Result of FASTA (ccds) for
pF1KB9658
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9658, 323 aa
1>>>pF1KB9658 323 - 323 aa - 323 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.5883+/-0.000826; mu= 4.4660+/- 0.050
mean_var=230.2377+/-47.550, 0's: 0 Z-trim(116.5): 26 B-trim: 97 in 1/50
Lambda= 0.084525
statistics sampled from 17071 (17094) to 17071 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.818), E-opt: 0.2 (0.525), width: 16
Scan time: 3.200
The best scores are: opt bits E(32554)
CCDS13311.1 MAFB gene_id:9935|Hs108|chr20 ( 323) 2239 284.9 6e-77
CCDS42198.1 MAF gene_id:4094|Hs108|chr16 ( 373) 707 98.1 1.1e-20
CCDS10928.1 MAF gene_id:4094|Hs108|chr16 ( 403) 706 98.0 1.3e-20
CCDS34955.1 MAFA gene_id:389692|Hs108|chr8 ( 353) 581 82.7 4.7e-16
CCDS9608.1 NRL gene_id:4901|Hs108|chr14 ( 237) 439 65.2 5.7e-11
>>CCDS13311.1 MAFB gene_id:9935|Hs108|chr20 (323 aa)
initn: 2239 init1: 2239 opt: 2239 Z-score: 1495.0 bits: 284.9 E(32554): 6e-77
Smith-Waterman score: 2239; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323)
10 20 30 40 50 60
pF1KB9 MAAELSMGPELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MAAELSMGPELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTPL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 STPCSSVPSSPSFSPTEQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALIGSHPVPQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 STPCSSVPSSPSFSPTEQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALIGSHPVPQP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LQSFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LQSFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 QQLPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QQLPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 QKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEK
250 260 270 280 290 300
310 320
pF1KB9 LANSGFREAGSTSDSPSSPEFFL
:::::::::::::::::::::::
CCDS13 LANSGFREAGSTSDSPSSPEFFL
310 320
>>CCDS42198.1 MAF gene_id:4094|Hs108|chr16 (373 aa)
initn: 1072 init1: 642 opt: 707 Z-score: 484.5 bits: 98.1 E(32554): 1.1e-20
Smith-Waterman score: 1060; 52.6% identity (70.2% similar) in 359 aa overlap (18-323:19-373)
10 20 30 40 50
pF1KB9 MAAELSMGPELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTP
:::::::::.::.:::::. ...: : :: .::.::::
CCDS42 MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPV-ETDRIISQCGRLIAGGSLSSTP
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 LSTPCSSVPSSPSFS-PT-----EQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALIG
.:::::::: ::::: :. :::.:::: :::.. ::.:::::...:::::::::.
CCDS42 MSTPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALIS
60 70 80 90 100 110
120 130 140 150
pF1KB9 -SHPVPQPLQSFDSF-RGAHHHHHHHHPHPHHAYPGAG-----------------VAHDE
:: : .::.. :::.. . :.: .:..
CCDS42 NSH---QLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSG
120 130 140 150 160 170
160 170 180 190 200
pF1KB9 LGPHAHPHHHH-----HHQASPPPSSAASPAQQLP-TSHPGPGPHATASATAAGGNGS--
::: : :::: :: .. :..:.: : . .. : : :.:.. ..::.:.
CCDS42 AGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGG
180 190 200 210 220 230
210 220 230 240
pF1KB9 --------------------VEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTL
.:::::.:::.::::::::.::: .:.::::::::::::
CCDS42 GGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTL
240 250 260 270 280 290
250 260 270 280 290 300
pF1KB9 KNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLANSGF
::::::::::.:::::.: ::.::.::.:::..::::.:::.::::::: : :::..:::
CCDS42 KNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGF
300 310 320 330 340 350
310 320
pF1KB9 REAGSTSDSPSSPEFFL
:: ::.::.:::::::.
CCDS42 RENGSSSDNPSSPEFFM
360 370
>>CCDS10928.1 MAF gene_id:4094|Hs108|chr16 (403 aa)
initn: 1071 init1: 641 opt: 706 Z-score: 483.4 bits: 98.0 E(32554): 1.3e-20
Smith-Waterman score: 1059; 52.6% identity (70.2% similar) in 359 aa overlap (18-323:19-373)
10 20 30 40 50
pF1KB9 MAAELSMGPELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTP
:::::::::.::.:::::. ...: : :: .::.::::
CCDS10 MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPV-ETDRIISQCGRLIAGGSLSSTP
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 LSTPCSSVPSSPSFS-PT-----EQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALIG
.:::::::: ::::: :. :::.:::: :::.. ::.:::::...:::::::::.
CCDS10 MSTPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALIS
60 70 80 90 100 110
120 130 140 150
pF1KB9 -SHPVPQPLQSFDSF-RGAHHHHHHHHPHPHHAYPGAG-----------------VAHDE
:: : .::.. :::.. . :.: .:..
CCDS10 NSH---QLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSG
120 130 140 150 160 170
160 170 180 190 200
pF1KB9 LGPHAHPHHHH-----HHQASPPPSSAASPAQQLP-TSHPGPGPHATASATAAGGNGS--
::: : :::: :: .. :..:.: : . .. : : :.:.. ..::.:.
CCDS10 AGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGG
180 190 200 210 220 230
210 220 230 240
pF1KB9 --------------------VEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTL
.:::::.:::.::::::::.::: .:.::::::::::::
CCDS10 GGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTL
240 250 260 270 280 290
250 260 270 280 290 300
pF1KB9 KNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLANSGF
::::::::::.:::::.: ::.::.::.:::..::::.:::.::::::: : :::..:::
CCDS10 KNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGF
300 310 320 330 340 350
310 320
pF1KB9 REAGSTSDSPSSPEFFL
:: ::.::.:::::::.
CCDS10 RENGSSSDNPSSPEFFITEPTRKLEPSVGYATFWKPQHRVLTSVFTK
360 370 380 390 400
>>CCDS34955.1 MAFA gene_id:389692|Hs108|chr8 (353 aa)
initn: 931 init1: 510 opt: 581 Z-score: 401.8 bits: 82.7 E(32554): 4.7e-16
Smith-Waterman score: 995; 53.4% identity (64.0% similar) in 367 aa overlap (1-319:1-335)
10 20 30 40 50 60
pF1KB9 MAAELSMGPELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTPL
:::::.:: :::.::::.::::::::.::.::::: .::: : :: : ::.:::::
CCDS34 MAAELAMGAELPSSPLAIEYVNDFDLMKFEVKKEP-PEAER---FCHRLPP-GSLSSTPL
10 20 30 40 50
70 80
pF1KB9 STPCSSVPSSPSF---SP---------------------------------TEQKTHLED
::::::::::::: :: : : :::
CCDS34 STPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALED
60 70 80 90 100 110
90 100 110 120 130 140
pF1KB9 LYWMASNYQQMNPEALNLTPEDAVEALIGSHPVPQPLQSFDSFRGAHHHHHH--HHPHPH
::::.. ...::::::::::::::::::: .:: :: :::
CCDS34 LYWMSGYQHHLNPEALNLTPEDAVEALIGS---------------GHHGAHHGAHHPAAA
120 130 140 150 160
150 160 170 180 190
pF1KB9 HAY-----PG--AGVAHDELGP-HAHPHHH--HHHQASPPPSSAASPAQQLPTSHPGPGP
:: :: .: . :..: : : :: :::.: : .. : : :
CCDS34 AAYEAFRGPGFAGGGGADDMGAGHHHGAHHAAHHHHA-------AHHHHHHHHHHGGAG-
170 180 190 200 210
200 210 220 230 240 250
pF1KB9 HATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYA
:. .:: . .:.:::::::::::::::::.::::.:.::::::::::::::::::
CCDS34 HGG----GAGHHVRLEERFSDDQLVSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYA
220 230 240 250 260
260 270 280 290 300 310
pF1KB9 QSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLANSGFREAGST
::::.:::::.: ::.:: :: .:::::: ::.:::.::: :: : ::::. : ...
CCDS34 QSCRFKRVQQRHILESEKCQLQSQVEQLKLEVGRLAKERDLYKEKYEKLAGRGGPGSAGG
270 280 290 300 310 320
320
pF1KB9 SDSPSSPEFFL
. : :
CCDS34 AGFPREPSPPQAGPGGAKGTADFFL
330 340 350
>>CCDS9608.1 NRL gene_id:4901|Hs108|chr14 (237 aa)
initn: 782 init1: 423 opt: 439 Z-score: 310.4 bits: 65.2 E(32554): 5.7e-11
Smith-Waterman score: 634; 43.9% identity (59.1% similar) in 303 aa overlap (11-305:3-226)
10 20 30 40 50 60
pF1KB9 MAAELSMGPELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTPL
:: :::::::::::::.::.::.:: ::: : . : ::
CCDS96 MALPPSPLAMEYVNDFDLMKFEVKREP--SEGRPGPPTASL---GS------
10 20 30 40
70 80 90 100 110
pF1KB9 STPCSSVPSSPSFS-P-----TE-QKTHLEDLYWMASNYQQMNP-EALNLTPEDAVEALI
:: :::: ::.:: : :: . ::.:::.:. ::.. :::.:.::.:.: :
CCDS96 -TPYSSVPPSPTFSEPGMVGATEGTRPGLEELYWLATLQQQLGAGEALGLSPEEAMELLQ
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB9 GSHPVPQPLQSFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPP
:. ::: :. :: :::. :
CCDS96 GQGPVP-----VDG--------------PHGYYPGS-----------------------P
110
180 190 200 210 220 230
pF1KB9 PSSAASPAQQLPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFT
..:. .: . .:::: :::::::::::.:::
CCDS96 EETGAQHVQ-------------------------LAERFSDAALVSMSVRELNRQLRGCG
120 130 140 150
240 250 260 270 280 290
pF1KB9 KDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERD
.::..::::.:::::::::::.:: ::.::.. :: :...: :.. :. ::.:::::::
CCDS96 RDEALRLKQRRRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQLDALRAEVARLARERD
160 170 180 190 200 210
300 310 320
pF1KB9 AYKVKCEKLANSGFREAGSTSDSPSSPEFFL
::..:..:..::
CCDS96 LYKARCDRLTSSGPGSGDPSHLFL
220 230
323 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:00:22 2016 done: Fri Nov 4 18:00:23 2016
Total Scan time: 3.200 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]