Result of FASTA (ccds) for
pF1KE0072
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0072, 1340 aa
1>>>pF1KE0072 1340 - 1340 aa - 1340 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4003+/-0.00126; mu= 7.9273+/- 0.075
mean_var=154.6760+/-31.671, 0's: 0 Z-trim(105.4): 198 B-trim: 33 in 1/49
Lambda= 0.103125
statistics sampled from 8218 (8423) to 8218 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.602), E-opt: 0.2 (0.259), width: 16
Scan time: 5.260
The best scores are: opt bits E(32554)
CCDS76066.1 PCDH11Y gene_id:83259|Hs108|chrY (1340) 8774 1318.8 0
CCDS55461.1 PCDH11X gene_id:27328|Hs108|chrX (1310) 8378 1259.8 0
CCDS14777.1 PCDH11Y gene_id:83259|Hs108|chrY (1048) 6751 1017.7 0
CCDS14462.1 PCDH11X gene_id:27328|Hs108|chrX (1337) 6659 1004.1 0
CCDS55460.1 PCDH11X gene_id:27328|Hs108|chrX (1329) 6656 1003.6 0
CCDS55459.1 PCDH11X gene_id:27328|Hs108|chrX (1339) 6654 1003.3 0
CCDS14461.1 PCDH11X gene_id:27328|Hs108|chrX (1347) 6646 1002.2 0
CCDS14776.1 PCDH11Y gene_id:83259|Hs108|chrY (1037) 6628 999.4 0
CCDS55458.1 PCDH11X gene_id:27328|Hs108|chrX (1065) 6416 967.9 0
CCDS9443.1 PCDH9 gene_id:5101|Hs108|chr13 (1203) 4356 661.4 4.1e-189
CCDS9444.1 PCDH9 gene_id:5101|Hs108|chr13 (1237) 3957 602.1 3.1e-171
CCDS81770.1 PCDH9 gene_id:5101|Hs108|chr13 (1195) 3955 601.8 3.7e-171
CCDS81769.1 PCDH9 gene_id:5101|Hs108|chr13 (1032) 3935 598.8 2.5e-170
CCDS9442.2 PCDH20 gene_id:64881|Hs108|chr13 ( 951) 2007 311.9 5.3e-84
CCDS33971.1 PCDH7 gene_id:5099|Hs108|chr4 (1069) 1347 213.7 2.1e-54
CCDS75116.1 PCDH7 gene_id:5099|Hs108|chr4 (1072) 1345 213.4 2.6e-54
CCDS43375.1 PCDH1 gene_id:5097|Hs108|chr5 (1060) 1252 199.6 3.8e-50
CCDS4267.1 PCDH1 gene_id:5097|Hs108|chr5 (1237) 1251 199.5 4.8e-50
CCDS75193.1 PCDH18 gene_id:54510|Hs108|chr4 (1134) 1192 190.7 2e-47
CCDS34064.1 PCDH18 gene_id:54510|Hs108|chr4 (1135) 1192 190.7 2e-47
CCDS48141.1 PCDH19 gene_id:57526|Hs108|chrX (1100) 1117 179.5 4.3e-44
CCDS43976.1 PCDH19 gene_id:57526|Hs108|chrX (1101) 1117 179.5 4.3e-44
CCDS55462.1 PCDH19 gene_id:57526|Hs108|chrX (1148) 1117 179.5 4.5e-44
CCDS75343.1 PCDHGA10 gene_id:56106|Hs108|chr5 ( 850) 1098 176.7 2.5e-43
CCDS47292.1 PCDHGA10 gene_id:56106|Hs108|chr5 ( 936) 1098 176.7 2.7e-43
CCDS75349.1 PCDHGC4 gene_id:56098|Hs108|chr5 ( 871) 1097 176.5 2.8e-43
CCDS796.1 CELSR2 gene_id:1952|Hs108|chr1 (2923) 1107 178.2 2.8e-43
CCDS4262.1 PCDHGC4 gene_id:56098|Hs108|chr5 ( 938) 1097 176.5 3e-43
CCDS4269.1 PCDH12 gene_id:51294|Hs108|chr5 (1184) 1082 174.3 1.7e-42
CCDS75346.1 PCDHGA12 gene_id:26025|Hs108|chr5 ( 820) 1078 173.7 1.9e-42
CCDS4260.1 PCDHGA12 gene_id:26025|Hs108|chr5 ( 932) 1078 173.7 2.1e-42
CCDS75336.1 PCDHGA7 gene_id:56108|Hs108|chr5 ( 817) 1074 173.1 2.8e-42
CCDS54927.1 PCDHGA7 gene_id:56108|Hs108|chr5 ( 932) 1074 173.1 3.2e-42
CCDS47289.1 PCDHGA2 gene_id:56113|Hs108|chr5 ( 932) 1070 172.5 4.8e-42
CCDS75350.1 PCDHGC5 gene_id:56097|Hs108|chr5 ( 878) 1062 171.3 1e-41
CCDS4263.1 PCDHGC5 gene_id:56097|Hs108|chr5 ( 944) 1062 171.3 1.1e-41
CCDS47281.1 PCDHA6 gene_id:56142|Hs108|chr5 ( 950) 1058 170.7 1.7e-41
CCDS75329.1 PCDHGA3 gene_id:56112|Hs108|chr5 ( 829) 1053 170.0 2.5e-41
CCDS47290.1 PCDHGA3 gene_id:56112|Hs108|chr5 ( 932) 1053 170.0 2.8e-41
CCDS54922.1 PCDHGA1 gene_id:56114|Hs108|chr5 ( 931) 1052 169.8 3.1e-41
CCDS4241.1 PCDHAC1 gene_id:56135|Hs108|chr5 ( 963) 1048 169.2 4.8e-41
CCDS54930.1 PCDHGA11 gene_id:56105|Hs108|chr5 ( 750) 1045 168.7 5.2e-41
CCDS75345.1 PCDHGA11 gene_id:56105|Hs108|chr5 ( 837) 1045 168.8 5.8e-41
CCDS47294.1 PCDHGA11 gene_id:56105|Hs108|chr5 ( 935) 1045 168.8 6.3e-41
CCDS54918.1 PCDHA7 gene_id:56141|Hs108|chr5 ( 937) 1043 168.5 7.8e-41
CCDS75333.1 PCDHGA5 gene_id:56110|Hs108|chr5 ( 813) 1036 167.4 1.4e-40
CCDS54925.1 PCDHGA5 gene_id:56110|Hs108|chr5 ( 931) 1036 167.4 1.6e-40
CCDS75331.1 PCDHGA4 gene_id:56111|Hs108|chr5 ( 851) 1030 166.5 2.7e-40
CCDS54919.1 PCDHA8 gene_id:56140|Hs108|chr5 ( 950) 1030 166.6 3e-40
CCDS58979.2 PCDHGA4 gene_id:56111|Hs108|chr5 ( 962) 1030 166.6 3e-40
>>CCDS76066.1 PCDH11Y gene_id:83259|Hs108|chrY (1340 aa)
initn: 8774 init1: 8774 opt: 8774 Z-score: 7060.4 bits: 1318.8 E(32554): 0
Smith-Waterman score: 8774; 100.0% identity (100.0% similar) in 1340 aa overlap (1-1340:1-1340)
10 20 30 40 50 60
pF1KE0 MFRVGFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MFRVGFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 TIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 TIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 ARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 PENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 PENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 REEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 REEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 TQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 DADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 DADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 SAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 SAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 APPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 APPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 VFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 VFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPN
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 ISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 ISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE0 TNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 TNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHR
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE0 VLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 VLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE0 DYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 DYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMK
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE0 KKKKKKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 KKKKKKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTF
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE0 KPDSPDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 KPDSPDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDP
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE0 YSVSDCGYPVTTFEVPVSVHTRPSQRRVTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 YSVSDCGYPVTTFEVPVSVHTRPSQRRVTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGL
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE0 PLGYPQEEYFDRATPSNRTEGDGNSDPESTFIPGLKKEITVQPTVEEASDNCTQECLIYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 PLGYPQEEYFDRATPSNRTEGDGNSDPESTFIPGLKKEITVQPTVEEASDNCTQECLIYG
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE0 HSDACWMPASLDHSSSSQAQASALCHSPPLSQASTQHHSPPVTQTIVLCHSPPVTQTIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 HSDACWMPASLDHSSSSQAQASALCHSPPLSQASTQHHSPPVTQTIVLCHSPPVTQTIAL
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE0 CHSPPPIQVSALHHSPPLVQGTALHHSPPSAQASALCYSPPLAQAAAISHSSSLPQVIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 CHSPPPIQVSALHHSPPLVQGTALHHSPPSAQASALCYSPPLAQAAAISHSSSLPQVIAL
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE0 HRSQAQSSVSLQQGWVQGANGLCSVDQGVQGSATSQFYTMSERLHPSDDSIKVIPLTTFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 HRSQAQSSVSLQQGWVQGANGLCSVDQGVQGSATSQFYTMSERLHPSDDSIKVIPLTTFA
1270 1280 1290 1300 1310 1320
1330 1340
pF1KE0 PRQQARPSRGDSPIMETHPL
::::::::::::::::::::
CCDS76 PRQQARPSRGDSPIMETHPL
1330 1340
>>CCDS55461.1 PCDH11X gene_id:27328|Hs108|chrX (1310 aa)
initn: 8040 init1: 6914 opt: 8378 Z-score: 6742.1 bits: 1259.8 E(32554): 0
Smith-Waterman score: 8378; 98.0% identity (98.9% similar) in 1308 aa overlap (35-1340:3-1310)
10 20 30 40 50 60
pF1KE0 GFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNYTIRE
::::::::::::.:::::::::::::::::
CCDS55 MDLLSGTYIFAVLLACVVFHSGAQEKNYTIRE
10 20 30
70 80 90 100 110 120
pF1KE0 EIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARID
:.:::::::.:::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS55 EMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARID
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE0 REKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 REKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE0 AINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE0 DTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLH
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE0 ATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDG
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE0 GLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE0 NGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAML
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS55 NGRVTCFTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAML
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE0 FIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPE
::::::::::::::::::::::::::::::::: :::: ::::::::.::::::::::::
CCDS55 FIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPE
460 470 480 490 500 510
550 560 570 580 590 600
pF1KE0 FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTH
:::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTH
520 530 540 550 560 570
610 620 630 640 650 660
pF1KE0 NEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFD
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFD
580 590 600 610 620 630
670 680 690 700 710 720
pF1KE0 REKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPG
::::::::::::::::::::::::::::::::::::::::::::: : ::::::::::::
CCDS55 REKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPG
640 650 660 670 680 690
730 740 750 760 770 780
pF1KE0 TVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVK
700 710 720 730 740 750
790 800 810 820 830 840
pF1KE0 ANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVK
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS55 ANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVK
760 770 780 790 800 810
850 860 870 880 890 900
pF1KE0 ILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMKKKKK
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
CCDS55 ILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQNSEWATPNPENRQMIMMKKKKK
820 830 840 850 860 870
910 920 930 940 950 960
pF1KE0 KKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDS
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KKKHSPKNLLLNFVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDS
880 890 900 910 920 930
970 980 990 1000 1010 1020
pF1KE0 PDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDPYSVS
::::::::::::::::::::::::: :::::::::::::::::::::.::::::::::::
CCDS55 PDLARHYKSASPQPAFQIQPETPLNSKHHIIQELPLDNTFVACDSISKCSSSSSDPYSVS
940 950 960 970 980 990
1030 1040 1050 1060 1070 1080
pF1KE0 DCGYPVTTFEVPVSVHTRPSQRRVTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGLPLGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DCGYPVTTFEVPVSVHTRPSQRRVTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGLPLGY
1000 1010 1020 1030 1040 1050
1090 1100 1110 1120 1130 1140
pF1KE0 PQEEYFDRATPSNRTEGDGNSDPESTFIPGLKK--EITVQPTVEEASDNCTQECLIYGHS
::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::
CCDS55 PQEEYFDRATPSNRTEGDGNSDPESTFIPGLKKAAEITVQPTVEEASDNCTQECLIYGHS
1060 1070 1080 1090 1100 1110
1150 1160 1170 1180 1190 1200
pF1KE0 DACWMPASLDHSSSSQAQASALCHSPPLSQASTQHHSPPVTQTIVLCHSPPVTQTIALCH
:::::::::::::::::::::::::::::::::::::: :::::.:::::::::::::::
CCDS55 DACWMPASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCH
1120 1130 1140 1150 1160 1170
1210 1220 1230 1240 1250 1260
pF1KE0 SPPPIQVSALHHSPPLVQGTALHHSPPSAQASALCYSPPLAQAAAISHSSSLPQVIALHR
::::::::::::::::::.::::::::::::::::::::::::::::::: :::::::::
CCDS55 SPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSSPLPQVIALHR
1180 1190 1200 1210 1220 1230
1270 1280 1290 1300 1310 1320
pF1KE0 SQAQSSVSLQQGWVQGANGLCSVDQGVQGSATSQFYTMSERLHPSDDSIKVIPLTTFAPR
:::::::::::::::::.:::::::::::::::::::::::::::::::::::::::.::
CCDS55 SQAQSSVSLQQGWVQGADGLCSVDQGVQGSATSQFYTMSERLHPSDDSIKVIPLTTFTPR
1240 1250 1260 1270 1280 1290
1330 1340
pF1KE0 QQARPSRGDSPIMETHPL
:::::::::::::: :::
CCDS55 QQARPSRGDSPIMEEHPL
1300 1310
>>CCDS14777.1 PCDH11Y gene_id:83259|Hs108|chrY (1048 aa)
initn: 7308 init1: 6751 opt: 6751 Z-score: 5435.4 bits: 1017.7 E(32554): 0
Smith-Waterman score: 6751; 99.7% identity (99.9% similar) in 1047 aa overlap (1-1047:1-1047)
10 20 30 40 50 60
pF1KE0 MFRVGFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MFRVGFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 TIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 PENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 PENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 REEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 REEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 DADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 SAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 APPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 APPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 VFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPN
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 ISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE0 TNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHR
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE0 VLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE0 DYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMK
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE0 KKKKKKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KKKKKKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTF
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE0 KPDSPDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KPDSPDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDP
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE0 YSVSDCGYPVTTFEVPVSVHTRPSQRRVTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGL
:::::::::::::::::::::::.. :
CCDS14 YSVSDCGYPVTTFEVPVSVHTRPTDSRT
1030 1040
>>CCDS14462.1 PCDH11X gene_id:27328|Hs108|chrX (1337 aa)
initn: 7881 init1: 6416 opt: 6659 Z-score: 5359.8 bits: 1004.1 E(32554): 0
Smith-Waterman score: 8314; 96.0% identity (96.9% similar) in 1335 aa overlap (35-1340:3-1337)
10 20 30 40 50 60
pF1KE0 GFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNYTIRE
::::::::::::.:::::::::::::::::
CCDS14 MDLLSGTYIFAVLLACVVFHSGAQEKNYTIRE
10 20 30
70 80 90 100 110 120
pF1KE0 EIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARID
:.:::::::.:::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS14 EMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARID
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE0 REKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 REKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE0 AINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 AINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE0 DTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLH
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE0 ATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDG
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE0 GLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE0 NGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAML
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS14 NGRVTCFTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAML
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE0 FIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPE
::::::::::::::::::::::::::::::::: :::: ::::::::.::::::::::::
CCDS14 FIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPE
460 470 480 490 500 510
550 560 570 580 590 600
pF1KE0 FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTH
:::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTH
520 530 540 550 560 570
610 620 630 640 650 660
pF1KE0 NEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFD
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFD
580 590 600 610 620 630
670 680 690 700 710 720
pF1KE0 REKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPG
::::::::::::::::::::::::::::::::::::::::::::: : ::::::::::::
CCDS14 REKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPG
640 650 660 670 680 690
730 740 750 760 770 780
pF1KE0 TVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVK
700 710 720 730 740 750
790 800 810 820 830 840
pF1KE0 ANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVK
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS14 ANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVK
760 770 780 790 800 810
850 860 870 880 890 900
pF1KE0 ILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMKKKKK
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
CCDS14 ILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQNSEWATPNPENRQMIMMKKKKK
820 830 840 850 860 870
910 920 930 940 950 960
pF1KE0 KKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDS
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KKKHSPKNLLLNFVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDS
880 890 900 910 920 930
970 980 990 1000 1010 1020
pF1KE0 PDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDPYSVS
::::::::::::::::::::::::: :::::::::::::::::::::.::::::::::::
CCDS14 PDLARHYKSASPQPAFQIQPETPLNSKHHIIQELPLDNTFVACDSISKCSSSSSDPYSVS
940 950 960 970 980 990
1030 1040 1050
pF1KE0 DCGYPVTTFEVPVSVHTRP---------------------------SQRRVTFHLPEGSQ
::::::::::::::::::: ::::::::::::::
CCDS14 DCGYPVTTFEVPVSVHTRPPMKEVVRSCTPMKESTTMEIWIHPQPQSQRRVTFHLPEGSQ
1000 1010 1020 1030 1040 1050
1060 1070 1080 1090 1100 1110
pF1KE0 ESSSDGGLGDHDAGSLTSTSHGLPLGYPQEEYFDRATPSNRTEGDGNSDPESTFIPGLKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ESSSDGGLGDHDAGSLTSTSHGLPLGYPQEEYFDRATPSNRTEGDGNSDPESTFIPGLKK
1060 1070 1080 1090 1100 1110
1120 1130 1140 1150 1160 1170
pF1KE0 --EITVQPTVEEASDNCTQECLIYGHSDACWMPASLDHSSSSQAQASALCHSPPLSQAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 AAEITVQPTVEEASDNCTQECLIYGHSDACWMPASLDHSSSSQAQASALCHSPPLSQAST
1120 1130 1140 1150 1160 1170
1180 1190 1200 1210 1220 1230
pF1KE0 QHHSPPVTQTIVLCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQGTALHHSPPSAQASA
::::: :::::.:::::::::::::::::::::::::::::::::.::::::::::::::
CCDS14 QHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASA
1180 1190 1200 1210 1220 1230
1240 1250 1260 1270 1280 1290
pF1KE0 LCYSPPLAQAAAISHSSSLPQVIALHRSQAQSSVSLQQGWVQGANGLCSVDQGVQGSATS
::::::::::::::::: ::::::::::::::::::::::::::.:::::::::::::::
CCDS14 LCYSPPLAQAAAISHSSPLPQVIALHRSQAQSSVSLQQGWVQGADGLCSVDQGVQGSATS
1240 1250 1260 1270 1280 1290
1300 1310 1320 1330 1340
pF1KE0 QFYTMSERLHPSDDSIKVIPLTTFAPRQQARPSRGDSPIMETHPL
::::::::::::::::::::::::.:::::::::::::::: :::
CCDS14 QFYTMSERLHPSDDSIKVIPLTTFTPRQQARPSRGDSPIMEEHPL
1300 1310 1320 1330
>>CCDS55460.1 PCDH11X gene_id:27328|Hs108|chrX (1329 aa)
initn: 7881 init1: 6416 opt: 6656 Z-score: 5357.4 bits: 1003.6 E(32554): 0
Smith-Waterman score: 8257; 95.6% identity (96.5% similar) in 1333 aa overlap (35-1340:3-1329)
10 20 30 40 50 60
pF1KE0 GFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNYTIRE
::::::::::::.:::::::::::::::::
CCDS55 MDLLSGTYIFAVLLACVVFHSGAQEKNYTIRE
10 20 30
70 80 90 100 110 120
pF1KE0 EIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARID
:.:::::::.:::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS55 EMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARID
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE0 REKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 REKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE0 AINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE0 DTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLH
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE0 ATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDG
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE0 GLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE0 NGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAML
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS55 NGRVTCFTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAML
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE0 FIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPE
::::::::::::::::::::::::::::::::: :::: ::::::::.::::::::::::
CCDS55 FIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPE
460 470 480 490 500 510
550 560 570 580 590 600
pF1KE0 FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTH
:::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTH
520 530 540 550 560 570
610 620 630 640 650 660
pF1KE0 NEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFD
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFD
580 590 600 610 620 630
670 680 690 700 710 720
pF1KE0 REKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPG
::::::::::::::::::::::::::::::::::::::::::::: : ::::::::::::
CCDS55 REKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPG
640 650 660 670 680 690
730 740 750 760 770 780
pF1KE0 TVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVK
700 710 720 730 740 750
790 800 810 820 830 840
pF1KE0 ANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVK
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS55 ANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVK
760 770 780 790 800 810
850 860 870 880 890 900
pF1KE0 ILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMKKKKK
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
CCDS55 ILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQNSEWATPNPENRQMIMMKKKKK
820 830 840 850 860 870
910 920 930 940 950 960
pF1KE0 KKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDS
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KKKHSPKNLLLNFVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDS
880 890 900 910 920 930
970 980 990 1000 1010 1020
pF1KE0 PDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDPYSVS
::::::::::::::::::::::::: :::::::::::::::::::::.::::::::::::
CCDS55 PDLARHYKSASPQPAFQIQPETPLNSKHHIIQELPLDNTFVACDSISKCSSSSSDPYSVS
940 950 960 970 980 990
1030 1040 1050
pF1KE0 DCGYPVTTFEVPVSVHTRP---------------------------SQRRVTFHLPEGSQ
::::::::::::::::::: ::::::::::::::
CCDS55 DCGYPVTTFEVPVSVHTRPPMKEVVRSCTPMKESTTMEIWIHPQPQSQRRVTFHLPEGSQ
1000 1010 1020 1030 1040 1050
1060 1070 1080 1090 1100 1110
pF1KE0 ESSSDGGLGDHDAGSLTSTSHGLPLGYPQEEYFDRATPSNRTEGDGNSDPESTFIPGLKK
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ESSSDGGLGDHDAGSLTSTSHGLPLGYPQEEYFDRATPSNRTEGDGNSDPEST------A
1060 1070 1080 1090 1100
1120 1130 1140 1150 1160 1170
pF1KE0 EITVQPTVEEASDNCTQECLIYGHSDACWMPASLDHSSSSQAQASALCHSPPLSQASTQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EITVQPTVEEASDNCTQECLIYGHSDACWMPASLDHSSSSQAQASALCHSPPLSQASTQH
1110 1120 1130 1140 1150 1160
1180 1190 1200 1210 1220 1230
pF1KE0 HSPPVTQTIVLCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQGTALHHSPPSAQASALC
::: :::::.:::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS55 HSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALC
1170 1180 1190 1200 1210 1220
1240 1250 1260 1270 1280 1290
pF1KE0 YSPPLAQAAAISHSSSLPQVIALHRSQAQSSVSLQQGWVQGANGLCSVDQGVQGSATSQF
::::::::::::::: ::::::::::::::::::::::::::.:::::::::::::::::
CCDS55 YSPPLAQAAAISHSSPLPQVIALHRSQAQSSVSLQQGWVQGADGLCSVDQGVQGSATSQF
1230 1240 1250 1260 1270 1280
1300 1310 1320 1330 1340
pF1KE0 YTMSERLHPSDDSIKVIPLTTFAPRQQARPSRGDSPIMETHPL
::::::::::::::::::::::.:::::::::::::::: :::
CCDS55 YTMSERLHPSDDSIKVIPLTTFTPRQQARPSRGDSPIMEEHPL
1290 1300 1310 1320
>>CCDS55459.1 PCDH11X gene_id:27328|Hs108|chrX (1339 aa)
initn: 7881 init1: 6416 opt: 6654 Z-score: 5355.8 bits: 1003.3 E(32554): 0
Smith-Waterman score: 8237; 94.9% identity (95.8% similar) in 1343 aa overlap (35-1340:3-1339)
10 20 30 40 50 60
pF1KE0 GFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNYTIRE
::::::::::::.:::::::::::::::::
CCDS55 MDLLSGTYIFAVLLACVVFHSGAQEKNYTIRE
10 20 30
70 80 90 100 110 120
pF1KE0 EIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARID
:.:::::::.:::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS55 EMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARID
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE0 REKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 REKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE0 AINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE0 DTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLH
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE0 ATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDG
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE0 GLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE0 NGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAML
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS55 NGRVTCFTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAML
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE0 FIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPE
::::::::::::::::::::::::::::::::: :::: ::::::::.::::::::::::
CCDS55 FIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPE
460 470 480 490 500 510
550 560 570 580 590 600
pF1KE0 FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTH
:::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTH
520 530 540 550 560 570
610 620 630 640 650 660
pF1KE0 NEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFD
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFD
580 590 600 610 620 630
670 680 690 700 710 720
pF1KE0 REKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPG
::::::::::::::::::::::::::::::::::::::::::::: : ::::::::::::
CCDS55 REKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPG
640 650 660 670 680 690
730 740 750 760 770 780
pF1KE0 TVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVK
700 710 720 730 740 750
790 800 810 820 830 840
pF1KE0 ANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVK
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS55 ANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVK
760 770 780 790 800 810
850 860 870 880 890 900
pF1KE0 ILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMKKKKK
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
CCDS55 ILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQNSEWATPNPENRQMIMMKKKKK
820 830 840 850 860 870
910 920 930 940 950 960
pF1KE0 KKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDS
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KKKHSPKNLLLNFVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDS
880 890 900 910 920 930
970 980 990 1000 1010 1020
pF1KE0 PDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDPYSVS
::::::::::::::::::::::::: :::::::::::::::::::::.::::::::::::
CCDS55 PDLARHYKSASPQPAFQIQPETPLNSKHHIIQELPLDNTFVACDSISKCSSSSSDPYSVS
940 950 960 970 980 990
1030 1040
pF1KE0 DCGYPVTTFEVPVSVHTRP-------------------------------------SQRR
::::::::::::::::::: ::::
CCDS55 DCGYPVTTFEVPVSVHTRPPMKEVVRSCTPMKESTTMEIWIHPQPQRKSEGKVAGKSQRR
1000 1010 1020 1030 1040 1050
1050 1060 1070 1080 1090 1100
pF1KE0 VTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGLPLGYPQEEYFDRATPSNRTEGDGNSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGLPLGYPQEEYFDRATPSNRTEGDGNSDP
1060 1070 1080 1090 1100 1110
1110 1120 1130 1140 1150 1160
pF1KE0 ESTFIPGLKKEITVQPTVEEASDNCTQECLIYGHSDACWMPASLDHSSSSQAQASALCHS
::: ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EST------AEITVQPTVEEASDNCTQECLIYGHSDACWMPASLDHSSSSQAQASALCHS
1120 1130 1140 1150 1160
1170 1180 1190 1200 1210 1220
pF1KE0 PPLSQASTQHHSPPVTQTIVLCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQGTALHHS
::::::::::::: :::::.:::::::::::::::::::::::::::::::::.::::::
CCDS55 PPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALHHS
1170 1180 1190 1200 1210 1220
1230 1240 1250 1260 1270 1280
pF1KE0 PPSAQASALCYSPPLAQAAAISHSSSLPQVIALHRSQAQSSVSLQQGWVQGANGLCSVDQ
::::::::::::::::::::::::: ::::::::::::::::::::::::::.:::::::
CCDS55 PPSAQASALCYSPPLAQAAAISHSSPLPQVIALHRSQAQSSVSLQQGWVQGADGLCSVDQ
1230 1240 1250 1260 1270 1280
1290 1300 1310 1320 1330 1340
pF1KE0 GVQGSATSQFYTMSERLHPSDDSIKVIPLTTFAPRQQARPSRGDSPIMETHPL
::::::::::::::::::::::::::::::::.:::::::::::::::: :::
CCDS55 GVQGSATSQFYTMSERLHPSDDSIKVIPLTTFTPRQQARPSRGDSPIMEEHPL
1290 1300 1310 1320 1330
>>CCDS14461.1 PCDH11X gene_id:27328|Hs108|chrX (1347 aa)
initn: 7881 init1: 6416 opt: 6646 Z-score: 5349.3 bits: 1002.2 E(32554): 0
Smith-Waterman score: 8252; 95.4% identity (96.3% similar) in 1338 aa overlap (35-1333:3-1340)
10 20 30 40 50 60
pF1KE0 GFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNYTIRE
::::::::::::.:::::::::::::::::
CCDS14 MDLLSGTYIFAVLLACVVFHSGAQEKNYTIRE
10 20 30
70 80 90 100 110 120
pF1KE0 EIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARID
:.:::::::.:::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS14 EMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARID
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE0 REKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 REKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE0 AINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 AINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE0 DTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLH
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE0 ATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDG
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE0 GLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE0 NGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAML
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS14 NGRVTCFTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAML
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE0 FIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPE
::::::::::::::::::::::::::::::::: :::: ::::::::.::::::::::::
CCDS14 FIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPE
460 470 480 490 500 510
550 560 570 580 590 600
pF1KE0 FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTH
:::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTH
520 530 540 550 560 570
610 620 630 640 650 660
pF1KE0 NEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFD
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFD
580 590 600 610 620 630
670 680 690 700 710 720
pF1KE0 REKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPG
::::::::::::::::::::::::::::::::::::::::::::: : ::::::::::::
CCDS14 REKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPG
640 650 660 670 680 690
730 740 750 760 770 780
pF1KE0 TVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVK
700 710 720 730 740 750
790 800 810 820 830 840
pF1KE0 ANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVK
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS14 ANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVK
760 770 780 790 800 810
850 860 870 880 890 900
pF1KE0 ILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMKKKKK
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
CCDS14 ILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQNSEWATPNPENRQMIMMKKKKK
820 830 840 850 860 870
910 920 930 940 950 960
pF1KE0 KKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDS
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KKKHSPKNLLLNFVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDS
880 890 900 910 920 930
970 980 990 1000 1010 1020
pF1KE0 PDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDPYSVS
::::::::::::::::::::::::: :::::::::::::::::::::.::::::::::::
CCDS14 PDLARHYKSASPQPAFQIQPETPLNSKHHIIQELPLDNTFVACDSISKCSSSSSDPYSVS
940 950 960 970 980 990
1030 1040
pF1KE0 DCGYPVTTFEVPVSVHTRP-------------------------------------SQRR
::::::::::::::::::: ::::
CCDS14 DCGYPVTTFEVPVSVHTRPPMKEVVRSCTPMKESTTMEIWIHPQPQRKSEGKVAGKSQRR
1000 1010 1020 1030 1040 1050
1050 1060 1070 1080 1090 1100
pF1KE0 VTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGLPLGYPQEEYFDRATPSNRTEGDGNSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGLPLGYPQEEYFDRATPSNRTEGDGNSDP
1060 1070 1080 1090 1100 1110
1110 1120 1130 1140 1150 1160
pF1KE0 ESTFIPGLKK--EITVQPTVEEASDNCTQECLIYGHSDACWMPASLDHSSSSQAQASALC
:::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ESTFIPGLKKAAEITVQPTVEEASDNCTQECLIYGHSDACWMPASLDHSSSSQAQASALC
1120 1130 1140 1150 1160 1170
1170 1180 1190 1200 1210 1220
pF1KE0 HSPPLSQASTQHHSPPVTQTIVLCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQGTALH
::::::::::::::: :::::.:::::::::::::::::::::::::::::::::.::::
CCDS14 HSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIALCHSPPPIQVSALHHSPPLVQATALH
1180 1190 1200 1210 1220 1230
1230 1240 1250 1260 1270 1280
pF1KE0 HSPPSAQASALCYSPPLAQAAAISHSSSLPQVIALHRSQAQSSVSLQQGWVQGANGLCSV
::::::::::::::::::::::::::: ::::::::::::::::::::::::::.:::::
CCDS14 HSPPSAQASALCYSPPLAQAAAISHSSPLPQVIALHRSQAQSSVSLQQGWVQGADGLCSV
1240 1250 1260 1270 1280 1290
1290 1300 1310 1320 1330 1340
pF1KE0 DQGVQGSATSQFYTMSERLHPSDDSIKVIPLTTFAPRQQARPSRGDSPIMETHPL
::::::::::::::::::::::::::::::::::.:::::::::::::
CCDS14 DQGVQGSATSQFYTMSERLHPSDDSIKVIPLTTFTPRQQARPSRGDSPIMEEHPL
1300 1310 1320 1330 1340
>>CCDS14776.1 PCDH11Y gene_id:83259|Hs108|chrY (1037 aa)
initn: 7027 init1: 6628 opt: 6628 Z-score: 5336.6 bits: 999.4 E(32554): 0
Smith-Waterman score: 6628; 99.7% identity (99.9% similar) in 1026 aa overlap (22-1047:11-1036)
10 20 30 40 50 60
pF1KE0 MFRVGFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNY
:::::::::::::::::::::::::::::::::::::::
CCDS14 MTVGFNSDISSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNY
10 20 30 40
70 80 90 100 110 120
pF1KE0 TIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTG
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE0 ARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISI
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE0 PENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 PENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELD
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE0 REEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 REEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSV
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE0 TQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVL
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE0 ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDK
350 360 370 380 390 400
430 440 450 460 470 480
pF1KE0 DADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQ
410 420 430 440 450 460
490 500 510 520 530 540
pF1KE0 SAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPD
470 480 490 500 510 520
550 560 570 580 590 600
pF1KE0 APPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 APPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSP
530 540 550 560 570 580
610 620 630 640 650 660
pF1KE0 VFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPN
590 600 610 620 630 640
670 680 690 700 710 720
pF1KE0 ISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPS
650 660 670 680 690 700
730 740 750 760 770 780
pF1KE0 TNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHR
710 720 730 740 750 760
790 800 810 820 830 840
pF1KE0 VLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTS
770 780 790 800 810 820
850 860 870 880 890 900
pF1KE0 DYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMK
830 840 850 860 870 880
910 920 930 940 950 960
pF1KE0 KKKKKKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KKKKKKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTF
890 900 910 920 930 940
970 980 990 1000 1010 1020
pF1KE0 KPDSPDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KPDSPDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDP
950 960 970 980 990 1000
1030 1040 1050 1060 1070 1080
pF1KE0 YSVSDCGYPVTTFEVPVSVHTRPSQRRVTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGL
:::::::::::::::::::::::.. :
CCDS14 YSVSDCGYPVTTFEVPVSVHTRPTDSRT
1010 1020 1030
>>CCDS55458.1 PCDH11X gene_id:27328|Hs108|chrX (1065 aa)
initn: 6980 init1: 6416 opt: 6416 Z-score: 5165.9 bits: 967.9 E(32554): 0
Smith-Waterman score: 6416; 97.9% identity (99.0% similar) in 1014 aa overlap (35-1048:3-1016)
10 20 30 40 50 60
pF1KE0 GFLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKNYTIRE
::::::::::::.:::::::::::::::::
CCDS55 MDLLSGTYIFAVLLACVVFHSGAQEKNYTIRE
10 20 30
70 80 90 100 110 120
pF1KE0 EIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARID
:.:::::::.:::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS55 EMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARID
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE0 REKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 REKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE0 AINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE0 DTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLH
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE0 ATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDG
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE0 GLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE0 NGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAML
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS55 NGRVTCFTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAML
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE0 FIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPE
::::::::::::::::::::::::::::::::: :::: ::::::::.::::::::::::
CCDS55 FIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSAMDADSGPNAKINYLLGPDAPPE
460 470 480 490 500 510
550 560 570 580 590 600
pF1KE0 FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTH
:::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTH
520 530 540 550 560 570
610 620 630 640 650 660
pF1KE0 NEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFD
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFD
580 590 600 610 620 630
670 680 690 700 710 720
pF1KE0 REKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPG
::::::::::::::::::::::::::::::::::::::::::::: : ::::::::::::
CCDS55 REKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPG
640 650 660 670 680 690
730 740 750 760 770 780
pF1KE0 TVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVK
700 710 720 730 740 750
790 800 810 820 830 840
pF1KE0 ANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSPTSDYVK
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS55 ANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVK
760 770 780 790 800 810
850 860 870 880 890 900
pF1KE0 ILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMMKKKKK
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
CCDS55 ILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQNSEWATPNPENRQMIMMKKKKK
820 830 840 850 860 870
910 920 930 940 950 960
pF1KE0 KKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDS
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KKKHSPKNLLLNFVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNWVTTPTTFKPDS
880 890 900 910 920 930
970 980 990 1000 1010 1020
pF1KE0 PDLARHYKSASPQPAFQIQPETPLNLKHHIIQELPLDNTFVACDSISNCSSSSSDPYSVS
::::::::::::::::::::::::: :::::::::::::::::::::.::::::::::::
CCDS55 PDLARHYKSASPQPAFQIQPETPLNSKHHIIQELPLDNTFVACDSISKCSSSSSDPYSVS
940 950 960 970 980 990
1030 1040 1050 1060 1070 1080
pF1KE0 DCGYPVTTFEVPVSVHTRPSQRRVTFHLPEGSQESSSDGGLGDHDAGSLTSTSHGLPLGY
::::::::::::::::::: ...:
CCDS55 DCGYPVTTFEVPVSVHTRPPMKEVVRSCTPMKESTTMEIWIHPQPQRKSEGKVAGKTVLT
1000 1010 1020 1030 1040 1050
>>CCDS9443.1 PCDH9 gene_id:5101|Hs108|chr13 (1203 aa)
initn: 3487 init1: 1792 opt: 4356 Z-score: 3508.7 bits: 661.4 E(32554): 4.1e-189
Smith-Waterman score: 4356; 58.0% identity (83.0% similar) in 1126 aa overlap (36-1151:3-1114)
10 20 30 40 50 60
pF1KE0 FLIISSSSSLSPLLLVSVVRVNTTNCHKCLLSGTYIFAVLLVCVVFHSG-AQEKNYTIRE
: :..:.:..:. . :. ::: :::::
CCDS94 MDLRDFYLLAALIACLRLDSAIAQELIYTIRE
10 20 30
70 80 90 100 110 120
pF1KE0 EIPENVLIGNLLKDLNLSLIPNKSLTT-TMQFKLVYKTGDVPLIRIEEDTGEIFTTGARI
:.:::: :::. ::::.: : . :. .. ..:: :.::.::... .:::::::. ::
CCDS94 ELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRI
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE0 DREKLCAGIPRDEH--CFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIP
:::::::: :. ::.:.::.:::...:::.::.....: :::::.::. :::::::
CCDS94 DREKLCAGASYAEENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIP
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE0 ENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDR
::. :::.. .:.:.:::.:.::::.:::...:..::::..:::::.: ::::::..:::
CCDS94 ENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDR
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE0 EEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVT
:.:::::::.:::::: ::.::::::::.:.:.:::.::::: ..:: :::::::::::
CCDS94 EQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVI
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE0 QLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLA
:::::::::: ::.:.. :. :. ..::: :: ::::::... :::::: ::. :::
CCDS94 QLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLA
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE0 SDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKD
:::. :::: : .:::::::: :.::.:::..:.: :: :::. :.:::::::::.:::
CCDS94 SDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKD
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE0 ADHNGRVTCFTDHEIPFRLRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQS
.: ::.: :: ..:.::.:. :..::.:::... ::::.:::...:..:.:.::: :::.
CCDS94 TDVNGKVICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQT
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE0 AMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDA
:.. .:..::::: :.:.: . .:. ::: :. : .:::: ::: ::.: : :::.:
CCDS94 ALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNA
460 470 480 490 500 510
550 560 570 580 590 600
pF1KE0 PPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPV
:.:::.::.::. . .:::......::. :.:::.::: :...:.:...:.:::::
CCDS94 S-FFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPK
520 530 540 550 560 570
610 620 630 640 650 660
pF1KE0 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI
::::...:.: ::::...:::.::::: : :.:.:::::::..::.:..: .:::. :.
CCDS94 FTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNV
580 590 600 610 620 630
670 680 690 700 710 720
pF1KE0 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPST
:::::.: :::: ::: :::. :::.:::::::.:::::.:: : :: : :..:: :.
CCDS94 SFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSA
640 650 660 670 680 690
730 740 750 760 770 780
pF1KE0 NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRV
::.:: .:.::: :::::::..:.::.::.. :: :: :::::: :: ::.::::.
CCDS94 IPGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRL
700 710 720 730 740 750
790 800 810 820 830
pF1KE0 LVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVSSP--T
.:. .::: : :: ..:.: :.::... ::. : .:.:...:.:. : :.: :.: .
CCDS94 VVNISDLGYPKSLHTLVLVFLYVNDTAGNASYIYDLIRRTMETPLDRN--IGDSSQPYQN
760 770 780 790 800
840 850 860 870 880 890
pF1KE0 SDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNMQNSEWATPNPENRQMIMM
::. :..: .::...:.::::.:..::::.: ..::::.. :..:: .:: ::.:
CCDS94 EDYLTIMIAIIAGAMVVIVVIFVTVLVRCRHASRFKAAQRSKQGAEWMSPNQENKQN---
810 820 830 840 850 860
900 910 920 930 940 950
pF1KE0 KKKKKKKKHSPKNLLLNVVTIEETKADDVDSDGNRVTLDLPIDLEEQTMGKYNW-VTTPT
::::.::..:::. ::: :::::.: ::. . :..:: .::::..:...: . ::
CCDS94 KKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPINGTISLPAELEEQSIGRFDWGPAPPT
870 880 890 900 910 920
960 970 980 990 1000 1010
pF1KE0 TFKPDSPDLARHYKSASPQPAFQIQPETPLNLK-HHIIQELPLDNTFVA-CDSISNCSSS
::::.:::::.:::::::::::...:.::...: ::.:::::::::::. ::..:. ::.
CCDS94 TFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKKHHVIQELPLDNTFVGGCDTLSKRSST
930 940 950 960 970 980
1020 1030 1040 1050 1060 1070
pF1KE0 SSDPYSVSDCGYPVTTFEVPVSVHTRPSQRRVTFHLPEGSQESSSDGGLGDHD-AGSLTS
::: .:.:.:. :.. .::: ::::::::::.::::: ::.:::::. .:: :
CCDS94 SSDHFSASECSSQ-GGFKTKGPLHTRQSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTL
990 1000 1010 1020 1030 1040
1080 1090 1100 1110 1120 1130
pF1KE0 TSHGLPLGYPQEEYFDRATPSNRTEGDGNSDPESTFIPGLKKEITVQPTVEEASDNCTQE
:: ::: ::.:..:.:.:..:::.::::::.: : . . ::.. ::::
CCDS94 ISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRG-------LAEATEMCTQE
1050 1060 1070 1080 1090
1140 1150 1160 1170 1180 1190
pF1KE0 CLIYGHSDACWMPASLDHSSSSQAQASALCHSPPLSQASTQHHSPPVTQTIVLCHSPPVT
::. :::: :::: .:
CCDS94 CLVLGHSDNCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQF
1100 1110 1120 1130 1140 1150
1340 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 04:16:59 2016 done: Fri Nov 4 04:17:00 2016
Total Scan time: 5.260 Total Display time: 0.760
Function used was FASTA [36.3.4 Apr, 2011]