Result of FASTA (ccds) for
pF1KB9803
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9803, 200 aa
1>>>pF1KB9803 200 - 200 aa - 200 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4708+/-0.000887; mu= 1.8422+/- 0.054
mean_var=256.1775+/-49.910, 0's: 0 Z-trim(116.0): 15 B-trim: 0 in 0/52
Lambda= 0.080132
statistics sampled from 16582 (16594) to 16582 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.82), E-opt: 0.2 (0.51), width: 16
Scan time: 2.400
The best scores are: opt bits E(32554)
CCDS14511.1 TCEAL3 gene_id:85012|Hs108|chrX ( 200) 1398 173.3 8.8e-44
CCDS35356.1 TCEAL5 gene_id:340543|Hs108|chrX ( 206) 1254 156.7 9.2e-39
CCDS43978.1 TCEAL6 gene_id:158931|Hs108|chrX ( 183) 1180 148.1 3.2e-36
CCDS14496.1 TCEAL2 gene_id:140597|Hs108|chrX ( 227) 560 76.5 1.4e-14
CCDS14510.2 TCEAL4 gene_id:79921|Hs108|chrX ( 215) 544 74.6 4.8e-14
CCDS76004.1 TCEAL4 gene_id:79921|Hs108|chrX ( 358) 544 74.9 6.8e-14
>>CCDS14511.1 TCEAL3 gene_id:85012|Hs108|chrX (200 aa)
initn: 1398 init1: 1398 opt: 1398 Z-score: 899.5 bits: 173.3 E(32554): 8.8e-44
Smith-Waterman score: 1398; 100.0% identity (100.0% similar) in 200 aa overlap (1-200:1-200)
10 20 30 40 50 60
pF1KB9 MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRG
130 140 150 160 170 180
190 200
pF1KB9 VRGVRGGGRGQRGLHDIPYL
::::::::::::::::::::
CCDS14 VRGVRGGGRGQRGLHDIPYL
190 200
>>CCDS35356.1 TCEAL5 gene_id:340543|Hs108|chrX (206 aa)
initn: 1520 init1: 1241 opt: 1254 Z-score: 809.4 bits: 156.7 E(32554): 9.2e-39
Smith-Waterman score: 1254; 88.3% identity (94.2% similar) in 206 aa overlap (1-200:1-206)
10 20 30 40 50
pF1KB9 MEKPYNKNEG------NLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEP
::: :..::: :::.::::::: .::::::::::::.::::::::::::::::
CCDS35 MEKLYKENEGKPENERNLESEGKPEDEGSTEDEGKSDEEEKPDMEGKTECEGKREDEGEP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 GDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKT
::::::::::.:::::.:::: :::.::::::::::::::::::::::::::::::::::
CCDS35 GDEGQLEDEGNQEKQGKSEGEDKPQSEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKT
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 DRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFA
130 140 150 160 170 180
180 190 200
pF1KB9 PRGQRGVRGVRGGGRGQRGLHDIPYL
:::::::::::::::::. :.:.::.
CCDS35 PRGQRGVRGVRGGGRGQKDLEDVPYV
190 200
>>CCDS43978.1 TCEAL6 gene_id:158931|Hs108|chrX (183 aa)
initn: 1164 init1: 1164 opt: 1180 Z-score: 763.8 bits: 148.1 E(32554): 3.2e-36
Smith-Waterman score: 1180; 93.4% identity (97.3% similar) in 183 aa overlap (1-183:1-182)
10 20 30 40 50 60
pF1KB9 MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQL
:::::::::::::::::::::::::::::::::::::.::::::::::. ::::::::::
CCDS43 MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDAEGKTECEGKRKAEGEPGDEGQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 EDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDD
::.:::::::.::::::::::::::::::::.:::::::::: :::::::::::::::::
CCDS43 EDKGSQEKQGKSEGEGKPQGEGKPASQAKPEGQPRAAEKRPAGDYVPRKAKRKTDRGTDD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRG
:::::::::::::::::::::::::::::::::::::::::::::::::::::: .:. :
CCDS43 SPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFA-QGDNG
130 140 150 160 170
190 200
pF1KB9 VRGVRGGGRGQRGLHDIPYL
: :
CCDS43 VSGE
180
>>CCDS14496.1 TCEAL2 gene_id:140597|Hs108|chrX (227 aa)
initn: 767 init1: 372 opt: 560 Z-score: 375.3 bits: 76.5 E(32554): 1.4e-14
Smith-Waterman score: 561; 41.7% identity (66.1% similar) in 230 aa overlap (1-200:1-227)
10 20 30
pF1KB9 MEKPYNKNEGNLENEGKPEDEVEPDDEGKSD----------------------------E
::: .:.::: :.:: ..: .: ::: . .
CCDS14 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB9 EEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPES
.:::. ::.. ::: : .:. .: . ::. :. ::.::::.:..: .: :...:::
CCDS14 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB9 QPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE
. ::: :::::: .::::::::..: . :. .: ... ..:.:.:.:: ...:....
CCDS14 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK
130 140 150 160 170 180
160 170 180 190 200
pF1KB9 LRK-KQKMGGFHWMQRDVQDPFAPRGQRGVRGVRGGGRG-QRGLHDIPYL
:: :::.:.: ::::..:::: ::: : ::: :. .: .::::.
CCDS14 RRKSKQKLGAFLWMQRNLQDPFYPRGPREF---RGGCRAPRRDTEDIPYV
190 200 210 220
>>CCDS14510.2 TCEAL4 gene_id:79921|Hs108|chrX (215 aa)
initn: 599 init1: 326 opt: 544 Z-score: 365.6 bits: 74.6 E(32554): 4.8e-14
Smith-Waterman score: 605; 48.6% identity (70.6% similar) in 218 aa overlap (1-200:1-215)
10 20 30 40 50
pF1KB9 MEKPYNKNEGNLENEGKPEDEVEPDDEGKSD-----EEEKPDVEGKTECEGKREDE----
::: :..::: :.:: :.: .:.:: : . :..: . ::::: .:: ::
CCDS14 MEKLYSENEGMASNQGKMENEEQPQDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLK
10 20 30 40 50 60
60 70 80 90 100
pF1KB9 --GEP---GD--EGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPESQPRAAEKRPAED
:.: :. ::. : :: .: .: :: ::::. :::: :...: :. ::: ::::::
CCDS14 DKGKPESEGEAKEGKSEREGESEMEGGSEREGKPEIEGKPESEGEPGSETRAAGKRPAED
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 YVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRK-KQKMGGFH
:::::::::..: :. .: ... ..:.:.:.:: .....:.: :: :::.:.:
CCDS14 DVPRKAKRKTNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQDEKRKSKQKLGAFL
130 140 150 160 170 180
170 180 190 200
pF1KB9 WMQRDVQDPFAPRGQRGVRGVRGGGRG-QRGLHDIPYL
::::..:::: ::: : ::: :. .: ..::::.
CCDS14 WMQRNLQDPFYPRGPREF---RGGCRAPRRDIEDIPYV
190 200 210
>>CCDS76004.1 TCEAL4 gene_id:79921|Hs108|chrX (358 aa)
initn: 599 init1: 326 opt: 544 Z-score: 362.9 bits: 74.9 E(32554): 6.8e-14
Smith-Waterman score: 605; 48.6% identity (70.6% similar) in 218 aa overlap (1-200:144-358)
10 20 30
pF1KB9 MEKPYNKNEGNLENEGKPEDEVEPDDEGKS
::: :..::: :.:: :.: .:.:: :
CCDS76 QRSAKPEKEEQPVQNPRRSVKDRKRRGNLDMEKLYSENEGMASNQGKMENEEQPQDERKP
120 130 140 150 160 170
40 50 60 70
pF1KB9 D-----EEEKPDVEGKTECEGKREDE------GEP---GD--EGQLEDEGSQEKQGRSEG
. :..: . ::::: .:: :: :.: :. ::. : :: .: .: ::
CCDS76 EVTCTLEDKKLENEGKTENKGKTGDEEMLKDKGKPESEGEAKEGKSEREGESEMEGGSER
180 190 200 210 220 230
80 90 100 110 120 130
pF1KB9 EGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHL
::::. :::: :...: :. ::: :::::: :::::::::..: :. .: ... ..
CCDS76 EGKPEIEGKPESEGEPGSETRAAGKRPAEDDVPRKAKRKTNKGLAHYLKEYKEAIHDMNF
240 250 260 270 280 290
140 150 160 170 180 190
pF1KB9 SSEEMMRECGDVSRAQEELRK-KQKMGGFHWMQRDVQDPFAPRGQRGVRGVRGGGRG-QR
:.:.:.:: .....:.: :: :::.:.: ::::..:::: ::: : ::: :. .:
CCDS76 SNEDMIREFDNMAKVQDEKRKSKQKLGAFLWMQRNLQDPFYPRGPREF---RGGCRAPRR
300 310 320 330 340 350
200
pF1KB9 GLHDIPYL
..::::.
CCDS76 DIEDIPYV
200 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 19:05:20 2016 done: Fri Nov 4 19:05:21 2016
Total Scan time: 2.400 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]