FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9781, 120 aa
  1>>>pF1KB9781 120 - 120 aa - 120 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8270+/-0.000712; mu= 9.2469+/- 0.043
 mean_var=91.3872+/-18.243, 0's: 0 Z-trim(111.7): 22  B-trim: 0 in 0/52
 Lambda= 0.134163
 statistics sampled from 12589 (12606) to 12589 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.761), E-opt: 0.2 (0.387), width:  16
 Scan time:  1.590

The best scores are:                                      opt bits E(32554)
CCDS8651.1 CREBL2 gene_id:1389|Hs108|chr12         ( 120)  791 161.9 8.4e-41


>>CCDS8651.1 CREBL2 gene_id:1389|Hs108|chr12              (120 aa)
 initn: 791 init1: 791 opt: 791  Z-score: 846.0  bits: 161.9 E(32554): 8.4e-41
Smith-Waterman score: 791; 100.0% identity (100.0% similar) in 120 aa overlap (1-120:1-120)

               10        20        30        40        50        60
pF1KB9 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNSW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNSW
               70        80        90       100       110       120




120 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 18:53:20 2016 done: Fri Nov  4 18:53:20 2016
 Total Scan time:  1.590 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]