Result of FASTA (omim) for
pF1KB9667
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9667, 310 aa
1>>>pF1KB9667 310 - 310 aa - 310 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.6157+/-0.000459; mu= 5.2516+/- 0.028
mean_var=343.8645+/-81.966, 0's: 0 Z-trim(117.9): 1465 B-trim: 1390 in 1/54
Lambda= 0.069164
statistics sampled from 28277 (30329) to 28277 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.72), E-opt: 0.2 (0.356), width: 16
Scan time: 8.100
The best scores are: opt bits E(85289)
XP_011529906 (OMIM: 614572) PREDICTED: zinc finger ( 310) 2131 226.6 4.9e-59
XP_011529907 (OMIM: 614572) PREDICTED: zinc finger ( 310) 2131 226.6 4.9e-59
XP_011529908 (OMIM: 614572) PREDICTED: zinc finger ( 310) 2131 226.6 4.9e-59
NP_777560 (OMIM: 614572) zinc finger protein 42 ho ( 310) 2131 226.6 4.9e-59
XP_011529909 (OMIM: 614572) PREDICTED: zinc finger ( 310) 2131 226.6 4.9e-59
NP_001291287 (OMIM: 614572) zinc finger protein 42 ( 310) 2131 226.6 4.9e-59
NP_003394 (OMIM: 600013) transcriptional repressor ( 414) 942 108.2 3e-23
NP_996806 (OMIM: 300570) transcription factor YY2 ( 372) 849 98.8 1.7e-20
NP_001278961 (OMIM: 194549) zinc finger protein 76 ( 515) 358 50.1 1.2e-05
XP_016866745 (OMIM: 194549) PREDICTED: zinc finger ( 515) 358 50.1 1.2e-05
XP_016866742 (OMIM: 194549) PREDICTED: zinc finger ( 524) 358 50.1 1.2e-05
XP_016866743 (OMIM: 194549) PREDICTED: zinc finger ( 524) 358 50.1 1.2e-05
XP_016866738 (OMIM: 194549) PREDICTED: zinc finger ( 570) 358 50.1 1.2e-05
NP_003418 (OMIM: 194549) zinc finger protein 76 is ( 570) 358 50.1 1.2e-05
XP_011513152 (OMIM: 194549) PREDICTED: zinc finger ( 579) 358 50.1 1.2e-05
XP_011513151 (OMIM: 194549) PREDICTED: zinc finger ( 579) 358 50.1 1.2e-05
XP_016873745 (OMIM: 603433) PREDICTED: zinc finger ( 606) 353 49.7 1.8e-05
NP_001269586 (OMIM: 603433) zinc finger protein 14 ( 607) 353 49.7 1.8e-05
XP_016873742 (OMIM: 603433) PREDICTED: zinc finger ( 621) 353 49.7 1.8e-05
XP_016873741 (OMIM: 603433) PREDICTED: zinc finger ( 622) 353 49.7 1.8e-05
NP_001269585 (OMIM: 603433) zinc finger protein 14 ( 637) 353 49.7 1.8e-05
XP_016873744 (OMIM: 603433) PREDICTED: zinc finger ( 637) 353 49.7 1.8e-05
XP_016873743 (OMIM: 603433) PREDICTED: zinc finger ( 637) 353 49.7 1.8e-05
NP_003433 (OMIM: 603433) zinc finger protein 143 i ( 638) 353 49.7 1.8e-05
XP_011518651 (OMIM: 603433) PREDICTED: zinc finger ( 638) 353 49.7 1.8e-05
XP_005253179 (OMIM: 603433) PREDICTED: zinc finger ( 652) 353 49.7 1.9e-05
XP_005253178 (OMIM: 603433) PREDICTED: zinc finger ( 653) 353 49.7 1.9e-05
XP_005253184 (OMIM: 603433) PREDICTED: zinc finger ( 435) 347 48.8 2.3e-05
XP_011539795 (OMIM: 600172) PREDICTED: metal regul ( 595) 345 48.9 3.1e-05
XP_016866746 (OMIM: 194549) PREDICTED: zinc finger ( 462) 343 48.5 3.1e-05
XP_016866744 (OMIM: 194549) PREDICTED: zinc finger ( 517) 343 48.6 3.3e-05
XP_011513158 (OMIM: 194549) PREDICTED: zinc finger ( 519) 343 48.6 3.3e-05
XP_011513157 (OMIM: 194549) PREDICTED: zinc finger ( 526) 343 48.6 3.3e-05
XP_011513156 (OMIM: 194549) PREDICTED: zinc finger ( 526) 343 48.6 3.3e-05
XP_016866741 (OMIM: 194549) PREDICTED: zinc finger ( 527) 343 48.6 3.3e-05
XP_016866740 (OMIM: 194549) PREDICTED: zinc finger ( 536) 343 48.6 3.3e-05
NP_005946 (OMIM: 600172) metal regulatory transcri ( 753) 345 49.0 3.5e-05
XP_011539793 (OMIM: 600172) PREDICTED: metal regul ( 753) 345 49.0 3.5e-05
XP_016866737 (OMIM: 194549) PREDICTED: zinc finger ( 582) 343 48.6 3.5e-05
XP_011513149 (OMIM: 194549) PREDICTED: zinc finger ( 591) 343 48.7 3.5e-05
XP_011513148 (OMIM: 194549) PREDICTED: zinc finger ( 591) 343 48.7 3.5e-05
XP_005259428 (OMIM: 610671) PREDICTED: zinc finger (1055) 345 49.3 4.2e-05
NP_149104 (OMIM: 610671) zinc finger protein 628 [ (1059) 345 49.3 4.2e-05
NP_001027453 (OMIM: 601878) Krueppel-like factor 1 ( 469) 332 47.4 6.7e-05
NP_005646 (OMIM: 601878) Krueppel-like factor 10 i ( 480) 332 47.4 6.7e-05
NP_001317590 (OMIM: 300265,306955,314390) zinc fin ( 457) 323 46.5 0.00012
NP_003404 (OMIM: 300265,306955,314390) zinc finger ( 467) 323 46.5 0.00012
XP_011519412 (OMIM: 603073,609637) PREDICTED: zinc ( 427) 322 46.3 0.00013
NP_003403 (OMIM: 600470,616602) zinc finger protei ( 447) 321 46.3 0.00014
NP_009060 (OMIM: 603073,609637) zinc finger protei ( 532) 322 46.5 0.00014
>>XP_011529906 (OMIM: 614572) PREDICTED: zinc finger pro (310 aa)
initn: 2131 init1: 2131 opt: 2131 Z-score: 1180.9 bits: 226.6 E(85289): 4.9e-59
Smith-Waterman score: 2131; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310)
10 20 30 40 50 60
pF1KB9 MSQQLKKRAKTRHQKGLGGRAPSGAKPRQGKSSQDLQAEIEPVSAVWALCDGYVCYEPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSQQLKKRAKTRHQKGLGGRAPSGAKPRQGKSSQDLQAEIEPVSAVWALCDGYVCYEPGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 QALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 EYMKKGVKKELPQKIVGENSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EYMKKGVKKELPQKIVGENSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 EYDSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EYDSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHA
250 260 270 280 290 300
310
pF1KB9 NTNKNEQEGK
::::::::::
XP_011 NTNKNEQEGK
310
>>XP_011529907 (OMIM: 614572) PREDICTED: zinc finger pro (310 aa)
initn: 2131 init1: 2131 opt: 2131 Z-score: 1180.9 bits: 226.6 E(85289): 4.9e-59
Smith-Waterman score: 2131; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310)
10 20 30 40 50 60
pF1KB9 MSQQLKKRAKTRHQKGLGGRAPSGAKPRQGKSSQDLQAEIEPVSAVWALCDGYVCYEPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSQQLKKRAKTRHQKGLGGRAPSGAKPRQGKSSQDLQAEIEPVSAVWALCDGYVCYEPGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 QALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 EYMKKGVKKELPQKIVGENSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EYMKKGVKKELPQKIVGENSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 EYDSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EYDSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHA
250 260 270 280 290 300
310
pF1KB9 NTNKNEQEGK
::::::::::
XP_011 NTNKNEQEGK
310
>>XP_011529908 (OMIM: 614572) PREDICTED: zinc finger pro (310 aa)
initn: 2131 init1: 2131 opt: 2131 Z-score: 1180.9 bits: 226.6 E(85289): 4.9e-59
Smith-Waterman score: 2131; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310)
10 20 30 40 50 60
pF1KB9 MSQQLKKRAKTRHQKGLGGRAPSGAKPRQGKSSQDLQAEIEPVSAVWALCDGYVCYEPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSQQLKKRAKTRHQKGLGGRAPSGAKPRQGKSSQDLQAEIEPVSAVWALCDGYVCYEPGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 QALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 EYMKKGVKKELPQKIVGENSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EYMKKGVKKELPQKIVGENSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 EYDSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EYDSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHA
250 260 270 280 290 300
310
pF1KB9 NTNKNEQEGK
::::::::::
XP_011 NTNKNEQEGK
310
>>NP_777560 (OMIM: 614572) zinc finger protein 42 homolo (310 aa)
initn: 2131 init1: 2131 opt: 2131 Z-score: 1180.9 bits: 226.6 E(85289): 4.9e-59
Smith-Waterman score: 2131; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310)
10 20 30 40 50 60
pF1KB9 MSQQLKKRAKTRHQKGLGGRAPSGAKPRQGKSSQDLQAEIEPVSAVWALCDGYVCYEPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 MSQQLKKRAKTRHQKGLGGRAPSGAKPRQGKSSQDLQAEIEPVSAVWALCDGYVCYEPGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 QALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 QALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 EYMKKGVKKELPQKIVGENSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 EYMKKGVKKELPQKIVGENSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 EYDSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 EYDSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 GEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHA
250 260 270 280 290 300
310
pF1KB9 NTNKNEQEGK
::::::::::
NP_777 NTNKNEQEGK
310
>>XP_011529909 (OMIM: 614572) PREDICTED: zinc finger pro (310 aa)
initn: 2131 init1: 2131 opt: 2131 Z-score: 1180.9 bits: 226.6 E(85289): 4.9e-59
Smith-Waterman score: 2131; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310)
10 20 30 40 50 60
pF1KB9 MSQQLKKRAKTRHQKGLGGRAPSGAKPRQGKSSQDLQAEIEPVSAVWALCDGYVCYEPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSQQLKKRAKTRHQKGLGGRAPSGAKPRQGKSSQDLQAEIEPVSAVWALCDGYVCYEPGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 QALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 EYMKKGVKKELPQKIVGENSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EYMKKGVKKELPQKIVGENSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 EYDSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EYDSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHA
250 260 270 280 290 300
310
pF1KB9 NTNKNEQEGK
::::::::::
XP_011 NTNKNEQEGK
310
>>NP_001291287 (OMIM: 614572) zinc finger protein 42 hom (310 aa)
initn: 2131 init1: 2131 opt: 2131 Z-score: 1180.9 bits: 226.6 E(85289): 4.9e-59
Smith-Waterman score: 2131; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310)
10 20 30 40 50 60
pF1KB9 MSQQLKKRAKTRHQKGLGGRAPSGAKPRQGKSSQDLQAEIEPVSAVWALCDGYVCYEPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSQQLKKRAKTRHQKGLGGRAPSGAKPRQGKSSQDLQAEIEPVSAVWALCDGYVCYEPGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 QALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 EYMKKGVKKELPQKIVGENSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EYMKKGVKKELPQKIVGENSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 EYDSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EYDSLSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHA
250 260 270 280 290 300
310
pF1KB9 NTNKNEQEGK
::::::::::
NP_001 NTNKNEQEGK
310
>>NP_003394 (OMIM: 600013) transcriptional repressor pro (414 aa)
initn: 1169 init1: 904 opt: 942 Z-score: 538.5 bits: 108.2 E(85289): 3e-23
Smith-Waterman score: 942; 66.0% identity (84.0% similar) in 212 aa overlap (99-306:203-414)
70 80 90 100 110 120
pF1KB9 SDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEAS-SLECSLEYMKKGV
:: ..:.. :..:. :. :: .
NP_003 KKGGGKKSGKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIKTLEGEFSVTMWSSDEKKDI
180 190 200 210 220 230
130 140 150 160 170 180
pF1KB9 KKE--LPQKIVGENSL-EYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEYDS
.: . ..:.:::: .::::::::::::::::::::::::::::::: :: :: :.
NP_003 DHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKEDDA
240 250 260 270 280 290
190 200 210 220 230 240
pF1KB9 LSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGEKP
.::::..:::. .:. .:.:::: :::: ::::::::::::::::::: ::::::::
NP_003 PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKP
300 310 320 330 340 350
250 260 270 280 290 300
pF1KB9 FRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANTNK
:.:::::::::::::::::::::::::.. .::::.:::..: ::.:::.::::::....
NP_003 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN
360 370 380 390 400 410
310
pF1KB9 NEQEGK
:.
NP_003 NQ
>>NP_996806 (OMIM: 300570) transcription factor YY2 [Hom (372 aa)
initn: 1051 init1: 633 opt: 849 Z-score: 488.8 bits: 98.8 E(85289): 1.7e-20
Smith-Waterman score: 849; 62.4% identity (80.7% similar) in 202 aa overlap (108-305:171-371)
80 90 100 110 120 130
pF1KB9 RGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSLEYMKKGVKKELPQKIVG
:: .....:: . . . . : ::
NP_996 PSKKPSGKSATSTEANPAGSSSSLGTRKWEQKQMQVKTLEGEFSVTMWSPNDNNDQGAVG
150 160 170 180 190 200
140 150 160 170 180 190
pF1KB9 ENSLE----YSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEYDSLSAIACPQS
:.. : ::::. ::::::::.::::::::::::::.. :: .: . ... : :
NP_996 EGQAENPPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTKVKPKRSKG-EPPKTVPCSYS
210 220 230 240 250
200 210 220 230 240 250
pF1KB9 GCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGEKPFRCTFEGCG
:: . .:. ::.:::: ::::: ::::::::::.:::::.:: :::::::::.:::::::
NP_996 GCEKMFRDYAAMRKHLHIHGPRVHVCAECGKAFLESSKLRRHQLVHTGEKPFQCTFEGCG
260 270 280 290 300 310
260 270 280 290 300 310
pF1KB9 KRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANTNKNEQEGK
::::::::::::.:::::.: :::::. :::.: ::.:::.:::::..:..:
NP_996 KRFSLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKTKNNP
320 330 340 350 360 370
>>NP_001278961 (OMIM: 194549) zinc finger protein 76 iso (515 aa)
initn: 549 init1: 300 opt: 358 Z-score: 222.6 bits: 50.1 E(85289): 1.2e-05
Smith-Waterman score: 361; 32.3% identity (56.5% similar) in 232 aa overlap (80-299:57-279)
50 60 70 80 90 100
pF1KB9 CDGYVCYEPGPQALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQK
: .::. ::. :. :... .. . .
NP_001 KLLEGQVIQLEDGTTAYIHQVTVQKEALSFEDGQPVQLEDG---SMAYIHRTPREGYDPS
30 40 50 60 70 80
110 120 130 140 150 160
pF1KB9 VFEASSLE-CSLEYMKKGVKKELPQKIVGENSLEYSEYMTG-KKLPPGGIPGIDLSDPKQ
..:: .:: : :... : . .:... . .: . : :.. .
NP_001 TLEAVQLEDGSTAYIHH------PVAVPSESTILAVQTEVGLEDLAAEDDEGFSADAVVA
90 100 110 120 130
170 180 190 200 210
pF1KB9 LAEFARK-----KPPINKEYDSLS--AIACPQSGCTRKLRNRAALRKHLLIH-GPRDHVC
: ..: : . : : . .... :. : .:: : . :. : : : : . :
NP_001 LEQYASKVLHDSQIPRNGKGQQVGDRAFRCGYKGCGRLYTTAHHLKVHERAHTGDRPYRC
140 150 160 170 180 190
220 230 240 250 260 270
pF1KB9 --AECGKAFVESSKLKRHFLVHTGEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVC
:::::. . :: : .::::::..: : :.: :. . .:. ::: ::::. : :
NP_001 DFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQC
200 210 220 230 240 250
280 290 300 310
pF1KB9 PFQGCNRRFIQSNNLKAHILTHANTNKNEQEGK
::.::.: : :: :.:. ::
NP_001 PFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVC
260 270 280 290 300 310
>>XP_016866745 (OMIM: 194549) PREDICTED: zinc finger pro (515 aa)
initn: 549 init1: 300 opt: 358 Z-score: 222.6 bits: 50.1 E(85289): 1.2e-05
Smith-Waterman score: 361; 32.3% identity (56.5% similar) in 232 aa overlap (80-299:57-279)
50 60 70 80 90 100
pF1KB9 CDGYVCYEPGPQALGGDDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQK
: .::. ::. :. :... .. . .
XP_016 KLLEGQVIQLEDGTTAYIHQVTVQKEALSFEDGQPVQLEDG---SMAYIHRTPREGYDPS
30 40 50 60 70 80
110 120 130 140 150 160
pF1KB9 VFEASSLE-CSLEYMKKGVKKELPQKIVGENSLEYSEYMTG-KKLPPGGIPGIDLSDPKQ
..:: .:: : :... : . .:... . .: . : :.. .
XP_016 TLEAVQLEDGSTAYIHH------PVAVPSESTILAVQTEVGLEDLAAEDDEGFSADAVVA
90 100 110 120 130
170 180 190 200 210
pF1KB9 LAEFARK-----KPPINKEYDSLS--AIACPQSGCTRKLRNRAALRKHLLIH-GPRDHVC
: ..: : . : : . .... :. : .:: : . :. : : : : . :
XP_016 LEQYASKVLHDSQIPRNGKGQQVGDRAFRCGYKGCGRLYTTAHHLKVHERAHTGDRPYRC
140 150 160 170 180 190
220 230 240 250 260 270
pF1KB9 --AECGKAFVESSKLKRHFLVHTGEKPFRCTFEGCGKRFSLDFNLRTHVRIHTGEKRFVC
:::::. . :: : .::::::..: : :.: :. . .:. ::: ::::. : :
XP_016 DFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQC
200 210 220 230 240 250
280 290 300 310
pF1KB9 PFQGCNRRFIQSNNLKAHILTHANTNKNEQEGK
::.::.: : :: :.:. ::
XP_016 PFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVC
260 270 280 290 300 310
310 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:05:08 2016 done: Fri Nov 4 18:05:10 2016
Total Scan time: 8.100 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]