FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9656, 159 aa
  1>>>pF1KB9656 159 - 159 aa - 159 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.4354+/-0.000629; mu= 4.3912+/- 0.038
 mean_var=140.7842+/-27.823, 0's: 0 Z-trim(117.1): 9  B-trim: 6 in 1/52
 Lambda= 0.108093
 statistics sampled from 17819 (17827) to 17819 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.857), E-opt: 0.2 (0.548), width:  16
 Scan time:  2.240

The best scores are:                                      opt bits E(32554)
CCDS35358.1 TCEAL1 gene_id:9338|Hs108|chrX         ( 159) 1092 180.1 5.2e-46


>>CCDS35358.1 TCEAL1 gene_id:9338|Hs108|chrX              (159 aa)
 initn: 1092 init1: 1092 opt: 1092  Z-score: 939.6  bits: 180.1 E(32554): 5.2e-46
Smith-Waterman score: 1092; 100.0% identity (100.0% similar) in 159 aa overlap (1-159:1-159)

               10        20        30        40        50        60
pF1KB9 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 MLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MLLSEERPPQEGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGR
               70        80        90       100       110       120

              130       140       150         
pF1KB9 NLSNEEMIQAADELEEMKRVRNKLMIMHWKAKRSRPYPI
       :::::::::::::::::::::::::::::::::::::::
CCDS35 NLSNEEMIQAADELEEMKRVRNKLMIMHWKAKRSRPYPI
              130       140       150         




159 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 17:59:47 2016 done: Fri Nov  4 17:59:47 2016
 Total Scan time:  2.240 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]