman score: 557; 44.3% identity (70.8% similar) in 212 aa overlap (256-456:15-216)
230 240 250 260 270 280
pF1KE0 AWFALGIDPIAAEEFKQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCP
::.::. ..:.... :...: ::. ..::
CCDS60 METELKGSFIELRKALFQLNARDASLLSTAQALLRWHDAHQFCS
10 20 30 40
290 300 310 320 330 340
pF1KE0 TCGNATKIEEGGYKRLCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRF
:. :: . .: ::.: :: : .. ::.. ::.: : :::.:::.::. :
CCDS60 RSGQPTKKNVAGSKRVC-----PSNNIIY---YPQMAPVAITLV--SDGTRCLLARQSSF
50 60 70 80 90
350 360 370 380 390 400
pF1KE0 PPGMFTCLAGFIEPGETIEDAVRREVEEESGVKVGHVQYVACQPWPMPS-SLMIGCLALA
: ::.. :::: . ::..:...:::: :: :..: .:: : : ::.:: ::::.: : .
CCDS60 PKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYASQHWPFPSGSLMIACHATV
100 110 120 130 140 150
410 420 430 440 450
pF1KE0 V--STEIKVDKNEIEDARWFTREQVLDVLT-KG---KQQA----FFVPPSRAIAHQLIKH
.:::.:. :.: : ::....: .: :: .:: :..::. ::.:::::.
CCDS60 KPGQTEIQVNLRELETAAWFSHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISHQLIKE
160 170 180 190 200 210
460
pF1KE0 WIRINPNL
:.
CCDS60 WVEKQTCSSLPA
220
>>CCDS31220.1 NUDT13 gene_id:25961|Hs108|chr10 (352 aa)
initn: 562 init1: 263 opt: 388 Z-score: 389.5 bits: 81.0 E(32554): 2.3e-15
Smith-Waterman score: 577; 36.8% identity (62.0% similar) in 334 aa overlap (142-456:41-342)
120 130 140 150 160 170
pF1KE0 NEVEECENYFSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQ
:... . .: :: .: ::. .... .
CCDS31 RKFFWCYRLLSTYVTKTRYLFELKEDDDACKKAQQTGAFYLFHSLAPLLQTSAHQ--YLA
20 30 40 50 60
180 190 200 210 220 230
pF1KE0 PEVRLCQLNYTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFAL-
:. : .: :.. : .:.:..: : ..: :::::
CCDS31 PRHSLLEL------------ERLLGKFGQDAQRIEDSVL--IGCSEQQE-----AWFALD
70 80 90 100
240 250 260 270 280
pF1KE0 -GIDP---IAAEEFKQRHENCY---FLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKF
:.: :.: : . :. :.. ::.::. ..:.... :...: ::. ..:
CCDS31 LGLDSSFSISASLHKPEMETELKGSFIEL-RKALFQLNARDASLLSTAQALLRWHDAHQF
110 120 130 140 150 160
290 300 310 320 330 340
pF1KE0 CPTCGNATKIEEGGYKRLCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQK
: :. :: . .: ::.: :: : .. ::.. ::.: : :::.:::.::.
CCDS31 CSRSGQPTKKNVAGSKRVC-----PSNNIIY---YPQMAPVAITLV--SDGTRCLLARQS
170 180 190 200 210
350 360 370 380 390 400
pF1KE0 RFPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKVGHVQYVACQPWPMPS-SLMIGCLA
:: ::.. :::: . ::..:...:::: :: :..: .:: : : ::.:: ::::.: :
CCDS31 SFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYASQHWPFPSGSLMIACHA
220 230 240 250 260 270
410 420 430 440 450
pF1KE0 LAV--STEIKVDKNEIEDARWFTREQVLDVLT-KG---KQQA----FFVPPSRAIAHQLI
. .:::.:. :.: : ::....: .: :: .:: :..::. ::.::::
CCDS31 TVKPGQTEIQVNLRELETAAWFSHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISHQLI
280 290 300 310 320 330
460
pF1KE0 KHWIRINPNL
:.:.
CCDS31 KEWVEKQTCSSLPA
340 350
>>CCDS73148.1 NUDT13 gene_id:25961|Hs108|chr10 (155 aa)
initn: 390 init1: 263 opt: 351 Z-score: 358.2 bits: 74.0 E(32554): 1.2e-13
Smith-Waterman score: 420; 49.0% identity (72.4% similar) in 145 aa overlap (323-456:3-145)
300 310 320 330 340 350
pF1KE0 IEEGGYKRLCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTC
::.: : :::.:::.::. :: ::..
CCDS73 MAPVAITLV--SDGTRCLLARQSSFPKGMYSA
10 20 30
360 370 380 390 400
pF1KE0 LAGFIEPGETIEDAVRREVEEESGVKVGHVQYVACQPWPMPS-SLMIGCLALAV--STEI
:::: . ::..:...:::: :: :..: .:: : : ::.:: ::::.: : . .:::
CCDS73 LAGFCDIGESVEETIRREVAEEVGLEVESLQYYASQHWPFPSGSLMIACHATVKPGQTEI
40 50 60 70 80 90
410 420 430 440 450 460
pF1KE0 KVDKNEIEDARWFTREQVLDVLT-KG---KQQA----FFVPPSRAIAHQLIKHWIRINPN
.:. :.: : ::....: .: :: .:: :..::. ::.:::::.:.
CCDS73 QVNLRELETAAWFSHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISHQLIKEWVEKQTC
100 110 120 130 140 150
pF1KE0 L
CCDS73 SSLPA
462 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:04:45 2016 done: Fri Nov 4 03:04:46 2016
Total Scan time: 3.160 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]