Result of FASTA (omim) for
pF1KB9664
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9664, 458 aa
1>>>pF1KB9664 458 - 458 aa - 458 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3731+/-0.00067; mu= 8.9039+/- 0.041
mean_var=287.1461+/-58.967, 0's: 0 Z-trim(112.9): 2026 B-trim: 118 in 2/51
Lambda= 0.075687
statistics sampled from 19767 (22069) to 19767 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.591), E-opt: 0.2 (0.259), width: 16
Scan time: 8.960
The best scores are: opt bits E(85289)
NP_001092752 (OMIM: 601069) zinc finger protein 23 ( 458) 3237 368.0 2.9e-101
XP_005271889 (OMIM: 601069) PREDICTED: zinc finger ( 458) 3237 368.0 2.9e-101
XP_011538540 (OMIM: 601069) PREDICTED: zinc finger ( 458) 3237 368.0 2.9e-101
NP_001092753 (OMIM: 601069) zinc finger protein 23 ( 458) 3237 368.0 2.9e-101
NP_001311278 (OMIM: 601069) zinc finger protein 23 ( 458) 3237 368.0 2.9e-101
NP_001311279 (OMIM: 601069) zinc finger protein 23 ( 458) 3237 368.0 2.9e-101
NP_005665 (OMIM: 601069) zinc finger protein 239 i ( 458) 3237 368.0 2.9e-101
NP_001092754 (OMIM: 601069) zinc finger protein 23 ( 458) 3237 368.0 2.9e-101
NP_001311280 (OMIM: 601069) zinc finger protein 23 ( 458) 3237 368.0 2.9e-101
XP_006718066 (OMIM: 601069) PREDICTED: zinc finger ( 458) 3237 368.0 2.9e-101
NP_001311276 (OMIM: 601069) zinc finger protein 23 ( 458) 3237 368.0 2.9e-101
NP_001311277 (OMIM: 601069) zinc finger protein 23 ( 458) 3237 368.0 2.9e-101
XP_016872229 (OMIM: 601069) PREDICTED: zinc finger ( 500) 3237 368.1 3.1e-101
XP_011538536 (OMIM: 601069) PREDICTED: zinc finger ( 500) 3237 368.1 3.1e-101
NP_001311281 (OMIM: 601069) zinc finger protein 23 ( 500) 3237 368.1 3.1e-101
XP_006718064 (OMIM: 601069) PREDICTED: zinc finger ( 500) 3237 368.1 3.1e-101
XP_011538537 (OMIM: 601069) PREDICTED: zinc finger ( 500) 3237 368.1 3.1e-101
XP_011538538 (OMIM: 601069) PREDICTED: zinc finger ( 500) 3237 368.1 3.1e-101
XP_011538539 (OMIM: 601069) PREDICTED: zinc finger ( 500) 3237 368.1 3.1e-101
NP_001311282 (OMIM: 601069) zinc finger protein 23 ( 571) 3237 368.2 3.3e-101
XP_011538534 (OMIM: 601069) PREDICTED: zinc finger ( 602) 3237 368.2 3.4e-101
XP_016873758 (OMIM: 605015) PREDICTED: zinc finger ( 592) 1382 165.6 3.2e-40
XP_006718372 (OMIM: 605015) PREDICTED: zinc finger ( 592) 1382 165.6 3.2e-40
XP_011518659 (OMIM: 605015) PREDICTED: zinc finger ( 592) 1382 165.6 3.2e-40
XP_005253186 (OMIM: 605015) PREDICTED: zinc finger ( 592) 1382 165.6 3.2e-40
XP_006718371 (OMIM: 605015) PREDICTED: zinc finger ( 606) 1382 165.6 3.2e-40
XP_005253185 (OMIM: 605015) PREDICTED: zinc finger ( 606) 1382 165.6 3.2e-40
NP_037381 (OMIM: 605015) zinc finger protein 214 [ ( 606) 1382 165.6 3.2e-40
XP_011518657 (OMIM: 605015) PREDICTED: zinc finger ( 617) 1382 165.7 3.3e-40
XP_016882719 (OMIM: 194554) PREDICTED: zinc finger ( 646) 1312 158.0 6.7e-38
XP_016882718 (OMIM: 194554) PREDICTED: zinc finger ( 646) 1312 158.0 6.7e-38
XP_016882717 (OMIM: 194554) PREDICTED: zinc finger ( 646) 1312 158.0 6.7e-38
XP_016882715 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_016882706 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_016882713 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_016882712 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
NP_003416 (OMIM: 194554) zinc finger protein 45 [H ( 682) 1312 158.1 6.9e-38
XP_016882707 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_011525575 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_016882711 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_016882708 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_016882709 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_011525571 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_016882716 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_011525569 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_016882710 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_016882714 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_011525573 (OMIM: 194554) PREDICTED: zinc finger ( 682) 1312 158.1 6.9e-38
XP_005259469 (OMIM: 604749) PREDICTED: zinc finger ( 734) 1300 156.8 1.8e-37
NP_004225 (OMIM: 604749) zinc finger protein 235 [ ( 738) 1300 156.8 1.8e-37
>>NP_001092752 (OMIM: 601069) zinc finger protein 239 is (458 aa)
initn: 3237 init1: 3237 opt: 3237 Z-score: 1938.9 bits: 368.0 E(85289): 2.9e-101
Smith-Waterman score: 3237; 99.6% identity (99.8% similar) in 458 aa overlap (1-458:1-458)
10 20 30 40 50 60
pF1KB9 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRGHTEEKPCD
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
NP_001 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRAHTEEKPCD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HNNCGKILNTSPDGHPYEKIHTAEKQYEGSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
NP_001 HNNCGKILNTSPDGHPYEKIHTAEKQYECSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
370 380 390 400 410 420
430 440 450
pF1KB9 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
::::::::::::::::::::::::::::::::::::::
NP_001 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
430 440 450
>>XP_005271889 (OMIM: 601069) PREDICTED: zinc finger pro (458 aa)
initn: 3237 init1: 3237 opt: 3237 Z-score: 1938.9 bits: 368.0 E(85289): 2.9e-101
Smith-Waterman score: 3237; 99.6% identity (99.8% similar) in 458 aa overlap (1-458:1-458)
10 20 30 40 50 60
pF1KB9 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRGHTEEKPCD
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
XP_005 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRAHTEEKPCD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HNNCGKILNTSPDGHPYEKIHTAEKQYEGSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
XP_005 HNNCGKILNTSPDGHPYEKIHTAEKQYECSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
370 380 390 400 410 420
430 440 450
pF1KB9 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
::::::::::::::::::::::::::::::::::::::
XP_005 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
430 440 450
>>XP_011538540 (OMIM: 601069) PREDICTED: zinc finger pro (458 aa)
initn: 3237 init1: 3237 opt: 3237 Z-score: 1938.9 bits: 368.0 E(85289): 2.9e-101
Smith-Waterman score: 3237; 99.6% identity (99.8% similar) in 458 aa overlap (1-458:1-458)
10 20 30 40 50 60
pF1KB9 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRGHTEEKPCD
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
XP_011 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRAHTEEKPCD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HNNCGKILNTSPDGHPYEKIHTAEKQYEGSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
XP_011 HNNCGKILNTSPDGHPYEKIHTAEKQYECSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
370 380 390 400 410 420
430 440 450
pF1KB9 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
::::::::::::::::::::::::::::::::::::::
XP_011 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
430 440 450
>>NP_001092753 (OMIM: 601069) zinc finger protein 239 is (458 aa)
initn: 3237 init1: 3237 opt: 3237 Z-score: 1938.9 bits: 368.0 E(85289): 2.9e-101
Smith-Waterman score: 3237; 99.6% identity (99.8% similar) in 458 aa overlap (1-458:1-458)
10 20 30 40 50 60
pF1KB9 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRGHTEEKPCD
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
NP_001 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRAHTEEKPCD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HNNCGKILNTSPDGHPYEKIHTAEKQYEGSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
NP_001 HNNCGKILNTSPDGHPYEKIHTAEKQYECSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
370 380 390 400 410 420
430 440 450
pF1KB9 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
::::::::::::::::::::::::::::::::::::::
NP_001 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
430 440 450
>>NP_001311278 (OMIM: 601069) zinc finger protein 239 is (458 aa)
initn: 3237 init1: 3237 opt: 3237 Z-score: 1938.9 bits: 368.0 E(85289): 2.9e-101
Smith-Waterman score: 3237; 99.6% identity (99.8% similar) in 458 aa overlap (1-458:1-458)
10 20 30 40 50 60
pF1KB9 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRGHTEEKPCD
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
NP_001 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRAHTEEKPCD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HNNCGKILNTSPDGHPYEKIHTAEKQYEGSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
NP_001 HNNCGKILNTSPDGHPYEKIHTAEKQYECSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
370 380 390 400 410 420
430 440 450
pF1KB9 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
::::::::::::::::::::::::::::::::::::::
NP_001 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
430 440 450
>>NP_001311279 (OMIM: 601069) zinc finger protein 239 is (458 aa)
initn: 3237 init1: 3237 opt: 3237 Z-score: 1938.9 bits: 368.0 E(85289): 2.9e-101
Smith-Waterman score: 3237; 99.6% identity (99.8% similar) in 458 aa overlap (1-458:1-458)
10 20 30 40 50 60
pF1KB9 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRGHTEEKPCD
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
NP_001 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRAHTEEKPCD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HNNCGKILNTSPDGHPYEKIHTAEKQYEGSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
NP_001 HNNCGKILNTSPDGHPYEKIHTAEKQYECSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
370 380 390 400 410 420
430 440 450
pF1KB9 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
::::::::::::::::::::::::::::::::::::::
NP_001 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
430 440 450
>>NP_005665 (OMIM: 601069) zinc finger protein 239 isofo (458 aa)
initn: 3237 init1: 3237 opt: 3237 Z-score: 1938.9 bits: 368.0 E(85289): 2.9e-101
Smith-Waterman score: 3237; 99.6% identity (99.8% similar) in 458 aa overlap (1-458:1-458)
10 20 30 40 50 60
pF1KB9 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRGHTEEKPCD
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
NP_005 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRAHTEEKPCD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HNNCGKILNTSPDGHPYEKIHTAEKQYEGSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
NP_005 HNNCGKILNTSPDGHPYEKIHTAEKQYECSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
370 380 390 400 410 420
430 440 450
pF1KB9 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
::::::::::::::::::::::::::::::::::::::
NP_005 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
430 440 450
>>NP_001092754 (OMIM: 601069) zinc finger protein 239 is (458 aa)
initn: 3237 init1: 3237 opt: 3237 Z-score: 1938.9 bits: 368.0 E(85289): 2.9e-101
Smith-Waterman score: 3237; 99.6% identity (99.8% similar) in 458 aa overlap (1-458:1-458)
10 20 30 40 50 60
pF1KB9 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRGHTEEKPCD
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
NP_001 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRAHTEEKPCD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HNNCGKILNTSPDGHPYEKIHTAEKQYEGSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
NP_001 HNNCGKILNTSPDGHPYEKIHTAEKQYECSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
370 380 390 400 410 420
430 440 450
pF1KB9 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
::::::::::::::::::::::::::::::::::::::
NP_001 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
430 440 450
>>NP_001311280 (OMIM: 601069) zinc finger protein 239 is (458 aa)
initn: 3237 init1: 3237 opt: 3237 Z-score: 1938.9 bits: 368.0 E(85289): 2.9e-101
Smith-Waterman score: 3237; 99.6% identity (99.8% similar) in 458 aa overlap (1-458:1-458)
10 20 30 40 50 60
pF1KB9 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRGHTEEKPCD
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
NP_001 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRAHTEEKPCD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HNNCGKILNTSPDGHPYEKIHTAEKQYEGSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
NP_001 HNNCGKILNTSPDGHPYEKIHTAEKQYECSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
370 380 390 400 410 420
430 440 450
pF1KB9 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
::::::::::::::::::::::::::::::::::::::
NP_001 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
430 440 450
>>XP_006718066 (OMIM: 601069) PREDICTED: zinc finger pro (458 aa)
initn: 3237 init1: 3237 opt: 3237 Z-score: 1938.9 bits: 368.0 E(85289): 2.9e-101
Smith-Waterman score: 3237; 99.6% identity (99.8% similar) in 458 aa overlap (1-458:1-458)
10 20 30 40 50 60
pF1KB9 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MASTITGSQDCIVNHRGEVDGEPELDISPCQQWGEASSPISRNRDSVMTLQSGCFENIES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ETYLPLKVSSQIDTQDSSVKFCKNEPQDHQESRRLFVMEESTERKVIKGESCSENLQVKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRGHTEEKPCD
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
XP_006 VSDGQELASPLLNGEATCQNGQLKESLDPIDCNCKDIHGWKSQVVSCSQQRAHTEEKPCD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HNNCGKILNTSPDGHPYEKIHTAEKQYEGSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
XP_006 HNNCGKILNTSPDGHPYEKIHTAEKQYECSQCGKNFSQSSELLLHQRDHTEEKPYKCEQC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GKGFTRSSSLLIHQAVHTDEKPYKCDKCGKGFTRSSSLLIHHAVHTGEKPYKCDKCGKGF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SQSSKLHIHQRVHTGEKPYECEECGMSFSQRSNLHIHQRVHTGERPYKCGECGKGFSQSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NLHIHRCIHTGEKPYQCYECGKGFSQSSDLRIHLRVHTGEKPYHCGKCGKGFSQSSKLLI
370 380 390 400 410 420
430 440 450
pF1KB9 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
::::::::::::::::::::::::::::::::::::::
XP_006 HQRVHTGEKPYECSKCGKGFSQSSNLHIHQRVHKKDPR
430 440 450
458 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:03:50 2016 done: Fri Nov 4 18:03:52 2016
Total Scan time: 8.960 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]