Result of FASTA (omim) for
pF1KB9815
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9815, 299 aa
1>>>pF1KB9815 299 - 299 aa - 299 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.6692+/-0.000292; mu= 7.6257+/- 0.018
mean_var=182.9278+/-36.471, 0's: 0 Z-trim(123.9): 7 B-trim: 36 in 1/61
Lambda= 0.094828
statistics sampled from 44657 (44664) to 44657 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.825), E-opt: 0.2 (0.524), width: 16
Scan time: 8.670
The best scores are: opt bits E(85289)
NP_006233 (OMIM: 603326) protein phosphatase 1 reg ( 299) 2110 299.9 4.1e-81
NP_001188258 (OMIM: 610541) protein phosphatase 1 ( 285) 346 58.5 1.8e-08
XP_016869324 (OMIM: 610541) PREDICTED: protein pho ( 285) 346 58.5 1.8e-08
XP_006716316 (OMIM: 610541) PREDICTED: protein pho ( 285) 346 58.5 1.8e-08
NP_078883 (OMIM: 610541) protein phosphatase 1 reg ( 285) 346 58.5 1.8e-08
NP_005389 (OMIM: 602999) protein phosphatase 1 reg ( 317) 340 57.7 3.4e-08
NP_002702 (OMIM: 125853,600917,604367) protein pho (1122) 259 47.1 0.00018
>>NP_006233 (OMIM: 603326) protein phosphatase 1 regulat (299 aa)
initn: 2110 init1: 2110 opt: 2110 Z-score: 1577.1 bits: 299.9 E(85289): 4.1e-81
Smith-Waterman score: 2110; 100.0% identity (100.0% similar) in 299 aa overlap (1-299:1-299)
10 20 30 40 50 60
pF1KB9 MSRGPSSAVLPSALGSRKLGPRSLSCLSDLDGGVALEPRACRPPGSPGRAPPPTPAPSGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MSRGPSSAVLPSALGSRKLGPRSLSCLSDLDGGVALEPRACRPPGSPGRAPPPTPAPSGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 DPRLRPIILRRARSLPSSPERRQKAAGAPGAACRPGCSQKLRVRFADALGLELAQVKVFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DPRLRPIILRRARSLPSSPERRQKAAGAPGAACRPGCSQKLRVRFADALGLELAQVKVFN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 AGDDPSVPLHVLSRLAINSDLCCSSQDLEFTLHCLVPDFPPPVEAADFGERLQRQLVCLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AGDDPSVPLHVLSRLAINSDLCCSSQDLEFTLHCLVPDFPPPVEAADFGERLQRQLVCLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 RVTCSDLGISGTVRVCNVAFEKQVAVRYTFSGWRSTHEAVARWRGPAGPEGTEDVFTFGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RVTCSDLGISGTVRVCNVAFEKQVAVRYTFSGWRSTHEAVARWRGPAGPEGTEDVFTFGF
190 200 210 220 230 240
250 260 270 280 290
pF1KB9 PVPPFLLELGSRVHFAVRYQVAGAEYWDNNDHRDYSLTCRNHALHMPRGECEESWIHFI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PVPPFLLELGSRVHFAVRYQVAGAEYWDNNDHRDYSLTCRNHALHMPRGECEESWIHFI
250 260 270 280 290
>>NP_001188258 (OMIM: 610541) protein phosphatase 1 regu (285 aa)
initn: 314 init1: 167 opt: 346 Z-score: 273.2 bits: 58.5 E(85289): 1.8e-08
Smith-Waterman score: 346; 34.1% identity (60.7% similar) in 211 aa overlap (76-277:30-232)
50 60 70 80 90
pF1KB9 SPGRAPPPTPAPSGCDPRLRPIILRRARSLPSSPER-------RQKAAGAPGAACRPGCS
::.: : ...:.: . : .
NP_001 MMAVDIEYRYNCMAPSLRQERFAFKISPKPSKPLRPCIQLSSKNEASGMVAPAVQEKKV
10 20 30 40 50
100 110 120 130 140 150
pF1KB9 QKLRVRFADALGLELAQVKVFNAGDDP-SVPLHVLSRLAINSDLCCSSQDLEFTLHCLVP
.: :: ::: :: :..::::. ::: ..:... ..: : .... :.:
NP_001 KK-RVSFADNQGLALTMVKVFSEFDDPLDMPFNI-TELLDNIVSLTTAESESFVL-----
60 70 80 90 100 110
160 170 180 190 200 210
pF1KB9 DFPPP-VEAADFGERLQRQLVCLERVTCSDLGISGTVRVCNVAFEKQVAVRYTFSGWRST
:: : .. :: .::: . :::: . .: .:.:::.: :.:::: : .:.::. :.:
NP_001 DFSQPSADYLDFRNRLQADHVCLENCVLKDKAIAGTVKVQNLAFEKTVKIRMTFDTWKSY
120 130 140 150 160 170
220 230 240 250 260 270
pF1KB9 HEAVARWRGPAGPEGTEDVFTFGFPVPPFLLELGSRVHFAVRYQVAGAEYWDNNDHRDYS
. .. . . .:.:.: . .: .. :..::: :. : :::.: ..:
NP_001 TDFPCQYVKDTYAGSDRDTFSFDISLPE-KIQSYERMEFAVYYECNGQTYWDSNRGKNYR
180 190 200 210 220 230
280 290
pF1KB9 LTCRNHALHMPRGECEESWIHFI
.
NP_001 IIRAELKSTQGMTKPHSGPDLGISFDQFGSPRCSYGLFPEWPSYLGYEKLGPYY
240 250 260 270 280
>>XP_016869324 (OMIM: 610541) PREDICTED: protein phospha (285 aa)
initn: 314 init1: 167 opt: 346 Z-score: 273.2 bits: 58.5 E(85289): 1.8e-08
Smith-Waterman score: 346; 34.1% identity (60.7% similar) in 211 aa overlap (76-277:30-232)
50 60 70 80 90
pF1KB9 SPGRAPPPTPAPSGCDPRLRPIILRRARSLPSSPER-------RQKAAGAPGAACRPGCS
::.: : ...:.: . : .
XP_016 MMAVDIEYRYNCMAPSLRQERFAFKISPKPSKPLRPCIQLSSKNEASGMVAPAVQEKKV
10 20 30 40 50
100 110 120 130 140 150
pF1KB9 QKLRVRFADALGLELAQVKVFNAGDDP-SVPLHVLSRLAINSDLCCSSQDLEFTLHCLVP
.: :: ::: :: :..::::. ::: ..:... ..: : .... :.:
XP_016 KK-RVSFADNQGLALTMVKVFSEFDDPLDMPFNI-TELLDNIVSLTTAESESFVL-----
60 70 80 90 100 110
160 170 180 190 200 210
pF1KB9 DFPPP-VEAADFGERLQRQLVCLERVTCSDLGISGTVRVCNVAFEKQVAVRYTFSGWRST
:: : .. :: .::: . :::: . .: .:.:::.: :.:::: : .:.::. :.:
XP_016 DFSQPSADYLDFRNRLQADHVCLENCVLKDKAIAGTVKVQNLAFEKTVKIRMTFDTWKSY
120 130 140 150 160 170
220 230 240 250 260 270
pF1KB9 HEAVARWRGPAGPEGTEDVFTFGFPVPPFLLELGSRVHFAVRYQVAGAEYWDNNDHRDYS
. .. . . .:.:.: . .: .. :..::: :. : :::.: ..:
XP_016 TDFPCQYVKDTYAGSDRDTFSFDISLPE-KIQSYERMEFAVYYECNGQTYWDSNRGKNYR
180 190 200 210 220 230
280 290
pF1KB9 LTCRNHALHMPRGECEESWIHFI
.
XP_016 IIRAELKSTQGMTKPHSGPDLGISFDQFGSPRCSYGLFPEWPSYLGYEKLGPYY
240 250 260 270 280
>>XP_006716316 (OMIM: 610541) PREDICTED: protein phospha (285 aa)
initn: 314 init1: 167 opt: 346 Z-score: 273.2 bits: 58.5 E(85289): 1.8e-08
Smith-Waterman score: 346; 34.1% identity (60.7% similar) in 211 aa overlap (76-277:30-232)
50 60 70 80 90
pF1KB9 SPGRAPPPTPAPSGCDPRLRPIILRRARSLPSSPER-------RQKAAGAPGAACRPGCS
::.: : ...:.: . : .
XP_006 MMAVDIEYRYNCMAPSLRQERFAFKISPKPSKPLRPCIQLSSKNEASGMVAPAVQEKKV
10 20 30 40 50
100 110 120 130 140 150
pF1KB9 QKLRVRFADALGLELAQVKVFNAGDDP-SVPLHVLSRLAINSDLCCSSQDLEFTLHCLVP
.: :: ::: :: :..::::. ::: ..:... ..: : .... :.:
XP_006 KK-RVSFADNQGLALTMVKVFSEFDDPLDMPFNI-TELLDNIVSLTTAESESFVL-----
60 70 80 90 100 110
160 170 180 190 200 210
pF1KB9 DFPPP-VEAADFGERLQRQLVCLERVTCSDLGISGTVRVCNVAFEKQVAVRYTFSGWRST
:: : .. :: .::: . :::: . .: .:.:::.: :.:::: : .:.::. :.:
XP_006 DFSQPSADYLDFRNRLQADHVCLENCVLKDKAIAGTVKVQNLAFEKTVKIRMTFDTWKSY
120 130 140 150 160 170
220 230 240 250 260 270
pF1KB9 HEAVARWRGPAGPEGTEDVFTFGFPVPPFLLELGSRVHFAVRYQVAGAEYWDNNDHRDYS
. .. . . .:.:.: . .: .. :..::: :. : :::.: ..:
XP_006 TDFPCQYVKDTYAGSDRDTFSFDISLPE-KIQSYERMEFAVYYECNGQTYWDSNRGKNYR
180 190 200 210 220 230
280 290
pF1KB9 LTCRNHALHMPRGECEESWIHFI
.
XP_006 IIRAELKSTQGMTKPHSGPDLGISFDQFGSPRCSYGLFPEWPSYLGYEKLGPYY
240 250 260 270 280
>>NP_078883 (OMIM: 610541) protein phosphatase 1 regulat (285 aa)
initn: 314 init1: 167 opt: 346 Z-score: 273.2 bits: 58.5 E(85289): 1.8e-08
Smith-Waterman score: 346; 34.1% identity (60.7% similar) in 211 aa overlap (76-277:30-232)
50 60 70 80 90
pF1KB9 SPGRAPPPTPAPSGCDPRLRPIILRRARSLPSSPER-------RQKAAGAPGAACRPGCS
::.: : ...:.: . : .
NP_078 MMAVDIEYRYNCMAPSLRQERFAFKISPKPSKPLRPCIQLSSKNEASGMVAPAVQEKKV
10 20 30 40 50
100 110 120 130 140 150
pF1KB9 QKLRVRFADALGLELAQVKVFNAGDDP-SVPLHVLSRLAINSDLCCSSQDLEFTLHCLVP
.: :: ::: :: :..::::. ::: ..:... ..: : .... :.:
NP_078 KK-RVSFADNQGLALTMVKVFSEFDDPLDMPFNI-TELLDNIVSLTTAESESFVL-----
60 70 80 90 100 110
160 170 180 190 200 210
pF1KB9 DFPPP-VEAADFGERLQRQLVCLERVTCSDLGISGTVRVCNVAFEKQVAVRYTFSGWRST
:: : .. :: .::: . :::: . .: .:.:::.: :.:::: : .:.::. :.:
NP_078 DFSQPSADYLDFRNRLQADHVCLENCVLKDKAIAGTVKVQNLAFEKTVKIRMTFDTWKSY
120 130 140 150 160 170
220 230 240 250 260 270
pF1KB9 HEAVARWRGPAGPEGTEDVFTFGFPVPPFLLELGSRVHFAVRYQVAGAEYWDNNDHRDYS
. .. . . .:.:.: . .: .. :..::: :. : :::.: ..:
NP_078 TDFPCQYVKDTYAGSDRDTFSFDISLPE-KIQSYERMEFAVYYECNGQTYWDSNRGKNYR
180 190 200 210 220 230
280 290
pF1KB9 LTCRNHALHMPRGECEESWIHFI
.
NP_078 IIRAELKSTQGMTKPHSGPDLGISFDQFGSPRCSYGLFPEWPSYLGYEKLGPYY
240 250 260 270 280
>>NP_005389 (OMIM: 602999) protein phosphatase 1 regulat (317 aa)
initn: 270 init1: 155 opt: 340 Z-score: 268.1 bits: 57.7 E(85289): 3.4e-08
Smith-Waterman score: 344; 29.8% identity (58.5% similar) in 275 aa overlap (19-289:10-265)
10 20 30 40 50 60
pF1KB9 MSRGPSSAVLPSALGSRKLGPRSLSCLSDLDGGVALEPRACRPPGSPGRAPPPTPAPSGC
: :: :. : . ::. : : ...:: .
NP_005 MSCTRMIQVLDPRPLTS-SVMPVDVAM--RLCL-----AHSPPVKSFLGPY
10 20 30 40
70 80 90 100 110
pF1KB9 DPRLRPIILRRARSLPSSPERRQKAAGAPGAACRPGCSQKLRVRFADALGLELAQVKVF-
: : .. . . : : . ..:: . : . ..: :: :::. :: :. ..::
NP_005 DEFQRRHFVNKLKPLKSCLNIKHKAKSQNDWKCSHNQAKK-RVVFADSKGLSLTAIHVFS
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB9 NAGDDPSVPLHVLSRLAINSDLCCSSQDLEFTLHCLVPDFPPP-VEAADFGERLQRQLVC
. ..:. :. .. : .: :. :: . . :. ::: : .. .: ..:...::
NP_005 DLPEEPAWDLQ-FDLLDLN-DI--SSALKHHEEKNLILDFPQPSTDYLSFRSHFQKNFVC
110 120 130 140 150
180 190 200 210 220 230
pF1KB9 LERVTCSDLGISGTVRVCNVAFEKQVAVRYTFSGWRS-THEAVARWRGPAGPEGTE-DVF
:: . .. ..:::.: ::.:::.: .: ::..:.. : . .. : ::. :.:
NP_005 LENCSLQERTVTGTVKVKNVSFEKKVQIRITFDSWKNYTDVDCVYMKNVYG--GTDSDTF
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB9 TFGFPVPPFLLELGSRVHFAVRYQVAGAEYWDNNDHRDYSLTCRNHALHMPRGECEESWI
.:.. .:: .. ....: . :.. : .::::: ..: .. :. : :
NP_005 SFAIDLPP-VIPTEQKIEFCISYHANGQVFWDNNDGQNYRIV---HVQWKPDGVQTQMAP
220 230 240 250 260 270
pF1KB9 HFI
NP_005 QDCAFHQTSPKTELESTIFGSPRLASGLFPEWQSWGRMENLASYR
280 290 300 310
>>NP_002702 (OMIM: 125853,600917,604367) protein phospha (1122 aa)
initn: 252 init1: 103 opt: 259 Z-score: 201.1 bits: 47.1 E(85289): 0.00018
Smith-Waterman score: 309; 31.1% identity (61.7% similar) in 206 aa overlap (79-280:41-232)
50 60 70 80 90 100
pF1KB9 RAPPPTPAPSGCDPRLRPIILRRARSLPSSPERRQKAAGAPGAACRPGCSQKLRVRFADA
: :: . .. :. . . :: :::.
NP_002 SKDNFLEVPNLSDSLCEDEEVTFQPGFSPQPSRRGSDSSEDIYLDTPSSGTR-RVSFADS
20 30 40 50 60
110 120 130 140 150 160
pF1KB9 LGLELAQVKVFNAGDDPSVPLHVLSRLAINSDLCCSSQDLEFTLHCLVPDFPPPVEAADF
.:..:..:: :. . ::. . . ...:. . . . :.: : : :.
NP_002 FGFNLVSVKEFDCWELPSAS----TTFDLGTDIFHTEE------YVLAPLFDLPSSKEDL
70 80 90 100 110
170 180 190 200 210 220
pF1KB9 GERLQRQLVCLERVTCSDLG---ISGTVRVCNVAFEKQVAVRYTFSGWRSTHEAVARWRG
..:: : . :: : : :: :.: .:: ::.::: : ::.... :.. .. .:..
NP_002 MQQLQIQKAILES-TESLLGSTSIKGIIRVLNVSFEKLVYVRMSLDDWQTHYDILAEYV-
120 130 140 150 160 170
230 240 250 260 270 280
pF1KB9 PAGPEGTEDVFTFGFP-VPPFLLELGSRVHFAVRYQVAGAEYWDNNDHRDYSLTCRNHAL
: . .: : :.: . :::. . ::.:.: .::... . .:.::. .:.. :.
NP_002 PNSCDGETDQFSFKIVLVPPYQKD-GSKVEFCIRYETSVGTFWSNNNGTNYTFICQKKEQ
180 190 200 210 220 230
290
pF1KB9 HMPRGECEESWIHFI
NP_002 EPEPVKPWKEVPNRQIKGCLKVKSSKEESSVTSEENNFENPKNTDTYIPTIICSHEDKED
240 250 260 270 280 290
299 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 19:12:08 2016 done: Fri Nov 4 19:12:09 2016
Total Scan time: 8.670 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]