Result of FASTA (omim) for
pF1KB9900
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9900, 374 aa
1>>>pF1KB9900 374 - 374 aa - 374 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8103+/-0.000291; mu= 20.6374+/- 0.018
mean_var=79.5664+/-16.520, 0's: 0 Z-trim(119.1): 40 B-trim: 198 in 1/52
Lambda= 0.143784
statistics sampled from 32702 (32746) to 32702 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.744), E-opt: 0.2 (0.384), width: 16
Scan time: 7.960
The best scores are: opt bits E(85289)
NP_002025 (OMIM: 136835) alpha-(1,3)-fucosyltransf ( 374) 2671 563.2 3.5e-160
NP_001091109 (OMIM: 111100) galactoside 3(4)-L-fuc ( 361) 2058 436.0 6.5e-122
NP_001091108 (OMIM: 111100) galactoside 3(4)-L-fuc ( 361) 2058 436.0 6.5e-122
NP_001091110 (OMIM: 111100) galactoside 3(4)-L-fuc ( 361) 2058 436.0 6.5e-122
NP_000140 (OMIM: 111100) galactoside 3(4)-L-fucosy ( 361) 2058 436.0 6.5e-122
XP_011526169 (OMIM: 111100) PREDICTED: galactoside ( 361) 2039 432.1 1e-120
XP_011526167 (OMIM: 111100) PREDICTED: galactoside ( 361) 2039 432.1 1e-120
XP_011526168 (OMIM: 111100) PREDICTED: galactoside ( 361) 2039 432.1 1e-120
XP_011526172 (OMIM: 136836,613852) PREDICTED: alph ( 359) 2029 430.0 4.2e-120
XP_011526181 (OMIM: 136836,613852) PREDICTED: alph ( 359) 2029 430.0 4.2e-120
XP_011526180 (OMIM: 136836,613852) PREDICTED: alph ( 359) 2029 430.0 4.2e-120
XP_011526174 (OMIM: 136836,613852) PREDICTED: alph ( 359) 2029 430.0 4.2e-120
XP_011526178 (OMIM: 136836,613852) PREDICTED: alph ( 359) 2029 430.0 4.2e-120
XP_011526171 (OMIM: 136836,613852) PREDICTED: alph ( 359) 2029 430.0 4.2e-120
XP_005259583 (OMIM: 136836,613852) PREDICTED: alph ( 359) 2029 430.0 4.2e-120
XP_011526176 (OMIM: 136836,613852) PREDICTED: alph ( 359) 2029 430.0 4.2e-120
NP_000141 (OMIM: 136836,613852) alpha-(1,3)-fucosy ( 359) 2029 430.0 4.2e-120
XP_011526170 (OMIM: 136836,613852) PREDICTED: alph ( 359) 2029 430.0 4.2e-120
NP_001035791 (OMIM: 136836,613852) alpha-(1,3)-fuc ( 359) 2029 430.0 4.2e-120
XP_011526177 (OMIM: 136836,613852) PREDICTED: alph ( 359) 2029 430.0 4.2e-120
XP_011526175 (OMIM: 136836,613852) PREDICTED: alph ( 359) 2029 430.0 4.2e-120
XP_005259584 (OMIM: 136836,613852) PREDICTED: alph ( 357) 1971 418.0 1.7e-116
NP_004470 (OMIM: 602030) alpha-(1,3)-fucosyltransf ( 342) 950 206.1 9.6e-53
XP_011533685 (OMIM: 606865) PREDICTED: alpha-(1,3) ( 359) 872 190.0 7.4e-48
XP_016865677 (OMIM: 606865) PREDICTED: alpha-(1,3) ( 359) 872 190.0 7.4e-48
XP_016865679 (OMIM: 606865) PREDICTED: alpha-(1,3) ( 359) 872 190.0 7.4e-48
XP_011533687 (OMIM: 606865) PREDICTED: alpha-(1,3) ( 359) 872 190.0 7.4e-48
NP_006572 (OMIM: 606865) alpha-(1,3)-fucosyltransf ( 359) 872 190.0 7.4e-48
NP_002024 (OMIM: 104230) alpha-(1,3)-fucosyltransf ( 530) 845 184.6 4.7e-46
XP_006717719 (OMIM: 616932) PREDICTED: alpha-(1,3) ( 476) 235 58.0 5.4e-08
NP_001271123 (OMIM: 616932) alpha-(1,3)-fucosyltra ( 476) 235 58.0 5.4e-08
NP_775811 (OMIM: 616932) alpha-(1,3)-fucosyltransf ( 492) 235 58.0 5.5e-08
NP_116053 (OMIM: 616931) alpha-(1,3)-fucosyltransf ( 479) 217 54.2 7.2e-07
XP_011542983 (OMIM: 616931) PREDICTED: alpha-(1,3) ( 504) 217 54.3 7.4e-07
XP_011542982 (OMIM: 616931) PREDICTED: alpha-(1,3) ( 521) 217 54.3 7.6e-07
XP_011542981 (OMIM: 616931) PREDICTED: alpha-(1,3) ( 523) 217 54.3 7.6e-07
XP_011542980 (OMIM: 616931) PREDICTED: alpha-(1,3) ( 534) 217 54.3 7.7e-07
XP_011542979 (OMIM: 616931) PREDICTED: alpha-(1,3) ( 562) 217 54.3 8e-07
XP_011542978 (OMIM: 616931) PREDICTED: alpha-(1,3) ( 604) 217 54.3 8.4e-07
>>NP_002025 (OMIM: 136835) alpha-(1,3)-fucosyltransferas (374 aa)
initn: 2671 init1: 2671 opt: 2671 Z-score: 2996.8 bits: 563.2 E(85289): 3.5e-160
Smith-Waterman score: 2671; 99.7% identity (100.0% similar) in 374 aa overlap (1-374:1-374)
10 20 30 40 50 60
pF1KB9 MDPLGPAKPQWLWRRCLAGLLFQLLVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MDPLGPAKPQWLWRRCLAGLLFQLLVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GSRCQDSMATPAHPTLLILLWTWPFNTPVALPRCSEMVPGAADCNITADSSVYPQADAVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GSRCQDSMATPAHPTLLILLWTWPFNTPVALPRCSEMVPGAADCNITADSSVYPQADAVI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VHHWDIMYNPSANLPPPTRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 VHHWDIMYNPSANLPPPTRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQQE
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
NP_002 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFHWRETLRPRSFSWALAFCKACWKLQQE
310 320 330 340 350 360
370
pF1KB9 SRYQTVRSIAAWFT
::::::::::::::
NP_002 SRYQTVRSIAAWFT
370
>>NP_001091109 (OMIM: 111100) galactoside 3(4)-L-fucosyl (361 aa)
initn: 2322 init1: 2031 opt: 2058 Z-score: 2309.7 bits: 436.0 E(85289): 6.5e-122
Smith-Waterman score: 2331; 88.5% identity (92.5% similar) in 374 aa overlap (1-374:1-361)
10 20 30 40 50 60
pF1KB9 MDPLGPAKPQWLWRRCLAGLLFQLLVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPN
::::: ::::: ::::::.::::::::::::::::::::::::::: ::.
NP_001 MDPLGAAKPQWPWRRCLAALLFQLLVAVCFFSYLRVSRDDATGSPR-----------APS
10 20 30 40
70 80 90 100 110 120
pF1KB9 GSRCQDSMATPAHPTLLILLWTWPFNTPVALPRCSEMVPGAADCNITADSSVYPQADAVI
:: ::. ::..::::::::::::. :::: ::::::::.:::.:::: .::::::.::
NP_001 GSSRQDT--TPTRPTLLILLWTWPFHIPVALSRCSEMVPGTADCHITADRKVYPQADTVI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 VHHWDIMYNPSANLPPPTRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFT
::::::: ::.. ::: ::::::::::..: : ::.:::::: ::::::::::::::::
NP_001 VHHWDIMSNPKSRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQQE
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
NP_001 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALDFCKACWKLQQE
290 300 310 320 330 340
370
pF1KB9 SRYQTVRSIAAWFT
::::::::::::::
NP_001 SRYQTVRSIAAWFT
350 360
>>NP_001091108 (OMIM: 111100) galactoside 3(4)-L-fucosyl (361 aa)
initn: 2322 init1: 2031 opt: 2058 Z-score: 2309.7 bits: 436.0 E(85289): 6.5e-122
Smith-Waterman score: 2331; 88.5% identity (92.5% similar) in 374 aa overlap (1-374:1-361)
10 20 30 40 50 60
pF1KB9 MDPLGPAKPQWLWRRCLAGLLFQLLVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPN
::::: ::::: ::::::.::::::::::::::::::::::::::: ::.
NP_001 MDPLGAAKPQWPWRRCLAALLFQLLVAVCFFSYLRVSRDDATGSPR-----------APS
10 20 30 40
70 80 90 100 110 120
pF1KB9 GSRCQDSMATPAHPTLLILLWTWPFNTPVALPRCSEMVPGAADCNITADSSVYPQADAVI
:: ::. ::..::::::::::::. :::: ::::::::.:::.:::: .::::::.::
NP_001 GSSRQDT--TPTRPTLLILLWTWPFHIPVALSRCSEMVPGTADCHITADRKVYPQADTVI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 VHHWDIMYNPSANLPPPTRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFT
::::::: ::.. ::: ::::::::::..: : ::.:::::: ::::::::::::::::
NP_001 VHHWDIMSNPKSRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQQE
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
NP_001 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALDFCKACWKLQQE
290 300 310 320 330 340
370
pF1KB9 SRYQTVRSIAAWFT
::::::::::::::
NP_001 SRYQTVRSIAAWFT
350 360
>>NP_001091110 (OMIM: 111100) galactoside 3(4)-L-fucosyl (361 aa)
initn: 2322 init1: 2031 opt: 2058 Z-score: 2309.7 bits: 436.0 E(85289): 6.5e-122
Smith-Waterman score: 2331; 88.5% identity (92.5% similar) in 374 aa overlap (1-374:1-361)
10 20 30 40 50 60
pF1KB9 MDPLGPAKPQWLWRRCLAGLLFQLLVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPN
::::: ::::: ::::::.::::::::::::::::::::::::::: ::.
NP_001 MDPLGAAKPQWPWRRCLAALLFQLLVAVCFFSYLRVSRDDATGSPR-----------APS
10 20 30 40
70 80 90 100 110 120
pF1KB9 GSRCQDSMATPAHPTLLILLWTWPFNTPVALPRCSEMVPGAADCNITADSSVYPQADAVI
:: ::. ::..::::::::::::. :::: ::::::::.:::.:::: .::::::.::
NP_001 GSSRQDT--TPTRPTLLILLWTWPFHIPVALSRCSEMVPGTADCHITADRKVYPQADTVI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 VHHWDIMYNPSANLPPPTRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFT
::::::: ::.. ::: ::::::::::..: : ::.:::::: ::::::::::::::::
NP_001 VHHWDIMSNPKSRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQQE
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
NP_001 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALDFCKACWKLQQE
290 300 310 320 330 340
370
pF1KB9 SRYQTVRSIAAWFT
::::::::::::::
NP_001 SRYQTVRSIAAWFT
350 360
>>NP_000140 (OMIM: 111100) galactoside 3(4)-L-fucosyltra (361 aa)
initn: 2322 init1: 2031 opt: 2058 Z-score: 2309.7 bits: 436.0 E(85289): 6.5e-122
Smith-Waterman score: 2331; 88.5% identity (92.5% similar) in 374 aa overlap (1-374:1-361)
10 20 30 40 50 60
pF1KB9 MDPLGPAKPQWLWRRCLAGLLFQLLVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPN
::::: ::::: ::::::.::::::::::::::::::::::::::: ::.
NP_000 MDPLGAAKPQWPWRRCLAALLFQLLVAVCFFSYLRVSRDDATGSPR-----------APS
10 20 30 40
70 80 90 100 110 120
pF1KB9 GSRCQDSMATPAHPTLLILLWTWPFNTPVALPRCSEMVPGAADCNITADSSVYPQADAVI
:: ::. ::..::::::::::::. :::: ::::::::.:::.:::: .::::::.::
NP_000 GSSRQDT--TPTRPTLLILLWTWPFHIPVALSRCSEMVPGTADCHITADRKVYPQADTVI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 VHHWDIMYNPSANLPPPTRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFT
::::::: ::.. ::: ::::::::::..: : ::.:::::: ::::::::::::::::
NP_000 VHHWDIMSNPKSRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQQE
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
NP_000 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALDFCKACWKLQQE
290 300 310 320 330 340
370
pF1KB9 SRYQTVRSIAAWFT
::::::::::::::
NP_000 SRYQTVRSIAAWFT
350 360
>>XP_011526169 (OMIM: 111100) PREDICTED: galactoside 3(4 (361 aa)
initn: 2303 init1: 2012 opt: 2039 Z-score: 2288.4 bits: 432.1 E(85289): 1e-120
Smith-Waterman score: 2312; 88.2% identity (92.0% similar) in 374 aa overlap (1-374:1-361)
10 20 30 40 50 60
pF1KB9 MDPLGPAKPQWLWRRCLAGLLFQLLVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPN
::::: ::::: ::::::.::::::::::::::::::::::::::: ::.
XP_011 MDPLGAAKPQWPWRRCLAALLFQLLVAVCFFSYLRVSRDDATGSPR-----------APS
10 20 30 40
70 80 90 100 110 120
pF1KB9 GSRCQDSMATPAHPTLLILLWTWPFNTPVALPRCSEMVPGAADCNITADSSVYPQADAVI
:: ::. ::..::::::: ::::. :::: ::::::::.:::.:::: .:::::: ::
XP_011 GSSRQDT--TPTRPTLLILLRTWPFHIPVALSRCSEMVPGTADCHITADRKVYPQADMVI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 VHHWDIMYNPSANLPPPTRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFT
::::::: ::.. ::: ::::::::::..: : ::.:::::: ::::::::::::::::
XP_011 VHHWDIMSNPKSRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQQE
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
XP_011 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALDFCKACWKLQQE
290 300 310 320 330 340
370
pF1KB9 SRYQTVRSIAAWFT
::::::::::::::
XP_011 SRYQTVRSIAAWFT
350 360
>>XP_011526167 (OMIM: 111100) PREDICTED: galactoside 3(4 (361 aa)
initn: 2303 init1: 2012 opt: 2039 Z-score: 2288.4 bits: 432.1 E(85289): 1e-120
Smith-Waterman score: 2312; 88.2% identity (92.0% similar) in 374 aa overlap (1-374:1-361)
10 20 30 40 50 60
pF1KB9 MDPLGPAKPQWLWRRCLAGLLFQLLVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPN
::::: ::::: ::::::.::::::::::::::::::::::::::: ::.
XP_011 MDPLGAAKPQWPWRRCLAALLFQLLVAVCFFSYLRVSRDDATGSPR-----------APS
10 20 30 40
70 80 90 100 110 120
pF1KB9 GSRCQDSMATPAHPTLLILLWTWPFNTPVALPRCSEMVPGAADCNITADSSVYPQADAVI
:: ::. ::..::::::: ::::. :::: ::::::::.:::.:::: .:::::: ::
XP_011 GSSRQDT--TPTRPTLLILLRTWPFHIPVALSRCSEMVPGTADCHITADRKVYPQADMVI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 VHHWDIMYNPSANLPPPTRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFT
::::::: ::.. ::: ::::::::::..: : ::.:::::: ::::::::::::::::
XP_011 VHHWDIMSNPKSRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQQE
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
XP_011 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALDFCKACWKLQQE
290 300 310 320 330 340
370
pF1KB9 SRYQTVRSIAAWFT
::::::::::::::
XP_011 SRYQTVRSIAAWFT
350 360
>>XP_011526168 (OMIM: 111100) PREDICTED: galactoside 3(4 (361 aa)
initn: 2303 init1: 2012 opt: 2039 Z-score: 2288.4 bits: 432.1 E(85289): 1e-120
Smith-Waterman score: 2312; 88.2% identity (92.0% similar) in 374 aa overlap (1-374:1-361)
10 20 30 40 50 60
pF1KB9 MDPLGPAKPQWLWRRCLAGLLFQLLVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPN
::::: ::::: ::::::.::::::::::::::::::::::::::: ::.
XP_011 MDPLGAAKPQWPWRRCLAALLFQLLVAVCFFSYLRVSRDDATGSPR-----------APS
10 20 30 40
70 80 90 100 110 120
pF1KB9 GSRCQDSMATPAHPTLLILLWTWPFNTPVALPRCSEMVPGAADCNITADSSVYPQADAVI
:: ::. ::..::::::: ::::. :::: ::::::::.:::.:::: .:::::: ::
XP_011 GSSRQDT--TPTRPTLLILLRTWPFHIPVALSRCSEMVPGTADCHITADRKVYPQADMVI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 VHHWDIMYNPSANLPPPTRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFT
::::::: ::.. ::: ::::::::::..: : ::.:::::: ::::::::::::::::
XP_011 VHHWDIMSNPKSRLPPSPRPQGQRWIWFNLEPPPNCQHLEALDRYFNLTMSYRSDSDIFT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQQE
:::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
XP_011 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALDFCKACWKLQQE
290 300 310 320 330 340
370
pF1KB9 SRYQTVRSIAAWFT
::::::::::::::
XP_011 SRYQTVRSIAAWFT
350 360
>>XP_011526172 (OMIM: 136836,613852) PREDICTED: alpha-(1 (359 aa)
initn: 1991 init1: 1991 opt: 2029 Z-score: 2277.3 bits: 430.0 E(85289): 4.2e-120
Smith-Waterman score: 2239; 85.8% identity (90.6% similar) in 374 aa overlap (1-374:1-359)
10 20 30 40 50 60
pF1KB9 MDPLGPAKPQWLWRRCLAGLLFQLLVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPN
::::::::::: :: ::. ::::::.:::::::::::.:: : : ::
XP_011 MDPLGPAKPQWSWRCCLTTLLFQLLMAVCFFSYLRVSQDD------P--------TVYPN
10 20 30 40
70 80 90 100 110 120
pF1KB9 GSRCQDSMATPAHPTLLILLWTWPFNTPVALPRCSEMVPGAADCNITADSSVYPQADAVI
::: :: .:::: :::::::::: :.:::::::::::.:::::::: .:::::::::
XP_011 GSRFPDSTGTPAHSIPLILLWTWPFNKPIALPRCSEMVPGTADCNITADRKVYPQADAVI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 VHHWDIMYNPSANLPPPTRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFT
::: ..::::::.:: : ::::::::::::::.: .:.:.::::::::::::::::::
XP_011 VHHREVMYNPSAQLPRSPRRQGQRWIWFSMESPSHCWQLKAMDGYFNLTMSYRSDSDIFT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
::::::::::::::::::::::::::::::::: :.::::::::::::::::::::::::
XP_011 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWGPNSARVRYYQSLQAHLKVDVYGRSHK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLPQGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
XP_011 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQEE
290 300 310 320 330 340
370
pF1KB9 SRYQTVRSIAAWFT
::::: :.::::::
XP_011 SRYQT-RGIAAWFT
350
>>XP_011526181 (OMIM: 136836,613852) PREDICTED: alpha-(1 (359 aa)
initn: 1991 init1: 1991 opt: 2029 Z-score: 2277.3 bits: 430.0 E(85289): 4.2e-120
Smith-Waterman score: 2239; 85.8% identity (90.6% similar) in 374 aa overlap (1-374:1-359)
10 20 30 40 50 60
pF1KB9 MDPLGPAKPQWLWRRCLAGLLFQLLVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPN
::::::::::: :: ::. ::::::.:::::::::::.:: : : ::
XP_011 MDPLGPAKPQWSWRCCLTTLLFQLLMAVCFFSYLRVSQDD------P--------TVYPN
10 20 30 40
70 80 90 100 110 120
pF1KB9 GSRCQDSMATPAHPTLLILLWTWPFNTPVALPRCSEMVPGAADCNITADSSVYPQADAVI
::: :: .:::: :::::::::: :.:::::::::::.:::::::: .:::::::::
XP_011 GSRFPDSTGTPAHSIPLILLWTWPFNKPIALPRCSEMVPGTADCNITADRKVYPQADAVI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 VHHWDIMYNPSANLPPPTRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFT
::: ..::::::.:: : ::::::::::::::.: .:.:.::::::::::::::::::
XP_011 VHHREVMYNPSAQLPRSPRRQGQRWIWFSMESPSHCWQLKAMDGYFNLTMSYRSDSDIFT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYGRSHK
::::::::::::::::::::::::::::::::: :.::::::::::::::::::::::::
XP_011 PYGWLEPWSGQPAHPPLNLSAKTELVAWAVSNWGPNSARVRYYQSLQAHLKVDVYGRSHK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 PLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLPQGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPP
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
XP_011 DAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKACWKLQEE
290 300 310 320 330 340
370
pF1KB9 SRYQTVRSIAAWFT
::::: :.::::::
XP_011 SRYQT-RGIAAWFT
350
374 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 04:49:34 2016 done: Mon Nov 7 04:49:35 2016
Total Scan time: 7.960 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]