Result of FASTA (omim) for
pF1KB9670
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9670, 273 aa
1>>>pF1KB9670 273 - 273 aa - 273 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.2004+/-0.000733; mu= 6.9504+/- 0.044
mean_var=312.2701+/-64.823, 0's: 0 Z-trim(112.8): 1921 B-trim: 80 in 1/48
Lambda= 0.072579
statistics sampled from 19711 (21936) to 19711 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.598), E-opt: 0.2 (0.257), width: 16
Scan time: 6.430
The best scores are: opt bits E(85289)
XP_016862623 (OMIM: 194553) PREDICTED: zinc finger ( 273) 1949 218.1 1.4e-56
XP_016862621 (OMIM: 194553) PREDICTED: zinc finger ( 273) 1949 218.1 1.4e-56
XP_016862622 (OMIM: 194553) PREDICTED: zinc finger ( 273) 1949 218.1 1.4e-56
XP_016862624 (OMIM: 194553) PREDICTED: zinc finger ( 273) 1949 218.1 1.4e-56
XP_016862625 (OMIM: 194553) PREDICTED: zinc finger ( 273) 1949 218.1 1.4e-56
NP_009067 (OMIM: 194553) zinc finger protein 80 [H ( 273) 1949 218.1 1.4e-56
XP_011525824 (OMIM: 604668) PREDICTED: zinc finger ( 595) 1026 122.0 2.6e-27
NP_003408 (OMIM: 604668) zinc finger protein 264 [ ( 627) 1026 122.0 2.7e-27
NP_998763 (OMIM: 616847) zinc finger protein 543 [ ( 600) 984 117.6 5.6e-26
XP_011513163 (OMIM: 602277) PREDICTED: zinc finger ( 675) 943 113.4 1.2e-24
NP_001305822 (OMIM: 602277) zinc finger protein 18 ( 675) 943 113.4 1.2e-24
NP_009080 (OMIM: 602277) zinc finger protein 184 i ( 751) 943 113.5 1.2e-24
NP_001305821 (OMIM: 602277) zinc finger protein 18 ( 751) 943 113.5 1.2e-24
NP_001305820 (OMIM: 602277) zinc finger protein 18 ( 751) 943 113.5 1.2e-24
XP_011525788 (OMIM: 608640) PREDICTED: zinc finger ( 436) 937 112.5 1.4e-24
NP_001265221 (OMIM: 194510) zinc finger protein 3 ( 410) 936 112.3 1.5e-24
XP_006716174 (OMIM: 194510) PREDICTED: zinc finger ( 410) 936 112.3 1.5e-24
XP_016868072 (OMIM: 194510) PREDICTED: zinc finger ( 410) 936 112.3 1.5e-24
NP_001265220 (OMIM: 194510) zinc finger protein 3 ( 410) 936 112.3 1.5e-24
XP_016868071 (OMIM: 194510) PREDICTED: zinc finger ( 410) 936 112.3 1.5e-24
NP_001309757 (OMIM: 608640) zinc finger protein 46 ( 475) 937 112.5 1.5e-24
NP_001309756 (OMIM: 608640) zinc finger protein 46 ( 509) 937 112.6 1.5e-24
NP_001309755 (OMIM: 608640) zinc finger protein 46 ( 509) 937 112.6 1.5e-24
NP_001265216 (OMIM: 194510) zinc finger protein 3 ( 446) 936 112.4 1.6e-24
NP_116313 (OMIM: 194510) zinc finger protein 3 iso ( 446) 936 112.4 1.6e-24
NP_001305064 (OMIM: 194510) zinc finger protein 3 ( 446) 936 112.4 1.6e-24
NP_001265219 (OMIM: 194510) zinc finger protein 3 ( 446) 936 112.4 1.6e-24
NP_001265213 (OMIM: 194510) zinc finger protein 3 ( 446) 936 112.4 1.6e-24
XP_016882959 (OMIM: 608640) PREDICTED: zinc finger ( 519) 937 112.6 1.6e-24
NP_001305065 (OMIM: 194510) zinc finger protein 3 ( 453) 936 112.4 1.6e-24
NP_001309752 (OMIM: 608640) zinc finger protein 46 ( 532) 937 112.6 1.6e-24
NP_001309754 (OMIM: 608640) zinc finger protein 46 ( 532) 937 112.6 1.6e-24
NP_001284552 (OMIM: 608640) zinc finger protein 46 ( 540) 937 112.6 1.6e-24
NP_001309750 (OMIM: 608640) zinc finger protein 46 ( 557) 937 112.6 1.6e-24
NP_694989 (OMIM: 608640) zinc finger protein 461 i ( 563) 937 112.6 1.6e-24
XP_016881831 (OMIM: 614275) PREDICTED: zinc finger ( 434) 925 111.2 3.4e-24
XP_016881832 (OMIM: 614275) PREDICTED: zinc finger ( 434) 925 111.2 3.4e-24
NP_001035939 (OMIM: 614275) zinc finger protein 56 ( 499) 925 111.3 3.7e-24
XP_011524816 (OMIM: 614275) PREDICTED: zinc finger ( 499) 925 111.3 3.7e-24
XP_016881830 (OMIM: 614275) PREDICTED: zinc finger ( 499) 925 111.3 3.7e-24
XP_011524814 (OMIM: 614275) PREDICTED: zinc finger ( 499) 925 111.3 3.7e-24
NP_689690 (OMIM: 614275) zinc finger protein 565 [ ( 499) 925 111.3 3.7e-24
NP_001309066 (OMIM: 600398) zinc finger protein 16 ( 782) 920 111.1 6.6e-24
NP_001309067 (OMIM: 600398) zinc finger protein 16 ( 782) 920 111.1 6.6e-24
NP_001309068 (OMIM: 600398) zinc finger protein 16 ( 782) 920 111.1 6.6e-24
NP_001309065 (OMIM: 600398) zinc finger protein 16 ( 818) 920 111.1 6.8e-24
NP_001309057 (OMIM: 600398) zinc finger protein 16 ( 818) 920 111.1 6.8e-24
XP_016882935 (OMIM: 600398) PREDICTED: zinc finger ( 818) 920 111.1 6.8e-24
NP_001309063 (OMIM: 600398) zinc finger protein 16 ( 818) 920 111.1 6.8e-24
NP_001309058 (OMIM: 600398) zinc finger protein 16 ( 818) 920 111.1 6.8e-24
>>XP_016862623 (OMIM: 194553) PREDICTED: zinc finger pro (273 aa)
initn: 1949 init1: 1949 opt: 1949 Z-score: 1136.7 bits: 218.1 E(85289): 1.4e-56
Smith-Waterman score: 1949; 99.3% identity (99.6% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB9 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 NSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KIHTGEKPCKCSECGKTFTYHSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHT
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
XP_016 KIHTGEKPCKCSECGKTFTYRSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHT
190 200 210 220 230 240
250 260 270
pF1KB9 GEKPYECLEHRKAFGYHSAFAQQSKIHSGGKNL
:::::::::::: ::::::::::::::::::::
XP_016 GEKPYECLEHRKDFGYHSAFAQQSKIHSGGKNL
250 260 270
>>XP_016862621 (OMIM: 194553) PREDICTED: zinc finger pro (273 aa)
initn: 1949 init1: 1949 opt: 1949 Z-score: 1136.7 bits: 218.1 E(85289): 1.4e-56
Smith-Waterman score: 1949; 99.3% identity (99.6% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB9 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 NSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KIHTGEKPCKCSECGKTFTYHSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHT
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
XP_016 KIHTGEKPCKCSECGKTFTYRSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHT
190 200 210 220 230 240
250 260 270
pF1KB9 GEKPYECLEHRKAFGYHSAFAQQSKIHSGGKNL
:::::::::::: ::::::::::::::::::::
XP_016 GEKPYECLEHRKDFGYHSAFAQQSKIHSGGKNL
250 260 270
>>XP_016862622 (OMIM: 194553) PREDICTED: zinc finger pro (273 aa)
initn: 1949 init1: 1949 opt: 1949 Z-score: 1136.7 bits: 218.1 E(85289): 1.4e-56
Smith-Waterman score: 1949; 99.3% identity (99.6% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB9 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 NSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KIHTGEKPCKCSECGKTFTYHSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHT
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
XP_016 KIHTGEKPCKCSECGKTFTYRSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHT
190 200 210 220 230 240
250 260 270
pF1KB9 GEKPYECLEHRKAFGYHSAFAQQSKIHSGGKNL
:::::::::::: ::::::::::::::::::::
XP_016 GEKPYECLEHRKDFGYHSAFAQQSKIHSGGKNL
250 260 270
>>XP_016862624 (OMIM: 194553) PREDICTED: zinc finger pro (273 aa)
initn: 1949 init1: 1949 opt: 1949 Z-score: 1136.7 bits: 218.1 E(85289): 1.4e-56
Smith-Waterman score: 1949; 99.3% identity (99.6% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB9 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 NSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KIHTGEKPCKCSECGKTFTYHSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHT
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
XP_016 KIHTGEKPCKCSECGKTFTYRSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHT
190 200 210 220 230 240
250 260 270
pF1KB9 GEKPYECLEHRKAFGYHSAFAQQSKIHSGGKNL
:::::::::::: ::::::::::::::::::::
XP_016 GEKPYECLEHRKDFGYHSAFAQQSKIHSGGKNL
250 260 270
>>XP_016862625 (OMIM: 194553) PREDICTED: zinc finger pro (273 aa)
initn: 1949 init1: 1949 opt: 1949 Z-score: 1136.7 bits: 218.1 E(85289): 1.4e-56
Smith-Waterman score: 1949; 99.3% identity (99.6% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB9 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 NSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KIHTGEKPCKCSECGKTFTYHSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHT
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
XP_016 KIHTGEKPCKCSECGKTFTYRSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHT
190 200 210 220 230 240
250 260 270
pF1KB9 GEKPYECLEHRKAFGYHSAFAQQSKIHSGGKNL
:::::::::::: ::::::::::::::::::::
XP_016 GEKPYECLEHRKDFGYHSAFAQQSKIHSGGKNL
250 260 270
>>NP_009067 (OMIM: 194553) zinc finger protein 80 [Homo (273 aa)
initn: 1949 init1: 1949 opt: 1949 Z-score: 1136.7 bits: 218.1 E(85289): 1.4e-56
Smith-Waterman score: 1949; 99.3% identity (99.6% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB9 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 NSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 NSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 LCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KIHTGEKPCKCSECGKTFTYHSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHT
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
NP_009 KIHTGEKPCKCSECGKTFTYRSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHT
190 200 210 220 230 240
250 260 270
pF1KB9 GEKPYECLEHRKAFGYHSAFAQQSKIHSGGKNL
:::::::::::: ::::::::::::::::::::
NP_009 GEKPYECLEHRKDFGYHSAFAQQSKIHSGGKNL
250 260 270
>>XP_011525824 (OMIM: 604668) PREDICTED: zinc finger pro (595 aa)
initn: 6265 init1: 895 opt: 1026 Z-score: 611.2 bits: 122.0 E(85289): 2.6e-27
Smith-Waterman score: 1026; 51.1% identity (79.4% similar) in 272 aa overlap (1-271:122-393)
10 20 30
pF1KB9 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLH
:::. :::::.::. :.. ::::: :: ..
XP_011 GQAEDQDGLSEMQEGHFRPGIDPQEKSPGKMSPECDGLGTADGVCSRIGQEQVSPGDRVR
100 110 120 130 140 150
40 50 60 70 80
pF1KB9 ECDSQGPSKDTLVREGKT-YKCKECGSVFNKNSLLVRHQQIHTGVKPYECQECGKAFPEK
.: .:: ...: .. .::.:::.::::. ::. :..::.::::::: ::::.: ..
XP_011 SHNSCESGKDPMIQEEENNFKCSECGKVFNKKHLLAGHEKIHSGVKPYECTECGKTFIKS
160 170 180 190 200 210
90 100 110 120 130 140
pF1KB9 VDFVRPMRIHTGEKPCKCVECGKVFNRRSHLLCYRQIHTGEKPYECSECGKTFSYHSVFI
. ... :::::.: .:.::::.:::.:.: ...::.:::::.:.::::.:...: :.
XP_011 THLLQHHMIHTGERPYECMECGKAFNRKSYLTQHQRIHSGEKPYKCNECGKAFTHRSNFV
220 230 240 250 260 270
150 160 170 180 190 200
pF1KB9 QHRVTHTGEKLFGCKECGKTFYYNSSLTRHMKIHTGEKPCKCSECGKTFTYHSVFFRHSM
: ::::: : : :::..: . .. ::. .:.::.: .: ::::.: ..: .. :..
XP_011 LHNRRHTGEKSFVCTECGQVFRHRPGFLRHYVVHSGENPYECLECGKVFKHRSYLMWHQQ
280 290 300 310 320 330
210 220 230 240 250 260
pF1KB9 THTAGKPYECKECGKGFYYSYSLTRHTRSHTGEKPYECLEHRKAFGYHSAFAQQSKIHSG
:::. :::::.:::: : : .: .: ::::::.:::: :::...: . ....::.:
XP_011 THTGEKPYECSECGKVFLESAALIHHYVIHTGEKPFECLECGKAFNHRSYLKRHQRIHTG
340 350 360 370 380 390
270
pF1KB9 GKNL
:
XP_011 EKPFVCSECGKAFTHCSTFILHKRAHTGEKPFECKECGKAFSNRKDLIRHFSIHTGEKPY
400 410 420 430 440 450
>--
initn: 619 init1: 619 opt: 620 Z-score: 381.5 bits: 79.5 E(85289): 1.6e-14
Smith-Waterman score: 620; 44.0% identity (72.5% similar) in 200 aa overlap (49-246:395-586)
20 30 40 50 60 70
pF1KB9 LQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNKNSLLVRHQQIHTGVKPYE
. :.:::..:.. : .. :.. ::: ::.:
XP_011 KPFECLECGKAFNHRSYLKRHQRIHTGEKPFVCSECGKAFTHCSTFILHKRAHTGEKPFE
370 380 390 400 410 420
80 90 100 110 120 130
pF1KB9 CQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHLLCYRQIHTGEKPYECSEC
:.:::::: .. :..: . ::::::: .::::::.:.: : : ...::.::::::: ::
XP_011 CKECGKAFSNRKDLIRHFSIHTGEKPYECVECGKAFTRMSGLTRHKRIHSGEKPYECVEC
430 440 450 460 470 480
140 150 160 170 180 190
pF1KB9 GKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHMKIHTGEKPCKCSECGKTF
::.: . . .:.: . ::::: . :.::::.: .::::.:...:::..: . .. :. :
XP_011 GKSFCWSTNLIRHAIIHTGEKPYKCSECGKAFSRSSSLTQHQRMHTGKNPISVTDVGRPF
490 500 510 520 530 540
200 210 220 230 240 250
pF1KB9 T--YHSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHTGEKPYECLEHRKAFGY
: :: .:. . :: . .. : ..: : ....::.
XP_011 TSGQTSVTLRELLL---GKDFLNVTTEANI-----LPEETSSSASDQPYQRETPQVSSL
550 560 570 580 590
260 270
pF1KB9 HSAFAQQSKIHSGGKNL
>>NP_003408 (OMIM: 604668) zinc finger protein 264 [Homo (627 aa)
initn: 6265 init1: 895 opt: 1026 Z-score: 611.0 bits: 122.0 E(85289): 2.7e-27
Smith-Waterman score: 1026; 51.1% identity (79.4% similar) in 272 aa overlap (1-271:154-425)
10 20 30
pF1KB9 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLH
:::. :::::.::. :.. ::::: :: ..
NP_003 GQAEDQDGLSEMQEGHFRPGIDPQEKSPGKMSPECDGLGTADGVCSRIGQEQVSPGDRVR
130 140 150 160 170 180
40 50 60 70 80
pF1KB9 ECDSQGPSKDTLVREGKT-YKCKECGSVFNKNSLLVRHQQIHTGVKPYECQECGKAFPEK
.: .:: ...: .. .::.:::.::::. ::. :..::.::::::: ::::.: ..
NP_003 SHNSCESGKDPMIQEEENNFKCSECGKVFNKKHLLAGHEKIHSGVKPYECTECGKTFIKS
190 200 210 220 230 240
90 100 110 120 130 140
pF1KB9 VDFVRPMRIHTGEKPCKCVECGKVFNRRSHLLCYRQIHTGEKPYECSECGKTFSYHSVFI
. ... :::::.: .:.::::.:::.:.: ...::.:::::.:.::::.:...: :.
NP_003 THLLQHHMIHTGERPYECMECGKAFNRKSYLTQHQRIHSGEKPYKCNECGKAFTHRSNFV
250 260 270 280 290 300
150 160 170 180 190 200
pF1KB9 QHRVTHTGEKLFGCKECGKTFYYNSSLTRHMKIHTGEKPCKCSECGKTFTYHSVFFRHSM
: ::::: : : :::..: . .. ::. .:.::.: .: ::::.: ..: .. :..
NP_003 LHNRRHTGEKSFVCTECGQVFRHRPGFLRHYVVHSGENPYECLECGKVFKHRSYLMWHQQ
310 320 330 340 350 360
210 220 230 240 250 260
pF1KB9 THTAGKPYECKECGKGFYYSYSLTRHTRSHTGEKPYECLEHRKAFGYHSAFAQQSKIHSG
:::. :::::.:::: : : .: .: ::::::.:::: :::...: . ....::.:
NP_003 THTGEKPYECSECGKVFLESAALIHHYVIHTGEKPFECLECGKAFNHRSYLKRHQRIHTG
370 380 390 400 410 420
270
pF1KB9 GKNL
:
NP_003 EKPFVCSECGKAFTHCSTFILHKRAHTGEKPFECKECGKAFSNRKDLIRHFSIHTGEKPY
430 440 450 460 470 480
>--
initn: 619 init1: 619 opt: 620 Z-score: 381.3 bits: 79.5 E(85289): 1.7e-14
Smith-Waterman score: 620; 44.0% identity (72.5% similar) in 200 aa overlap (49-246:427-618)
20 30 40 50 60 70
pF1KB9 LQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNKNSLLVRHQQIHTGVKPYE
. :.:::..:.. : .. :.. ::: ::.:
NP_003 KPFECLECGKAFNHRSYLKRHQRIHTGEKPFVCSECGKAFTHCSTFILHKRAHTGEKPFE
400 410 420 430 440 450
80 90 100 110 120 130
pF1KB9 CQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHLLCYRQIHTGEKPYECSEC
:.:::::: .. :..: . ::::::: .::::::.:.: : : ...::.::::::: ::
NP_003 CKECGKAFSNRKDLIRHFSIHTGEKPYECVECGKAFTRMSGLTRHKRIHSGEKPYECVEC
460 470 480 490 500 510
140 150 160 170 180 190
pF1KB9 GKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHMKIHTGEKPCKCSECGKTF
::.: . . .:.: . ::::: . :.::::.: .::::.:...:::..: . .. :. :
NP_003 GKSFCWSTNLIRHAIIHTGEKPYKCSECGKAFSRSSSLTQHQRMHTGKNPISVTDVGRPF
520 530 540 550 560 570
200 210 220 230 240 250
pF1KB9 T--YHSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHTGEKPYECLEHRKAFGY
: :: .:. . :: . .. : ..: : ....::.
NP_003 TSGQTSVTLRELLL---GKDFLNVTTEANI-----LPEETSSSASDQPYQRETPQVSSL
580 590 600 610 620
260 270
pF1KB9 HSAFAQQSKIHSGGKNL
>>NP_998763 (OMIM: 616847) zinc finger protein 543 [Homo (600 aa)
initn: 6550 init1: 952 opt: 984 Z-score: 587.4 bits: 117.6 E(85289): 5.6e-26
Smith-Waterman score: 989; 54.4% identity (77.4% similar) in 261 aa overlap (18-269:299-559)
10 20 30
pF1KB9 MSPKRDGLGTGDGLHSQVLQEQVSTGDN---LHEC-----DSQGPSK
::... ::.. .:: : : .
NP_998 HLTRHQRIHSGEKPYKCSECGKAFTHRSTFVLHHRSHTGEKPFVCKECGKAFRDRPGFIR
270 280 290 300 310 320
40 50 60 70 80 90
pF1KB9 DTLVREG-KTYKCKECGSVFNKNSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRI
... : : :.: :::..::. : :. ::::::::::.::.:::::: :..:... . :
NP_998 HYIIHTGEKPYECIECGKAFNRRSYLTWHQQIHTGVKPFECNECGKAFCESADLIQHYII
330 340 350 360 370 380
100 110 120 130 140 150
pF1KB9 HTGEKPCKCVECGKVFNRRSHLLCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGE
:::::: ::.::::.::::::: ...:::::::::::::::.:.. :.:. :. :::::
NP_998 HTGEKPYKCMECGKAFNRRSHLKQHQRIHTGEKPYECSECGKAFTHCSTFVLHKRTHTGE
390 400 410 420 430 440
160 170 180 190 200 210
pF1KB9 KLFGCKECGKTFYYNSSLTRHMKIHTGEKPCKCSECGKTFTYHSVFFRHSMTHTAGKPYE
: . ::::::.: ..: ::..::::::: .: ::::.:. : . ::.. ::. ::::
NP_998 KPYECKECGKAFSDRADLIRHFSIHTGEKPYECVECGKAFNRSSHLTRHQQIHTGEKPYE
450 460 470 480 490 500
220 230 240 250 260 270
pF1KB9 CKECGKGFYYSYSLTRHTRSHTGEKPYECLEHRKAFGYHSAFAQQSKIHSGGKNL
: .:::.: : .: ::. ::::::::: : :::. :.......::.:
NP_998 CIQCGKAFCRSANLIRHSIIHTGEKPYECSECGKAFNRGSSLTHHQRIHTGRNPTIVTDV
510 520 530 540 550 560
NP_998 GRPFMTAQTSVNIQELLLGKEFLNITTEENLW
570 580 590 600
>--
initn: 1319 init1: 502 opt: 672 Z-score: 410.9 bits: 84.9 E(85289): 3.8e-16
Smith-Waterman score: 672; 60.4% identity (87.2% similar) in 149 aa overlap (1-148:150-298)
10 20 30
pF1KB9 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLH
:: .:::::. ::. ... :.:::: .:.
NP_998 QSKDQDGPSEMQEVHLKIGIGPQRGKLLEKMSSERDGLGSDDGVCTKITQKQVSTEGDLY
120 130 140 150 160 170
40 50 60 70 80
pF1KB9 ECDSQGPSKDTLVREGK-TYKCKECGSVFNKNSLLVRHQQIHTGVKPYECQECGKAFPEK
::::.:: :.:.:: : .:::.:::.::.::.:::.:..::: :::::: ::::.: ..
NP_998 ECDSHGPVTDALIREEKNSYKCEECGKVFKKNALLVQHERIHTQVKPYECTECGKTFSKS
180 190 200 210 220 230
90 100 110 120 130 140
pF1KB9 VDFVRPMRIHTGEKPCKCVECGKVFNRRSHLLCYRQIHTGEKPYECSECGKTFSYHSVFI
. ... . ::::::: ::.::::.::::::: ...::.:::::.::::::.:...:.:
NP_998 THLLQHLIIHTGEKPYKCMECGKAFNRRSHLTRHQRIHSGEKPYKCSECGKAFTHRSTFV
240 250 260 270 280 290
150 160 170 180 190 200
pF1KB9 QHRVTHTGEKLFGCKECGKTFYYNSSLTRHMKIHTGEKPCKCSECGKTFTYHSVFFRHSM
NP_998 LHHRSHTGEKPFVCKECGKAFRDRPGFIRHYIIHTGEKPYECIECGKAFNRRSYLTWHQQ
300 310 320 330 340 350
>>XP_011513163 (OMIM: 602277) PREDICTED: zinc finger pro (675 aa)
initn: 8616 init1: 935 opt: 943 Z-score: 563.7 bits: 113.4 E(85289): 1.2e-24
Smith-Waterman score: 943; 52.8% identity (77.8% similar) in 248 aa overlap (30-271:149-396)
10 20 30 40 50
pF1KB9 MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVREGKT------YKCKE
.:: . ..:.:. .: :::.:
XP_011 TQEPSPEETSTKRSIKQNSNPVKKEKSCKCNECGKAFSYCSALIRHQRTHTGEKPYKCNE
120 130 140 150 160 170
60 70 80 90 100 110
pF1KB9 CGSVFNKNSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKV
: ..:... :. ::.:::: :::.:..:::.: : .... .:::::::: :: ::::.
XP_011 CEKAFSRSENLINHQRIHTGDKPYKCDQCGKGFIEGPSLTQHQRIHTGEKPYKCDECGKA
180 190 200 210 220 230
120 130 140 150 160 170
pF1KB9 FNRRSHLLCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYN
:..:.::. ...:::::::: :.::::.:: .. :..:. ::::: : : :: ::: .
XP_011 FSQRTHLVQHQRIHTGEKPYTCNECGKAFSQRGHFMEHQKIHTGEKPFKCDECDKTFTRS
240 250 260 270 280 290
180 190 200 210 220 230
pF1KB9 SSLTRHMKIHTGEKPCKCSECGKTFTYHSVFFRHSMTHTAGKPYECKECGKGFYYSYSLT
. ::.:.::::::: ::.::::.:. :.:.:: : ::. :::::.::::.: .::
XP_011 THLTQHQKIHTGEKTYKCNECGKAFNGPSTFIRHHMIHTGEKPYECNECGKAFSQHSNLT
300 310 320 330 340 350
240 250 260 270
pF1KB9 RHTRSHTGEKPYECLEHRKAFGYHSAFAQQSKIHSGGKNL
.: ..:::::::.: : :.:.: :..::. :::.: :
XP_011 QHQKTHTGEKPYDCAECGKSFSYWSSLAQHLKIHTGEKPYKCNECGKAFSYCSSLTQHRR
360 370 380 390 400 410
XP_011 IHTREKPFECSECGKAFSYLSNLNQHQKTHTQEKAYECKECGKAFIRSSSLAKHERIHTG
420 430 440 450 460 470
>--
initn: 3940 init1: 830 opt: 845 Z-score: 508.3 bits: 103.1 E(85289): 1.4e-21
Smith-Waterman score: 845; 50.2% identity (76.7% similar) in 223 aa overlap (47-269:452-674)
20 30 40 50 60 70
pF1KB9 QVLQEQVSTGDNLHECDSQGPSKDTLVREGKTYKCKECGSVFNKNSLLVRHQQIHTGVKP
:.:.:::::..: ..: :..:..:::: ::
XP_011 REKPFECSECGKAFSYLSNLNQHQKTHTQEKAYECKECGKAFIRSSSLAKHERIHTGEKP
430 440 450 460 470 480
80 90 100 110 120 130
pF1KB9 YECQECGKAFPEKVDFVRPMRIHTGEKPCKCVECGKVFNRRSHLLCYRQIHTGEKPYECS
:.:.::::.: .... .:::::.: :: :::..::. :: ...:::: :::::.
XP_011 YQCHECGKTFSYGSSLIQHRKIHTGERPYKCNECGRAFNQNIHLTQHKRIHTGAKPYECA
490 500 510 520 530 540
140 150 160 170 180 190
pF1KB9 ECGKTFSYHSVFIQHRVTHTGEKLFGCKECGKTFYYNSSLTRHMKIHTGEKPCKCSECGK
::::.: . : . ::. ::: :: . :..: ::: .: ::.:..::::::: ::.:: :
XP_011 ECGKAFRHCSSLAQHQKTHTEEKPYQCNKCEKTFSQSSHLTQHQRIHTGEKPYKCNECDK
550 560 570 580 590 600
200 210 220 230 240 250
pF1KB9 TFTYHSVFFRHSMTHTAGKPYECKECGKGFYYSYSLTRHTRSHTGEKPYECLEHRKAFGY
.:. . . .:. :::. :::.:.:: : : : : .: : :.::::. : . :.: :
XP_011 AFSRSTHLTEHQNTHTGEKPYNCNECRKTFSQSTYLIQHQRIHSGEKPFGCNDCGKSFRY
610 620 630 640 650 660
260 270
pF1KB9 HSAFAQQSKIHSGGKNL
.::. .....: :
XP_011 RSALNKHQRLHPGI
670
273 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 08:27:30 2016 done: Sat Nov 5 08:27:31 2016
Total Scan time: 6.430 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]