Result of FASTA (omim) for
pF1KB9663
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9663, 224 aa
1>>>pF1KB9663 224 - 224 aa - 224 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6700+/-0.000563; mu= 9.4655+/- 0.035
mean_var=249.3531+/-51.446, 0's: 0 Z-trim(115.1): 2035 B-trim: 186 in 2/51
Lambda= 0.081221
statistics sampled from 23042 (25339) to 23042 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.638), E-opt: 0.2 (0.297), width: 16
Scan time: 4.620
The best scores are: opt bits E(85289)
NP_008894 (OMIM: 194529) zinc finger protein 22 [H ( 224) 1579 197.9 1.2e-50
XP_006716174 (OMIM: 194510) PREDICTED: zinc finger ( 410) 758 102.1 1.5e-21
XP_016868072 (OMIM: 194510) PREDICTED: zinc finger ( 410) 758 102.1 1.5e-21
NP_001265221 (OMIM: 194510) zinc finger protein 3 ( 410) 758 102.1 1.5e-21
NP_001265220 (OMIM: 194510) zinc finger protein 3 ( 410) 758 102.1 1.5e-21
XP_016868071 (OMIM: 194510) PREDICTED: zinc finger ( 410) 758 102.1 1.5e-21
NP_116313 (OMIM: 194510) zinc finger protein 3 iso ( 446) 758 102.1 1.5e-21
NP_001265219 (OMIM: 194510) zinc finger protein 3 ( 446) 758 102.1 1.5e-21
NP_001265216 (OMIM: 194510) zinc finger protein 3 ( 446) 758 102.1 1.5e-21
NP_001265213 (OMIM: 194510) zinc finger protein 3 ( 446) 758 102.1 1.5e-21
NP_001305064 (OMIM: 194510) zinc finger protein 3 ( 446) 758 102.1 1.5e-21
NP_001305065 (OMIM: 194510) zinc finger protein 3 ( 453) 758 102.1 1.5e-21
XP_011513163 (OMIM: 602277) PREDICTED: zinc finger ( 675) 745 100.9 5.5e-21
NP_001305822 (OMIM: 602277) zinc finger protein 18 ( 675) 745 100.9 5.5e-21
NP_009080 (OMIM: 602277) zinc finger protein 184 i ( 751) 745 101.0 5.8e-21
NP_001305821 (OMIM: 602277) zinc finger protein 18 ( 751) 745 101.0 5.8e-21
NP_001305820 (OMIM: 602277) zinc finger protein 18 ( 751) 745 101.0 5.8e-21
NP_001273627 (OMIM: 194552) zinc finger protein 79 ( 364) 734 99.2 9.6e-21
XP_016869365 (OMIM: 194526) PREDICTED: zinc finger ( 499) 735 99.5 1.1e-20
XP_011515622 (OMIM: 194526) PREDICTED: zinc finger ( 499) 735 99.5 1.1e-20
NP_001273699 (OMIM: 194526) zinc finger protein 34 ( 520) 735 99.5 1.1e-20
XP_016869364 (OMIM: 194526) PREDICTED: zinc finger ( 539) 735 99.6 1.1e-20
NP_001273698 (OMIM: 194526) zinc finger protein 34 ( 539) 735 99.6 1.1e-20
XP_011515620 (OMIM: 194526) PREDICTED: zinc finger ( 539) 735 99.6 1.1e-20
XP_011515618 (OMIM: 194526) PREDICTED: zinc finger ( 539) 735 99.6 1.1e-20
XP_011515617 (OMIM: 194526) PREDICTED: zinc finger ( 539) 735 99.6 1.1e-20
NP_001273625 (OMIM: 194552) zinc finger protein 79 ( 474) 734 99.4 1.1e-20
XP_006717342 (OMIM: 194552) PREDICTED: zinc finger ( 474) 734 99.4 1.1e-20
NP_001273626 (OMIM: 194552) zinc finger protein 79 ( 474) 734 99.4 1.1e-20
NP_001309189 (OMIM: 194552) zinc finger protein 79 ( 474) 734 99.4 1.1e-20
XP_016869363 (OMIM: 194526) PREDICTED: zinc finger ( 560) 735 99.6 1.1e-20
XP_016869362 (OMIM: 194526) PREDICTED: zinc finger ( 560) 735 99.6 1.1e-20
NP_085057 (OMIM: 194526) zinc finger protein 34 is ( 560) 735 99.6 1.1e-20
XP_011515616 (OMIM: 194526) PREDICTED: zinc finger ( 560) 735 99.6 1.1e-20
XP_016869361 (OMIM: 194526) PREDICTED: zinc finger ( 560) 735 99.6 1.1e-20
NP_009066 (OMIM: 194552) zinc finger protein 79 is ( 498) 734 99.4 1.1e-20
XP_011540503 (OMIM: 611703) PREDICTED: zinc finger ( 452) 731 99.0 1.4e-20
NP_085137 (OMIM: 611703) zinc finger protein 436 [ ( 470) 731 99.0 1.4e-20
NP_001070663 (OMIM: 611703) zinc finger protein 43 ( 470) 731 99.0 1.4e-20
XP_005253186 (OMIM: 605015) PREDICTED: zinc finger ( 592) 727 98.7 2.2e-20
XP_016873758 (OMIM: 605015) PREDICTED: zinc finger ( 592) 727 98.7 2.2e-20
XP_011518659 (OMIM: 605015) PREDICTED: zinc finger ( 592) 727 98.7 2.2e-20
XP_006718372 (OMIM: 605015) PREDICTED: zinc finger ( 592) 727 98.7 2.2e-20
NP_037381 (OMIM: 605015) zinc finger protein 214 [ ( 606) 727 98.7 2.2e-20
XP_006718371 (OMIM: 605015) PREDICTED: zinc finger ( 606) 727 98.7 2.2e-20
XP_005253185 (OMIM: 605015) PREDICTED: zinc finger ( 606) 727 98.7 2.2e-20
XP_011518657 (OMIM: 605015) PREDICTED: zinc finger ( 617) 727 98.7 2.3e-20
NP_001276331 (OMIM: 604077) zinc finger protein 13 ( 616) 726 98.6 2.5e-20
XP_016882731 (OMIM: 604077) PREDICTED: zinc finger ( 621) 726 98.6 2.5e-20
XP_016882730 (OMIM: 604077) PREDICTED: zinc finger ( 628) 726 98.6 2.5e-20
>>NP_008894 (OMIM: 194529) zinc finger protein 22 [Homo (224 aa)
initn: 1579 init1: 1579 opt: 1579 Z-score: 1030.6 bits: 197.9 E(85289): 1.2e-50
Smith-Waterman score: 1579; 100.0% identity (100.0% similar) in 224 aa overlap (1-224:1-224)
10 20 30 40 50 60
pF1KB9 MRLAKPKAGISRSSSQGKAYENKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MRLAKPKAGISRSSSQGKAYENKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTEC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 EKSFSQSSTLFQHQKIHTGKKSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 EKSFSQSSTLFQHQKIHTGKKSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 KQSSNLIQHQRIHTGEKPYQCDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 KQSSNLIQHQRIHTGEKPYQCDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSS
130 140 150 160 170 180
190 200 210 220
pF1KB9 HLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWKAGTGRKSVAGLR
::::::::::::::::::::::::::::::::::::::::::::
NP_008 HLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWKAGTGRKSVAGLR
190 200 210 220
>>XP_006716174 (OMIM: 194510) PREDICTED: zinc finger pro (410 aa)
initn: 758 init1: 758 opt: 758 Z-score: 508.1 bits: 102.1 E(85289): 1.5e-21
Smith-Waterman score: 758; 69.2% identity (88.1% similar) in 143 aa overlap (52-194:189-331)
30 40 50 60 70 80
pF1KB9 NKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKK
.:::.:.:: :.::::: :.:::.::::.:
XP_006 VGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEK
160 170 180 190 200 210
90 100 110 120 130 140
pF1KB9 SHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQC
..:.::::.: :: :: :::::::::::.:.:::..:. ::.: .::::::::::: :
XP_006 PYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYAC
220 230 240 250 260 270
150 160 170 180 190 200
pF1KB9 DECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKN
.:::. ::.:: ::.::: :::::::.:.:::: ::::::: ::...: :::
XP_006 NECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECG
280 290 300 310 320 330
210 220
pF1KB9 IRVKTHLPSWKAGTGRKSVAGLR
XP_006 GKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSL
340 350 360 370 380 390
>--
initn: 287 init1: 287 opt: 287 Z-score: 209.8 bits: 46.9 E(85289): 6e-05
Smith-Waterman score: 287; 67.9% identity (83.9% similar) in 56 aa overlap (111-166:332-387)
90 100 110 120 130 140
pF1KB9 KSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQ
:.: ::: .: ::.:::::::::::.::.
XP_006 KPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYE
310 320 330 340 350 360
150 160 170 180 190 200
pF1KB9 CDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGK
:.:::. : :: :..::: ::::::
XP_006 CSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
370 380 390 400 410
>--
initn: 258 init1: 246 opt: 271 Z-score: 199.7 bits: 45.0 E(85289): 0.00022
Smith-Waterman score: 271; 34.6% identity (69.2% similar) in 133 aa overlap (11-135:58-188)
10 20 30
pF1KB9 MRLAKPKAGISRSSSQGKAYENKRK----TGRQRQKWGMT
.:. .. . :. :. :: .. ..
XP_006 EWKRLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQG
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB9 IRFDSSFSR---LRRSLDDKP-YKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSF
..: .. : :.: : ..: . .. .:.: .. ... :..:.: : :.::
XP_006 LKFKEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTV--EEKLTPRGERSEKYNDFGNSF
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB9 FQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSS
.::::.:.:. .:..:.:::::..::...:.::::::::::
XP_006 TVNSNLISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSS
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB9 HLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWK
XP_006 HLIQHQRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTH
210 220 230 240 250 260
>>XP_016868072 (OMIM: 194510) PREDICTED: zinc finger pro (410 aa)
initn: 758 init1: 758 opt: 758 Z-score: 508.1 bits: 102.1 E(85289): 1.5e-21
Smith-Waterman score: 758; 69.2% identity (88.1% similar) in 143 aa overlap (52-194:189-331)
30 40 50 60 70 80
pF1KB9 NKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKK
.:::.:.:: :.::::: :.:::.::::.:
XP_016 VGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEK
160 170 180 190 200 210
90 100 110 120 130 140
pF1KB9 SHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQC
..:.::::.: :: :: :::::::::::.:.:::..:. ::.: .::::::::::: :
XP_016 PYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYAC
220 230 240 250 260 270
150 160 170 180 190 200
pF1KB9 DECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKN
.:::. ::.:: ::.::: :::::::.:.:::: ::::::: ::...: :::
XP_016 NECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECG
280 290 300 310 320 330
210 220
pF1KB9 IRVKTHLPSWKAGTGRKSVAGLR
XP_016 GKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSL
340 350 360 370 380 390
>--
initn: 287 init1: 287 opt: 287 Z-score: 209.8 bits: 46.9 E(85289): 6e-05
Smith-Waterman score: 287; 67.9% identity (83.9% similar) in 56 aa overlap (111-166:332-387)
90 100 110 120 130 140
pF1KB9 KSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQ
:.: ::: .: ::.:::::::::::.::.
XP_016 KPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYE
310 320 330 340 350 360
150 160 170 180 190 200
pF1KB9 CDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGK
:.:::. : :: :..::: ::::::
XP_016 CSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
370 380 390 400 410
>--
initn: 258 init1: 246 opt: 271 Z-score: 199.7 bits: 45.0 E(85289): 0.00022
Smith-Waterman score: 271; 34.6% identity (69.2% similar) in 133 aa overlap (11-135:58-188)
10 20 30
pF1KB9 MRLAKPKAGISRSSSQGKAYENKRK----TGRQRQKWGMT
.:. .. . :. :. :: .. ..
XP_016 EWKRLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQG
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB9 IRFDSSFSR---LRRSLDDKP-YKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSF
..: .. : :.: : ..: . .. .:.: .. ... :..:.: : :.::
XP_016 LKFKEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTV--EEKLTPRGERSEKYNDFGNSF
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB9 FQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSS
.::::.:.:. .:..:.:::::..::...:.::::::::::
XP_016 TVNSNLISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSS
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB9 HLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWK
XP_016 HLIQHQRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTH
210 220 230 240 250 260
>>NP_001265221 (OMIM: 194510) zinc finger protein 3 isof (410 aa)
initn: 758 init1: 758 opt: 758 Z-score: 508.1 bits: 102.1 E(85289): 1.5e-21
Smith-Waterman score: 758; 69.2% identity (88.1% similar) in 143 aa overlap (52-194:189-331)
30 40 50 60 70 80
pF1KB9 NKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKK
.:::.:.:: :.::::: :.:::.::::.:
NP_001 VGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEK
160 170 180 190 200 210
90 100 110 120 130 140
pF1KB9 SHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQC
..:.::::.: :: :: :::::::::::.:.:::..:. ::.: .::::::::::: :
NP_001 PYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYAC
220 230 240 250 260 270
150 160 170 180 190 200
pF1KB9 DECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKN
.:::. ::.:: ::.::: :::::::.:.:::: ::::::: ::...: :::
NP_001 NECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECG
280 290 300 310 320 330
210 220
pF1KB9 IRVKTHLPSWKAGTGRKSVAGLR
NP_001 GKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSL
340 350 360 370 380 390
>--
initn: 287 init1: 287 opt: 287 Z-score: 209.8 bits: 46.9 E(85289): 6e-05
Smith-Waterman score: 287; 67.9% identity (83.9% similar) in 56 aa overlap (111-166:332-387)
90 100 110 120 130 140
pF1KB9 KSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQ
:.: ::: .: ::.:::::::::::.::.
NP_001 KPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYE
310 320 330 340 350 360
150 160 170 180 190 200
pF1KB9 CDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGK
:.:::. : :: :..::: ::::::
NP_001 CSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
370 380 390 400 410
>--
initn: 258 init1: 246 opt: 271 Z-score: 199.7 bits: 45.0 E(85289): 0.00022
Smith-Waterman score: 271; 34.6% identity (69.2% similar) in 133 aa overlap (11-135:58-188)
10 20 30
pF1KB9 MRLAKPKAGISRSSSQGKAYENKRK----TGRQRQKWGMT
.:. .. . :. :. :: .. ..
NP_001 EWKRLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQG
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB9 IRFDSSFSR---LRRSLDDKP-YKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSF
..: .. : :.: : ..: . .. .:.: .. ... :..:.: : :.::
NP_001 LKFKEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTV--EEKLTPRGERSEKYNDFGNSF
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB9 FQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSS
.::::.:.:. .:..:.:::::..::...:.::::::::::
NP_001 TVNSNLISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSS
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB9 HLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWK
NP_001 HLIQHQRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTH
210 220 230 240 250 260
>>NP_001265220 (OMIM: 194510) zinc finger protein 3 isof (410 aa)
initn: 758 init1: 758 opt: 758 Z-score: 508.1 bits: 102.1 E(85289): 1.5e-21
Smith-Waterman score: 758; 69.2% identity (88.1% similar) in 143 aa overlap (52-194:189-331)
30 40 50 60 70 80
pF1KB9 NKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKK
.:::.:.:: :.::::: :.:::.::::.:
NP_001 VGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEK
160 170 180 190 200 210
90 100 110 120 130 140
pF1KB9 SHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQC
..:.::::.: :: :: :::::::::::.:.:::..:. ::.: .::::::::::: :
NP_001 PYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYAC
220 230 240 250 260 270
150 160 170 180 190 200
pF1KB9 DECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKN
.:::. ::.:: ::.::: :::::::.:.:::: ::::::: ::...: :::
NP_001 NECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECG
280 290 300 310 320 330
210 220
pF1KB9 IRVKTHLPSWKAGTGRKSVAGLR
NP_001 GKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSL
340 350 360 370 380 390
>--
initn: 287 init1: 287 opt: 287 Z-score: 209.8 bits: 46.9 E(85289): 6e-05
Smith-Waterman score: 287; 67.9% identity (83.9% similar) in 56 aa overlap (111-166:332-387)
90 100 110 120 130 140
pF1KB9 KSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQ
:.: ::: .: ::.:::::::::::.::.
NP_001 KPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYE
310 320 330 340 350 360
150 160 170 180 190 200
pF1KB9 CDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGK
:.:::. : :: :..::: ::::::
NP_001 CSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
370 380 390 400 410
>--
initn: 258 init1: 246 opt: 271 Z-score: 199.7 bits: 45.0 E(85289): 0.00022
Smith-Waterman score: 271; 34.6% identity (69.2% similar) in 133 aa overlap (11-135:58-188)
10 20 30
pF1KB9 MRLAKPKAGISRSSSQGKAYENKRK----TGRQRQKWGMT
.:. .. . :. :. :: .. ..
NP_001 EWKRLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQG
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB9 IRFDSSFSR---LRRSLDDKP-YKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSF
..: .. : :.: : ..: . .. .:.: .. ... :..:.: : :.::
NP_001 LKFKEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTV--EEKLTPRGERSEKYNDFGNSF
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB9 FQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSS
.::::.:.:. .:..:.:::::..::...:.::::::::::
NP_001 TVNSNLISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSS
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB9 HLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWK
NP_001 HLIQHQRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTH
210 220 230 240 250 260
>>XP_016868071 (OMIM: 194510) PREDICTED: zinc finger pro (410 aa)
initn: 758 init1: 758 opt: 758 Z-score: 508.1 bits: 102.1 E(85289): 1.5e-21
Smith-Waterman score: 758; 69.2% identity (88.1% similar) in 143 aa overlap (52-194:189-331)
30 40 50 60 70 80
pF1KB9 NKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKK
.:::.:.:: :.::::: :.:::.::::.:
XP_016 VGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEK
160 170 180 190 200 210
90 100 110 120 130 140
pF1KB9 SHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQC
..:.::::.: :: :: :::::::::::.:.:::..:. ::.: .::::::::::: :
XP_016 PYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYAC
220 230 240 250 260 270
150 160 170 180 190 200
pF1KB9 DECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKN
.:::. ::.:: ::.::: :::::::.:.:::: ::::::: ::...: :::
XP_016 NECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECG
280 290 300 310 320 330
210 220
pF1KB9 IRVKTHLPSWKAGTGRKSVAGLR
XP_016 GKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSL
340 350 360 370 380 390
>--
initn: 287 init1: 287 opt: 287 Z-score: 209.8 bits: 46.9 E(85289): 6e-05
Smith-Waterman score: 287; 67.9% identity (83.9% similar) in 56 aa overlap (111-166:332-387)
90 100 110 120 130 140
pF1KB9 KSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQ
:.: ::: .: ::.:::::::::::.::.
XP_016 KPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYE
310 320 330 340 350 360
150 160 170 180 190 200
pF1KB9 CDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGK
:.:::. : :: :..::: ::::::
XP_016 CSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
370 380 390 400 410
>--
initn: 258 init1: 246 opt: 271 Z-score: 199.7 bits: 45.0 E(85289): 0.00022
Smith-Waterman score: 271; 34.6% identity (69.2% similar) in 133 aa overlap (11-135:58-188)
10 20 30
pF1KB9 MRLAKPKAGISRSSSQGKAYENKRK----TGRQRQKWGMT
.:. .. . :. :. :: .. ..
XP_016 EWKRLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQG
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB9 IRFDSSFSR---LRRSLDDKP-YKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSF
..: .. : :.: : ..: . .. .:.: .. ... :..:.: : :.::
XP_016 LKFKEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTV--EEKLTPRGERSEKYNDFGNSF
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB9 FQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSS
.::::.:.:. .:..:.:::::..::...:.::::::::::
XP_016 TVNSNLISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSS
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB9 HLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWK
XP_016 HLIQHQRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTH
210 220 230 240 250 260
>>NP_116313 (OMIM: 194510) zinc finger protein 3 isoform (446 aa)
initn: 758 init1: 758 opt: 758 Z-score: 507.7 bits: 102.1 E(85289): 1.5e-21
Smith-Waterman score: 758; 69.2% identity (88.1% similar) in 143 aa overlap (52-194:225-367)
30 40 50 60 70 80
pF1KB9 NKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKK
.:::.:.:: :.::::: :.:::.::::.:
NP_116 VGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEK
200 210 220 230 240 250
90 100 110 120 130 140
pF1KB9 SHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQC
..:.::::.: :: :: :::::::::::.:.:::..:. ::.: .::::::::::: :
NP_116 PYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYAC
260 270 280 290 300 310
150 160 170 180 190 200
pF1KB9 DECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKN
.:::. ::.:: ::.::: :::::::.:.:::: ::::::: ::...: :::
NP_116 NECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECG
320 330 340 350 360 370
210 220
pF1KB9 IRVKTHLPSWKAGTGRKSVAGLR
NP_116 GKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSL
380 390 400 410 420 430
>--
initn: 287 init1: 287 opt: 287 Z-score: 209.5 bits: 46.9 E(85289): 6.3e-05
Smith-Waterman score: 287; 67.9% identity (83.9% similar) in 56 aa overlap (111-166:368-423)
90 100 110 120 130 140
pF1KB9 KSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQ
:.: ::: .: ::.:::::::::::.::.
NP_116 KPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYE
340 350 360 370 380 390
150 160 170 180 190 200
pF1KB9 CDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGK
:.:::. : :: :..::: ::::::
NP_116 CSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
400 410 420 430 440
>--
initn: 258 init1: 246 opt: 271 Z-score: 199.3 bits: 45.1 E(85289): 0.00023
Smith-Waterman score: 271; 34.6% identity (69.2% similar) in 133 aa overlap (11-135:94-224)
10 20 30
pF1KB9 MRLAKPKAGISRSSSQGKAYENKRK----TGRQRQKWGMT
.:. .. . :. :. :: .. ..
NP_116 EWKRLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQG
70 80 90 100 110 120
40 50 60 70 80 90
pF1KB9 IRFDSSFSR---LRRSLDDKP-YKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSF
..: .. : :.: : ..: . .. .:.: .. ... :..:.: : :.::
NP_116 LKFKEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTV--EEKLTPRGERSEKYNDFGNSF
130 140 150 160 170 180
100 110 120 130 140 150
pF1KB9 FQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSS
.::::.:.:. .:..:.:::::..::...:.::::::::::
NP_116 TVNSNLISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSS
190 200 210 220 230 240
160 170 180 190 200 210
pF1KB9 HLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWK
NP_116 HLIQHQRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTH
250 260 270 280 290 300
>>NP_001265219 (OMIM: 194510) zinc finger protein 3 isof (446 aa)
initn: 758 init1: 758 opt: 758 Z-score: 507.7 bits: 102.1 E(85289): 1.5e-21
Smith-Waterman score: 758; 69.2% identity (88.1% similar) in 143 aa overlap (52-194:225-367)
30 40 50 60 70 80
pF1KB9 NKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKK
.:::.:.:: :.::::: :.:::.::::.:
NP_001 VGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEK
200 210 220 230 240 250
90 100 110 120 130 140
pF1KB9 SHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQC
..:.::::.: :: :: :::::::::::.:.:::..:. ::.: .::::::::::: :
NP_001 PYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYAC
260 270 280 290 300 310
150 160 170 180 190 200
pF1KB9 DECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKN
.:::. ::.:: ::.::: :::::::.:.:::: ::::::: ::...: :::
NP_001 NECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECG
320 330 340 350 360 370
210 220
pF1KB9 IRVKTHLPSWKAGTGRKSVAGLR
NP_001 GKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSL
380 390 400 410 420 430
>--
initn: 287 init1: 287 opt: 287 Z-score: 209.5 bits: 46.9 E(85289): 6.3e-05
Smith-Waterman score: 287; 67.9% identity (83.9% similar) in 56 aa overlap (111-166:368-423)
90 100 110 120 130 140
pF1KB9 KSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQ
:.: ::: .: ::.:::::::::::.::.
NP_001 KPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYE
340 350 360 370 380 390
150 160 170 180 190 200
pF1KB9 CDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGK
:.:::. : :: :..::: ::::::
NP_001 CSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
400 410 420 430 440
>--
initn: 258 init1: 246 opt: 271 Z-score: 199.3 bits: 45.1 E(85289): 0.00023
Smith-Waterman score: 271; 34.6% identity (69.2% similar) in 133 aa overlap (11-135:94-224)
10 20 30
pF1KB9 MRLAKPKAGISRSSSQGKAYENKRK----TGRQRQKWGMT
.:. .. . :. :. :: .. ..
NP_001 EWKRLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQG
70 80 90 100 110 120
40 50 60 70 80 90
pF1KB9 IRFDSSFSR---LRRSLDDKP-YKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSF
..: .. : :.: : ..: . .. .:.: .. ... :..:.: : :.::
NP_001 LKFKEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTV--EEKLTPRGERSEKYNDFGNSF
130 140 150 160 170 180
100 110 120 130 140 150
pF1KB9 FQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSS
.::::.:.:. .:..:.:::::..::...:.::::::::::
NP_001 TVNSNLISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSS
190 200 210 220 230 240
160 170 180 190 200 210
pF1KB9 HLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWK
NP_001 HLIQHQRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTH
250 260 270 280 290 300
>>NP_001265216 (OMIM: 194510) zinc finger protein 3 isof (446 aa)
initn: 758 init1: 758 opt: 758 Z-score: 507.7 bits: 102.1 E(85289): 1.5e-21
Smith-Waterman score: 758; 69.2% identity (88.1% similar) in 143 aa overlap (52-194:225-367)
30 40 50 60 70 80
pF1KB9 NKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKK
.:::.:.:: :.::::: :.:::.::::.:
NP_001 VGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEK
200 210 220 230 240 250
90 100 110 120 130 140
pF1KB9 SHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQC
..:.::::.: :: :: :::::::::::.:.:::..:. ::.: .::::::::::: :
NP_001 PYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYAC
260 270 280 290 300 310
150 160 170 180 190 200
pF1KB9 DECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKN
.:::. ::.:: ::.::: :::::::.:.:::: ::::::: ::...: :::
NP_001 NECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECG
320 330 340 350 360 370
210 220
pF1KB9 IRVKTHLPSWKAGTGRKSVAGLR
NP_001 GKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSL
380 390 400 410 420 430
>--
initn: 287 init1: 287 opt: 287 Z-score: 209.5 bits: 46.9 E(85289): 6.3e-05
Smith-Waterman score: 287; 67.9% identity (83.9% similar) in 56 aa overlap (111-166:368-423)
90 100 110 120 130 140
pF1KB9 KSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQ
:.: ::: .: ::.:::::::::::.::.
NP_001 KPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYE
340 350 360 370 380 390
150 160 170 180 190 200
pF1KB9 CDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGK
:.:::. : :: :..::: ::::::
NP_001 CSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
400 410 420 430 440
>--
initn: 258 init1: 246 opt: 271 Z-score: 199.3 bits: 45.1 E(85289): 0.00023
Smith-Waterman score: 271; 34.6% identity (69.2% similar) in 133 aa overlap (11-135:94-224)
10 20 30
pF1KB9 MRLAKPKAGISRSSSQGKAYENKRK----TGRQRQKWGMT
.:. .. . :. :. :: .. ..
NP_001 EWKRLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQG
70 80 90 100 110 120
40 50 60 70 80 90
pF1KB9 IRFDSSFSR---LRRSLDDKP-YKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSF
..: .. : :.: : ..: . .. .:.: .. ... :..:.: : :.::
NP_001 LKFKEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTV--EEKLTPRGERSEKYNDFGNSF
130 140 150 160 170 180
100 110 120 130 140 150
pF1KB9 FQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSS
.::::.:.:. .:..:.:::::..::...:.::::::::::
NP_001 TVNSNLISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSS
190 200 210 220 230 240
160 170 180 190 200 210
pF1KB9 HLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWK
NP_001 HLIQHQRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTH
250 260 270 280 290 300
>>NP_001265213 (OMIM: 194510) zinc finger protein 3 isof (446 aa)
initn: 758 init1: 758 opt: 758 Z-score: 507.7 bits: 102.1 E(85289): 1.5e-21
Smith-Waterman score: 758; 69.2% identity (88.1% similar) in 143 aa overlap (52-194:225-367)
30 40 50 60 70 80
pF1KB9 NKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKK
.:::.:.:: :.::::: :.:::.::::.:
NP_001 VGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEK
200 210 220 230 240 250
90 100 110 120 130 140
pF1KB9 SHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQC
..:.::::.: :: :: :::::::::::.:.:::..:. ::.: .::::::::::: :
NP_001 PYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYAC
260 270 280 290 300 310
150 160 170 180 190 200
pF1KB9 DECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKN
.:::. ::.:: ::.::: :::::::.:.:::: ::::::: ::...: :::
NP_001 NECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECG
320 330 340 350 360 370
210 220
pF1KB9 IRVKTHLPSWKAGTGRKSVAGLR
NP_001 GKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSL
380 390 400 410 420 430
>--
initn: 287 init1: 287 opt: 287 Z-score: 209.5 bits: 46.9 E(85289): 6.3e-05
Smith-Waterman score: 287; 67.9% identity (83.9% similar) in 56 aa overlap (111-166:368-423)
90 100 110 120 130 140
pF1KB9 KSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQ
:.: ::: .: ::.:::::::::::.::.
NP_001 KPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHTGENPYE
340 350 360 370 380 390
150 160 170 180 190 200
pF1KB9 CDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGK
:.:::. : :: :..::: ::::::
NP_001 CSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
400 410 420 430 440
>--
initn: 258 init1: 246 opt: 271 Z-score: 199.3 bits: 45.1 E(85289): 0.00023
Smith-Waterman score: 271; 34.6% identity (69.2% similar) in 133 aa overlap (11-135:94-224)
10 20 30
pF1KB9 MRLAKPKAGISRSSSQGKAYENKRK----TGRQRQKWGMT
.:. .. . :. :. :: .. ..
NP_001 EWKRLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQG
70 80 90 100 110 120
40 50 60 70 80 90
pF1KB9 IRFDSSFSR---LRRSLDDKP-YKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSF
..: .. : :.: : ..: . .. .:.: .. ... :..:.: : :.::
NP_001 LKFKEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTV--EEKLTPRGERSEKYNDFGNSF
130 140 150 160 170 180
100 110 120 130 140 150
pF1KB9 FQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSS
.::::.:.:. .:..:.:::::..::...:.::::::::::
NP_001 TVNSNLISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSS
190 200 210 220 230 240
160 170 180 190 200 210
pF1KB9 HLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWK
NP_001 HLIQHQRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTH
250 260 270 280 290 300
224 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:03:12 2016 done: Fri Nov 4 18:03:13 2016
Total Scan time: 4.620 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]