Result of FASTA (ccds) for
pF1KB9640
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9640, 361 aa
1>>>pF1KB9640 361 - 361 aa - 361 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.2674+/-0.000799; mu= 9.1527+/- 0.049
mean_var=167.0474+/-35.713, 0's: 0 Z-trim(113.3): 45 B-trim: 611 in 1/50
Lambda= 0.099233
statistics sampled from 13898 (13940) to 13898 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.428), width: 16
Scan time: 3.180
The best scores are: opt bits E(32554)
CCDS14450.1 POU3F4 gene_id:5456|Hs108|chrX ( 361) 2475 365.9 2.9e-101
CCDS5040.1 POU3F2 gene_id:5454|Hs108|chr6 ( 443) 1078 166.0 5.5e-41
CCDS33265.1 POU3F3 gene_id:5455|Hs108|chr2 ( 500) 1069 164.8 1.5e-40
CCDS30679.1 POU3F1 gene_id:5453|Hs108|chr1 ( 451) 983 152.4 6.9e-37
CCDS55656.1 POU2F1 gene_id:5451|Hs108|chr1 ( 755) 692 111.0 3.5e-24
CCDS1259.2 POU2F1 gene_id:5451|Hs108|chr1 ( 766) 692 111.0 3.5e-24
CCDS55655.1 POU2F1 gene_id:5451|Hs108|chr1 ( 703) 686 110.1 6e-24
CCDS8431.1 POU2F3 gene_id:25833|Hs108|chr11 ( 436) 666 107.0 3.1e-23
CCDS58190.1 POU2F3 gene_id:25833|Hs108|chr11 ( 438) 666 107.0 3.1e-23
CCDS34391.1 POU5F1 gene_id:5460|Hs108|chr6 ( 360) 638 102.9 4.3e-22
CCDS55274.1 POU5F1B gene_id:5462|Hs108|chr8 ( 359) 629 101.7 1.1e-21
CCDS2919.1 POU1F1 gene_id:5449|Hs108|chr3 ( 291) 609 98.7 6.6e-21
CCDS46873.1 POU1F1 gene_id:5449|Hs108|chr3 ( 317) 609 98.7 7e-21
CCDS34074.1 POU4F2 gene_id:5458|Hs108|chr4 ( 409) 518 85.8 7e-17
CCDS31996.1 POU4F1 gene_id:5457|Hs108|chr13 ( 419) 518 85.8 7.2e-17
CCDS47398.2 POU5F1 gene_id:5460|Hs108|chr6 ( 190) 498 82.6 2.9e-16
CCDS4281.1 POU4F3 gene_id:5459|Hs108|chr5 ( 338) 496 82.6 5.4e-16
CCDS59489.1 POU5F2 gene_id:134187|Hs108|chr5 ( 328) 490 81.7 9.7e-16
CCDS31803.1 POU6F1 gene_id:5463|Hs108|chr12 ( 301) 470 78.8 6.6e-15
CCDS81691.1 POU6F1 gene_id:5463|Hs108|chr12 ( 611) 470 79.1 1.1e-14
CCDS55103.1 POU6F2 gene_id:11281|Hs108|chr7 ( 655) 428 73.1 7.5e-13
CCDS56094.1 POU2F2 gene_id:5452|Hs108|chr19 ( 467) 421 72.0 1.2e-12
CCDS56095.1 POU2F2 gene_id:5452|Hs108|chr19 ( 479) 421 72.0 1.2e-12
CCDS58665.1 POU2F2 gene_id:5452|Hs108|chr19 ( 400) 412 70.6 2.6e-12
CCDS33035.1 POU2F2 gene_id:5452|Hs108|chr19 ( 463) 412 70.7 2.8e-12
>>CCDS14450.1 POU3F4 gene_id:5456|Hs108|chrX (361 aa)
initn: 2475 init1: 2475 opt: 2475 Z-score: 1931.4 bits: 365.9 E(32554): 2.9e-101
Smith-Waterman score: 2475; 100.0% identity (100.0% similar) in 361 aa overlap (1-361:1-361)
10 20 30 40 50 60
pF1KB9 MATAASNPYSILSSTSLVHADSAGMQQGSPFRNPQKLLQSDYLQGVPSNGHPLGHHWVTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MATAASNPYSILSSTSLVHADSAGMQQGSPFRNPQKLLQSDYLQGVPSNGHPLGHHWVTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LSDGGPWSSTLATSPLDQQDVKPGREDLQLGAIIHHRSPHVAHHSPHTNHPNAWGASPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LSDGGPWSSTLATSPLDQQDVKPGREDLQLGAIIHHRSPHVAHHSPHTNHPNAWGASPAP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 NPSITSSGQPLNVYSQPGFTVSGMLEHGGLTPPPAAASAQSLHPVLREPPDHGELGSHHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NPSITSSGQPLNVYSQPGFTVSGMLEHGGLTPPPAAASAQSLHPVLREPPDHGELGSHHC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 QDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 SFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGDQQPHEVYSHTVKTDTSCHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 PKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGDQQPHEVYSHTVKTDTSCHD
310 320 330 340 350 360
pF1KB9 L
:
CCDS14 L
>>CCDS5040.1 POU3F2 gene_id:5454|Hs108|chr6 (443 aa)
initn: 1291 init1: 1024 opt: 1078 Z-score: 849.3 bits: 166.0 E(32554): 5.5e-41
Smith-Waterman score: 1193; 56.3% identity (66.3% similar) in 398 aa overlap (48-359:50-435)
20 30 40 50 60
pF1KB9 VHADSAGMQQGSPFRNPQKLLQSDYLQGVPSNGHPLGH--HWVTSLS-------------
::::::.: .:.:.::
CCDS50 HAEPPGGMQQGAGGYREAQSLVQGDYGALQSNGHPLSHAHQWITALSHGGGGGGGGGGGG
20 30 40 50 60 70
70 80 90
pF1KB9 ---------DGGPWSSTLATSPLDQQDVKP-------GREDLQL---GAIIHH-------
::.::: :::: : :.:: :: : .: ::. ..
CCDS50 GGGGGGGGGDGSPWS----TSPLGQPDIKPSVVVQQGGRGD-ELHGPGALQQQHQQQQQQ
80 90 100 110 120 130
100 110 120 130
pF1KB9 ---------------RSPHVAHHSP-HTNHPNAWGASPAPN---PSITSSGQPLNVYSQP
: ::..::. : :.:: .. : ::. .:. : .::::
CCDS50 QQQQQQQQQQQQQQQRPPHLVHHAANHHPGPGAWRSAAAAAHLPPSMGASNGGL-LYSQP
140 150 160 170 180 190
140 150 160 170
pF1KB9 GFTVSGMLEHGGLTPPPAAASAQSL------------------HPVLREPPDH------G
.:::.::: :: ::. ..: :: . :: :
CCDS50 SFTVNGMLGAGG---QPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQQPPPPPPPQGPPG
200 210 220 230 240 250
180 190 200 210 220 230
pF1KB9 ELGSHHCQDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTIC
. :.:: . ::::.:::::.::::::::::::::::::::::::::::::::::::::::
CCDS50 HPGAHH-DPHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTIC
260 270 280 290 300
240 250 260 270 280 290
pF1KB9 RFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVL
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::.:
CCDS50 RFEALQLSFKNMCKLKPLLNKWLEEADSSSGSPTSIDKIAAQGRKRKKRTSIEVSVKGAL
310 320 330 340 350 360
300 310 320 330 340 350
pF1KB9 ETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGDQQP--HEVYSHT
:.::::::::.::::.::::::::::::::::::::::::::::::: : ..::. .
CCDS50 ESHFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGGTLPGAEDVYGGS
370 380 390 400 410 420
360
pF1KB9 VKTDTSCHDL
:: :
CCDS50 --RDTPPHHGVQTPVQ
430 440
>>CCDS33265.1 POU3F3 gene_id:5455|Hs108|chr2 (500 aa)
initn: 1239 init1: 1021 opt: 1069 Z-score: 841.7 bits: 164.8 E(32554): 1.5e-40
Smith-Waterman score: 1182; 60.1% identity (70.6% similar) in 361 aa overlap (64-356:131-488)
40 50 60 70 80 90
pF1KB9 PQKLLQSDYLQGVPSNGHPLGHHWVTSLSDGGPWSSTLATSPLDQ-QDVK--PGREDLQL
:.: . : : ::: ::.::.
CCDS33 LPHAAAAAAAAAAAAVEASSPWSGSAVGMAGSPQQPPQPPPPPPQGPDVKGGAGRDDLHA
110 120 130 140 150 160
100 110 120 130
pF1KB9 GAIIHHRSP-HVAHHSP--HTNHPNAWGASPAPN------------PSITSSGQPLN---
:. .:::.: :.. : : .::..:::. : ::.... ::
CCDS33 GTALHHRGPPHLGPPPPPPHQGHPGGWGAAAAAAAAAAAAAAAAHLPSMAGGQQPPPQSL
170 180 190 200 210 220
140 150 160
pF1KB9 VYSQPG-FTVSGMLEHGGLTPPP------AAASAQSL-HPVL------------------
.::::: :::.::: . : : :...:::: :: :
CCDS33 LYSQPGGFTVNGML---SAPPGPGGGGGGAGGGAQSLVHPGLVRGDTPELAEHHHHHHHH
230 240 250 260 270
170 180 190 200
pF1KB9 -----------REPPDHGELGSH-----HCQD-HSDEETPTSDELEQFAKQFKQRRIKLG
. :: :: :. . .: ::::.:::::.::::::::::::::::
CCDS33 AHPHPPHPHHAQGPPHHGGGGGGAGPGLNSHDPHSDEDTPTSDDLEQFAKQFKQRRIKLG
280 290 300 310 320 330
210 220 230 240 250 260
pF1KB9 FTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPTSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPTSI
340 350 360 370 380 390
270 280 290 300 310 320
pF1KB9 DKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNR
::::::::::::::::::::::.::.::::::::.::::..:::::::::::::::::::
CCDS33 DKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNR
400 410 420 430 440 450
330 340 350 360
pF1KB9 RQKEKRMTPPGDQQ--PHEVYSH--TVKTDTSCHDL
::::::::::: :: : .:::. ::..::
CCDS33 RQKEKRMTPPGIQQQTPDDVYSQVGTVSADTPPPHHGLQTSVQ
460 470 480 490 500
>>CCDS30679.1 POU3F1 gene_id:5453|Hs108|chr1 (451 aa)
initn: 1035 init1: 963 opt: 983 Z-score: 775.7 bits: 152.4 E(32554): 6.9e-37
Smith-Waterman score: 1064; 51.6% identity (68.4% similar) in 376 aa overlap (25-349:40-413)
10 20 30 40 50
pF1KB9 MATAASNPYSILSSTSLVHADSAGMQQGSPFRNPQKLLQSDYLQGVPSNGHPLG
.. :. .:. :::.. ..: :. . :::.:
CCDS30 RGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWL-GA-GAGHPVG
10 20 30 40 50 60
60 70 80 90 100
pF1KB9 --H-HWV-TSLSDGGPWSSTLATSPLDQQDVKPGREDLQLGA------IIHHRSPHV--A
: .:. :. . :: :.. :: : :. ..:. . :. :
CCDS30 LAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAA
70 80 90 100 110 120
110 120 130 140 150
pF1KB9 HHSPHTNHPNAWGASPAPNPSITSSGQPLNVYSQPGFT------VSGMLEHGGLTPPPAA
. : : . . ::.:. : . :::..:.: .. ..::: :: :.
CCDS30 WAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGL
130 140 150 160 170 180
160 170 180
pF1KB9 ASA--QSLHPVLREPPDHGELGSH-HCQ---------------------------DHSDE
: .. : . :: .::.: : . .::::
CCDS30 HHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDE
190 200 210 220 230 240
190 200 210 220 230 240
pF1KB9 ETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMC
..:.::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 DAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMC
250 260 270 280 290 300
250 260 270 280 290 300
pF1KB9 KLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ
::::::::::::.:::.::::..::::::::::::::::::.:::.::.::::::::.:.
CCDS30 KLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAH
310 320 330 340 350 360
310 320 330 340 350 360
pF1KB9 EISSLADSLQLEKEVVRVWFCNRRQKEKRMTPP-GDQQP--HEVYSHTVKTDTSCHDL
::..:::::::::::::::::::::::::::: : .: .::.
CCDS30 EITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPGGGGASPP
370 380 390 400 410 420
CCDS30 SAPPPPPPAALHHHHHHTLPGSVQ
430 440 450
>>CCDS55656.1 POU2F1 gene_id:5451|Hs108|chr1 (755 aa)
initn: 682 init1: 383 opt: 692 Z-score: 547.7 bits: 111.0 E(32554): 3.5e-24
Smith-Waterman score: 698; 42.6% identity (66.4% similar) in 324 aa overlap (35-339:132-452)
10 20 30 40 50 60
pF1KB9 ASNPYSILSSTSLVHADSAGMQQGSPFRNPQKLLQSDYLQGVPSNGHPLGHHWVTSLSDG
: :::. :. . : . : .
CCDS55 QPSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAA
110 120 130 140 150 160
70 80 90 100 110
pF1KB9 GPWSSTLATSPLDQQDV-KPGR--EDLQLGAIIHHRSPHVAHH---SPHTN-HPNAWGAS
: :. :..:. : . .: . .::: ..... .. . : :: .: . :
CCDS55 GATISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIIS
170 180 190 200 210 220
120 130 140 150 160 170
pF1KB9 PAPNPSITSSGQPLNVYSQ-PGFTVSGMLEHGG---LTPPPAAASAQ-SLHPVLREPPDH
.:. . . : :. .: : . ...:. :: ::. . . :. : ..
CCDS55 QTPQGQ-QGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQ
230 240 250 260 270 280
180 190 200 210 220 230
pF1KB9 GELGSHHCQDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTI
. .. . : :: .::::::: ::::::::::::.:::::.: :::: ::::::
CCDS55 ST--PKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTI
290 300 310 320 330
240 250 260 270 280
pF1KB9 CRFEALQLSFKNMCKLKPLLNKWLEEA-----DSSTGSPTSIDKIAAQG--RKRKKRTSI
:::::.:::::::::::::.:::..: ::: .::..... . .: :.:::::::
CCDS55 SRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSI
340 350 360 370 380 390
290 300 310 320 330 340
pF1KB9 EVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGDQQPH
:.... .:: ::. ::...::. .::.:..::::.:::::::::::::..::
CCDS55 ETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTS
400 410 420 430 440 450
350 360
pF1KB9 EVYSHTVKTDTSCHDL
CCDS55 SSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTA
460 470 480 490 500 510
>>CCDS1259.2 POU2F1 gene_id:5451|Hs108|chr1 (766 aa)
initn: 682 init1: 383 opt: 692 Z-score: 547.6 bits: 111.0 E(32554): 3.5e-24
Smith-Waterman score: 698; 42.6% identity (66.4% similar) in 324 aa overlap (35-339:143-463)
10 20 30 40 50 60
pF1KB9 ASNPYSILSSTSLVHADSAGMQQGSPFRNPQKLLQSDYLQGVPSNGHPLGHHWVTSLSDG
: :::. :. . : . : .
CCDS12 QPSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAA
120 130 140 150 160 170
70 80 90 100 110
pF1KB9 GPWSSTLATSPLDQQDV-KPGR--EDLQLGAIIHHRSPHVAHH---SPHTN-HPNAWGAS
: :. :..:. : . .: . .::: ..... .. . : :: .: . :
CCDS12 GATISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIIS
180 190 200 210 220 230
120 130 140 150 160 170
pF1KB9 PAPNPSITSSGQPLNVYSQ-PGFTVSGMLEHGG---LTPPPAAASAQ-SLHPVLREPPDH
.:. . . : :. .: : . ...:. :: ::. . . :. : ..
CCDS12 QTPQGQ-QGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQ
240 250 260 270 280 290
180 190 200 210 220 230
pF1KB9 GELGSHHCQDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTI
. .. . : :: .::::::: ::::::::::::.:::::.: :::: ::::::
CCDS12 ST--PKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTI
300 310 320 330 340
240 250 260 270 280
pF1KB9 CRFEALQLSFKNMCKLKPLLNKWLEEA-----DSSTGSPTSIDKIAAQG--RKRKKRTSI
:::::.:::::::::::::.:::..: ::: .::..... . .: :.:::::::
CCDS12 SRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSI
350 360 370 380 390 400
290 300 310 320 330 340
pF1KB9 EVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGDQQPH
:.... .:: ::. ::...::. .::.:..::::.:::::::::::::..::
CCDS12 ETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTS
410 420 430 440 450 460
350 360
pF1KB9 EVYSHTVKTDTSCHDL
CCDS12 SSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTA
470 480 490 500 510 520
>>CCDS55655.1 POU2F1 gene_id:5451|Hs108|chr1 (703 aa)
initn: 682 init1: 383 opt: 686 Z-score: 543.4 bits: 110.1 E(32554): 6e-24
Smith-Waterman score: 686; 45.9% identity (69.0% similar) in 281 aa overlap (73-339:133-400)
50 60 70 80 90 100
pF1KB9 LQGVPSNGHPLGHHWVTSLSDGGPWSSTLATSPLDQ-QDVKPGREDLQLGAIIHHRSPHV
:. :.: :... .:: ...:
CCDS55 DSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGDLQQLQQLQQQNLNLQQFVLVH------
110 120 130 140 150
110 120 130 140 150
pF1KB9 AHHSPHTN-HPNAWGASPAPNPSITSSGQPLNVYSQ-PGFTVSGMLEHGG---LTPPPAA
: :: .: . : .:. . . : :. .: : . ...:. :: ::.
CCDS55 ----PTTNLQPAQFIISQTPQGQ-QGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPAT
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB9 ASAQ-SLHPVLREPPDHGELGSHHCQDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADV
. . :. : ... .. . : :: .::::::: ::::::::::::.::
CCDS55 PTRTIAATPIQTLPQSQST--PKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDV
220 230 240 250 260
220 230 240 250 260 270
pF1KB9 GLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEA-----DSSTGSPTSID
:::.: :::: :::::: :::::.:::::::::::::.:::..: ::: .::....
CCDS55 GLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALN
270 280 290 300 310 320
280 290 300 310 320
pF1KB9 KIAAQG--RKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCN
. . .: :.::::::::.... .:: ::. ::...::. .::.:..::::.::::::
CCDS55 SPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCN
330 340 350 360 370 380
330 340 350 360
pF1KB9 RRQKEKRMTPPGDQQPHEVYSHTVKTDTSCHDL
:::::::..::
CCDS55 RRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAV
390 400 410 420 430 440
>>CCDS8431.1 POU2F3 gene_id:25833|Hs108|chr11 (436 aa)
initn: 659 init1: 390 opt: 666 Z-score: 530.7 bits: 107.0 E(32554): 3.1e-23
Smith-Waterman score: 698; 41.9% identity (66.6% similar) in 332 aa overlap (15-339:25-342)
10 20 30 40
pF1KB9 MATAASNPYSILSSTSLVHADSAGMQQGSPFRNPQKLLQ-SDYLQGVPSN
..: ... .. ..: : : . :: :: . :.
CCDS84 MVNLESMHTDIKMSGDVADSTDARSTLSQVEPGNDRNGLDFNRQIKTEDLSDSLQQTLSH
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 GHPLGHHWVTSLSDGGPWSSTLATSPLDQQDVKPGREDLQLGAIIHHRSPHVAHHSPHTN
.: .. .:. :. :. :. ...: :: ... . :.. .
CCDS84 -RPCHLSQGPAMMSGNQMSGLNASPCQDMASLHP----LQQLVLVPGHLQSVSQFLLSQT
70 80 90 100 110
110 120 130 140 150 160
pF1KB9 HPNAWGASPAPNPSITSSGQPLNVYSQPGFTVSGMLEHGGLTPPPAAASAQSLHPVLREP
.:. : .: : ... : . ::.. : . : :: :.. ::.: : :
CCDS84 QPGQQGLQPNLLPFPQQQSGLLLPQTGPGLA-SQAFGHPGL---PGS----SLEPHL-EA
120 130 140 150 160
170 180 190 200 210 220
pF1KB9 PDHGELGSHHCQDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQ
.: . .: .. . .: .:::.::: ::::::::::::.:::::.: :::: :::
CCDS84 SQHLPVPKHLPSSGGADEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQ
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB9 TTICRFEALQLSFKNMCKLKPLLNKWLEEADSS-----TGSPTSIDKIAAQ-GRKRKKRT
::: :::::.:::::::::::::.:::..:.:: ...:.: ... ::::::::
CCDS84 TTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPSDPSVSTPSSYPSLSEVFGRKRKKRT
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB9 SIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGDQQ
:::.... .:: .: :::...::: .:..:..::::::::::::::::::.. :
CCDS84 SIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRINCPVATP
290 300 310 320 330 340
350 360
pF1KB9 PHEVYSHTVKTDTSCHDL
CCDS84 IKPPVYNSRLVSPSGSLGPLSVPPVHSTMPGTVTSSCSPGNNSRPSSPGSGLHASSPTAS
350 360 370 380 390 400
>>CCDS58190.1 POU2F3 gene_id:25833|Hs108|chr11 (438 aa)
initn: 659 init1: 390 opt: 666 Z-score: 530.6 bits: 107.0 E(32554): 3.1e-23
Smith-Waterman score: 698; 41.9% identity (66.6% similar) in 332 aa overlap (15-339:27-344)
10 20 30 40
pF1KB9 MATAASNPYSILSSTSLVHADSAGMQQGSPFRNPQKLLQ-SDYLQGVP
..: ... .. ..: : : . :: :: .
CCDS58 MESPRTAKGGRDIKMSGDVADSTDARSTLSQVEPGNDRNGLDFNRQIKTEDLSDSLQQTL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 SNGHPLGHHWVTSLSDGGPWSSTLATSPLDQQDVKPGREDLQLGAIIHHRSPHVAHHSPH
:. .: .. .:. :. :. :. ...: :: ... . :..
CCDS58 SH-RPCHLSQGPAMMSGNQMSGLNASPCQDMASLHP----LQQLVLVPGHLQSVSQFLLS
70 80 90 100 110
110 120 130 140 150 160
pF1KB9 TNHPNAWGASPAPNPSITSSGQPLNVYSQPGFTVSGMLEHGGLTPPPAAASAQSLHPVLR
..:. : .: : ... : . ::.. : . : :: :.. ::.: :
CCDS58 QTQPGQQGLQPNLLPFPQQQSGLLLPQTGPGLA-SQAFGHPGL---PGS----SLEPHL-
120 130 140 150 160
170 180 190 200 210 220
pF1KB9 EPPDHGELGSHHCQDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVF
: .: . .: .. . .: .:::.::: ::::::::::::.:::::.: :::: :
CCDS58 EASQHLPVPKHLPSSGGADEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDF
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB9 SQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSS-----TGSPTSIDKIAAQ-GRKRKK
::::: :::::.:::::::::::::.:::..:.:: ...:.: ... ::::::
CCDS58 SQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPSDPSVSTPSSYPSLSEVFGRKRKK
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB9 RTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGD
:::::.... .:: .: :::...::: .:..:..::::::::::::::::::.. :
CCDS58 RTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRINCPVA
290 300 310 320 330 340
350 360
pF1KB9 QQPHEVYSHTVKTDTSCHDL
CCDS58 TPIKPPVYNSRLVSPSGSLGPLSVPPVHSTMPGTVTSSCSPGNNSRPSSPGSGLHASSPT
350 360 370 380 390 400
>>CCDS34391.1 POU5F1 gene_id:5460|Hs108|chr6 (360 aa)
initn: 619 init1: 619 opt: 638 Z-score: 510.1 bits: 102.9 E(32554): 4.3e-22
Smith-Waterman score: 665; 49.8% identity (69.5% similar) in 243 aa overlap (114-343:58-295)
90 100 110 120 130 140
pF1KB9 GREDLQLGAIIHHRSPHVAHHSPHTNHPNAWGASPAPNPSITSSGQPLNVYSQPGFTVSG
:: : : : .:. .: : : :
CCDS34 GWVDPRTWLSFQGPPGGPGIGPGVGPGSEVWGIPPCPPPYEFCGGM---AYCGPQVGV-G
30 40 50 60 70 80
150 160 170 180 190
pF1KB9 MLEHGGL-TPPP---AAASAQSLHPVLREPPDHGELGSHHCQDHSDEETP--TSD-----
.. .::: : : :.....: : :. . . .. :..: ..:
CCDS34 LVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGAVKLEKEKLEQNPEESQDIKALQ
90 100 110 120 130 140
200 210 220 230 240 250
pF1KB9 -ELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPL
::::::: .::.:: ::.:::::::.::.:.:.:::::::::::::::::::::::.::
CCDS34 KELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTICRFEALQLSFKNMCKLRPL
150 160 170 180 190 200
260 270 280 290 300 310
pF1KB9 LNKWLEEADSSTG-SPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISS
:.::.::::.. . . . .:.:::: ::::: :.: ::. ::.::::. :.::
CCDS34 LQKWVEEADNNENLQEICKAETLVQARKRK-RTSIENRVRGNLENLFLQCPKPTLQQISH
210 220 230 240 250 260
320 330 340 350 360
pF1KB9 LADSLQLEKEVVRVWFCNRRQKEKRMTPPGDQQPHEVYSHTVKTDTSCHDL
.:..: :::.:::::::::::: :: . :.
CCDS34 IAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEAAGSPFSGGPVSFPLAPGPHFGT
270 280 290 300 310 320
CCDS34 PGYGSPHFTALYSSVPFPEGEAFPPVSVTTLGSPMHSN
330 340 350 360
361 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:55:07 2016 done: Fri Nov 4 17:55:07 2016
Total Scan time: 3.180 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]