Result of FASTA (ccds) for
pF1KB9637
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9637, 411 aa
1>>>pF1KB9637 411 - 411 aa - 411 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.5375+/- 0.001; mu= -14.3141+/- 0.059
mean_var=645.0388+/-163.426, 0's: 0 Z-trim(116.2): 49 B-trim: 0 in 0/53
Lambda= 0.050499
statistics sampled from 16720 (16753) to 16720 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.814), E-opt: 0.2 (0.515), width: 16
Scan time: 3.270
The best scores are: opt bits E(32554)
CCDS5203.1 PLAGL1 gene_id:5325|Hs108|chr6 ( 411) 2862 223.2 3.5e-58
CCDS5202.1 PLAGL1 gene_id:5325|Hs108|chr6 ( 463) 2862 223.3 3.8e-58
CCDS13197.1 PLAGL2 gene_id:5326|Hs108|chr20 ( 496) 1096 94.7 2.1e-19
CCDS47860.1 PLAG1 gene_id:5324|Hs108|chr8 ( 418) 1028 89.6 5.9e-18
CCDS6165.1 PLAG1 gene_id:5324|Hs108|chr8 ( 500) 1028 89.7 6.7e-18
>>CCDS5203.1 PLAGL1 gene_id:5325|Hs108|chr6 (411 aa)
initn: 2862 init1: 2862 opt: 2862 Z-score: 1158.0 bits: 223.2 E(32554): 3.5e-58
Smith-Waterman score: 2862; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
310 320 330 340 350 360
370 380 390 400 410
pF1KB9 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
370 380 390 400 410
>>CCDS5202.1 PLAGL1 gene_id:5325|Hs108|chr6 (463 aa)
initn: 2862 init1: 2862 opt: 2862 Z-score: 1157.4 bits: 223.3 E(32554): 3.8e-58
Smith-Waterman score: 2862; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:53-463)
10 20 30
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQ
::::::::::::::::::::::::::::::
CCDS52 NYSHSRERPYKCVQPDCGKAFVSRYKLMRHMATHSPQKSHQCAHCEKTFNRKDHLKNHLQ
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB9 THDPNKMAFGCEECGKKYNTMLGYKRHLALHAASSGDLTCGVCALELGSTEVLLDHLKAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 THDPNKMAFGCEECGKKYNTMLGYKRHLALHAASSGDLTCGVCALELGSTEVLLDHLKAH
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB9 AEEKPPSGTKEKKHQCDHCERCFYTRKDVRRHLVVHTGCKDFLCQFCAQRFGRKDHLTRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 AEEKPPSGTKEKKHQCDHCERCFYTRKDVRRHLVVHTGCKDFLCQFCAQRFGRKDHLTRH
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB9 TKKTHSQELMKESLQTGDLLSTFHTISPSFQLKAAALPPFPLGASAQNGLASSLPAEVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 TKKTHSQELMKESLQTGDLLSTFHTISPSFQLKAAALPPFPLGASAQNGLASSLPAEVHS
210 220 230 240 250 260
220 230 240 250 260 270
pF1KB9 LTLSPPEQAAQPMQPLPESLASLHPSVSPGSPPPPLPNHKYNTTSTSYSPLASLPLKADT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 LTLSPPEQAAQPMQPLPESLASLHPSVSPGSPPPPLPNHKYNTTSTSYSPLASLPLKADT
270 280 290 300 310 320
280 290 300 310 320 330
pF1KB9 KGFCNISLFEDLPLQEPQSPQKLNPGFDLAKGNAGKVNLPKELPADAVNLTIPASLDLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 KGFCNISLFEDLPLQEPQSPQKLNPGFDLAKGNAGKVNLPKELPADAVNLTIPASLDLSP
330 340 350 360 370 380
340 350 360 370 380 390
pF1KB9 LLGFWQLPPPATQNTFGNSTLALGPGESLPHRLSCLGQQQQEPPLAMGTVSLGQLPLPPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS52 LLGFWQLPPPATQNTFGNSTLALGPGESLPHRLSCLGQQQQEPPLAMGTVSLGQLPLPPI
390 400 410 420 430 440
400 410
pF1KB9 PHVFSAGTGSAILPHFHHAFR
:::::::::::::::::::::
CCDS52 PHVFSAGTGSAILPHFHHAFR
450 460
>>CCDS13197.1 PLAGL2 gene_id:5326|Hs108|chr20 (496 aa)
initn: 588 init1: 473 opt: 1096 Z-score: 461.7 bits: 94.7 E(32554): 2.1e-19
Smith-Waterman score: 1096; 46.1% identity (68.2% similar) in 421 aa overlap (1-411:89-496)
10 20 30
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQ
::::: :: ::: .:.: :.:::::.::::
CCDS13 SLPQPEQRPYSCPQLHCGKAFASKYKLYRHMATHSAQKPHQCMYCDKMFHRKDHLRNHLQ
60 70 80 90 100 110
40 50 60 70 80 90
pF1KB9 THDPNKMAFGCEECGKKYNTMLGYKRHLALHAASSGDLTCGVCALELGSTEVLLDHLKAH
:::::: :. : ::::.::: :::.::::.::::::::.: :: . ::..::.:::::
CCDS13 THDPNKEALHCSECGKNYNTKLGYRRHLAMHAASSGDLSCKVCLQTFESTQALLEHLKAH
120 130 140 150 160 170
100 110 120 130 140 150
pF1KB9 AEEKPPSGTKEKKHQCDHCERCFYTRKDVRRHLVVHTGCKDFLCQFCAQRFGRKDHLTRH
.. . .:.::::: ::::.: :::::::::::::::: ::::::.::::::::::::::
CCDS13 SR-RVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHTGRKDFLCQYCAQRFGRKDHLTRH
180 190 200 210 220 230
160 170 180 190 200 210
pF1KB9 TKKTHSQELMKESLQTGDLLSTFHTISPSFQLKAAALPPFPLGASAQNGLASSLPAEVHS
.::.:::::.: . . :.:. . . : . ..: : . ... : ....:. .
CCDS13 VKKSHSQELLKIKTEPVDMLGLL-SCSSTVSVKEELSPVLCMASRDVMG-TKAFPGML-P
240 250 260 270 280 290
220 230 240 250 260
pF1KB9 LTLSPPEQAAQPMQPLPESLA--SL-----HP-SVSPGSPPPPLPNHKYNTTSTSYSPLA
. . . ..: .:.::. .: .: :: : : :: ::. :::: :
CCDS13 MGMYGAHIPTMPSTGVPHSLVHNTLPMGMSYPLESSPISSPAQLPP-KYQLGSTSYLP-D
300 310 320 330 340 350
270 280 290 300 310 320
pF1KB9 SLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLAKGNAGKVNLPKELPADAVNLTI
.:: :... .: : .: :. . :: .: : . .. : : ::. .
CCDS13 KLP-KVEVDSFLA-ELPGSLSLSSAE-PQPASPQPAAAAALLDEALLAKS-PANLSEALC
360 370 380 390 400
330 340 350 360 370 380
pF1KB9 PASLDLSPLLGFW--QLPPPATQNTFGNSTLALGPGESLPHRLSCLGQQQQEPPLAMGTV
:..:.: :::: .::: .. :. ... . .:. : :. : : :. : : : .
CCDS13 AANVDFSHLLGFLPLNLPPCNPPGATGGLVMGYSQAEAQPL-LTTLQAQPQDSPGAGGPL
410 420 430 440 450 460
390 400 410
pF1KB9 SLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
..: :: .: ::..: .:. ::.::.::.
CCDS13 NFG--PLHSLPPVFTSGLSSTTLPRFHQAFQ
470 480 490
>>CCDS47860.1 PLAG1 gene_id:5324|Hs108|chr8 (418 aa)
initn: 957 init1: 487 opt: 1028 Z-score: 435.8 bits: 89.6 E(32554): 5.9e-18
Smith-Waterman score: 1041; 44.3% identity (66.5% similar) in 427 aa overlap (1-411:1-418)
10 20 30 40 50 60
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
::::::.:.:.: .::: :.:::::::::.:::::: .: ::::::.::: ::.::::::
CCDS47 MATHSPEKTHKCNYCEKMFHRKDHLKNHLHTHDPNKETFKCEECGKNYNTKLGFKRHLAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
:::.:::::: :: . :: :::.:::.:: : .:.:::::::.::.: ::::::::
CCDS47 HAATSGDLTCKVCLQTFESTGVLLEHLKSHAG-KSSGGVKEKKHQCEHCDRRFYTRKDVR
70 80 90 100 110
130 140 150 160 170 180
pF1KB9 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
::.::::: ::::::.:::::::::::::: ::.:.:::.: . . :.:. : : . :
CCDS47 RHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHNQELLKVKTEPVDFLDPF-TCNVSV
120 130 140 150 160 170
190 200 210 220 230
pF1KB9 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVS-P
.: :: . : .: :.. . .. . : :. : . ...: ... :
CCDS47 PIKDELLPVMSLPSSEL--LSKPFTNTLQLNLYNTPFQSMQSSGSAHQMITTLPLGMTCP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB9 GSPPPPLPNH----KYNTTSTSYS---PLASLPLKADTKGFCNISLFEDLPL--QEPQSP
. :.: :: .::::. : :::.. ... . : .: :. :.
CCDS47 IDMDTVHPSHHLSFKYPFSSTSYAISIPEKEQPLKGEIESYL-MELQGGVPSSSQDSQAS
240 250 260 270 280 290
300 310 320 330 340
pF1KB9 QKLNPGFDLAKGN----AGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTF
.. . :.: :. :: ..: : . . :. :: ::.: :..: : : : .
CCDS47 SSSKLGLDPQIGSLDDGAGDLSLSKSSISISDPLNTPA-LDFSQLFNFIPLNGPP-YNPL
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB9 GNSTLALGPGESLPHR-LSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAG-TGSAILP
. ..:... .. : .: : : :. .:..::.: . .:... . :. ::
CCDS47 SVGSLGMSYSQEEAHSSVSQLPPQTQDLQDPANTIGLGSLH--SLSAAFTSSLSTSTTLP
360 370 380 390 400 410
410
pF1KB9 HFHHAFR
.::.::.
CCDS47 RFHQAFQ
>>CCDS6165.1 PLAG1 gene_id:5324|Hs108|chr8 (500 aa)
initn: 957 init1: 487 opt: 1028 Z-score: 434.9 bits: 89.7 E(32554): 6.7e-18
Smith-Waterman score: 1041; 44.3% identity (66.5% similar) in 427 aa overlap (1-411:83-500)
10 20 30
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQ
::::::.:.:.: .::: :.:::::::::.
CCDS61 SYSHTGERPYKCIQQDCTKAFVSKYKLQRHMATHSPEKTHKCNYCEKMFHRKDHLKNHLH
60 70 80 90 100 110
40 50 60 70 80 90
pF1KB9 THDPNKMAFGCEECGKKYNTMLGYKRHLALHAASSGDLTCGVCALELGSTEVLLDHLKAH
:::::: .: ::::::.::: ::.:::::::::.:::::: :: . :: :::.:::.:
CCDS61 THDPNKETFKCEECGKNYNTKLGFKRHLALHAATSGDLTCKVCLQTFESTGVLLEHLKSH
120 130 140 150 160 170
100 110 120 130 140 150
pF1KB9 AEEKPPSGTKEKKHQCDHCERCFYTRKDVRRHLVVHTGCKDFLCQFCAQRFGRKDHLTRH
: : .:.:::::::.::.: ::::::::::.::::: ::::::.::::::::::::::
CCDS61 AG-KSSGGVKEKKHQCEHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRH
180 190 200 210 220 230
160 170 180 190 200 210
pF1KB9 TKKTHSQELMKESLQTGDLLSTFHTISPSFQLKAAALPPFPLGASAQNGLASSLPAEVHS
::.:.:::.: . . :.:. : : . : .: :: . : .: :.. . ..
CCDS61 MKKSHNQELLKVKTEPVDFLDPF-TCNVSVPIKDELLPVMSLPSSEL--LSKPFTNTLQL
240 250 260 270 280
220 230 240 250 260
pF1KB9 LTLSPPEQAAQPMQPLPESLASLHPSVS-PGSPPPPLPNH----KYNTTSTSYS---PLA
. : :. : . ...: ... : . :.: :: .::::. :
CCDS61 NLYNTPFQSMQSSGSAHQMITTLPLGMTCPIDMDTVHPSHHLSFKYPFSSTSYAISIPEK
290 300 310 320 330 340
270 280 290 300 310
pF1KB9 SLPLKADTKGFCNISLFEDLPL--QEPQSPQKLNPGFDLAKGN----AGKVNLPKELPAD
:::.. ... . : .: :. :. .. . :.: :. :: ..: : .
CCDS61 EQPLKGEIESYL-MELQGGVPSSSQDSQASSSSKLGLDPQIGSLDDGAGDLSLSKSSISI
350 360 370 380 390 400
320 330 340 350 360 370
pF1KB9 AVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLPHR-LSCLGQQQQEPPL
. :. :: ::.: :..: : : : .. ..:... .. : .: : : :.
CCDS61 SDPLNTPA-LDFSQLFNFIPLNGPP-YNPLSVGSLGMSYSQEEAHSSVSQLPPQTQDLQD
410 420 430 440 450 460
380 390 400 410
pF1KB9 AMGTVSLGQLPLPPIPHVFSAG-TGSAILPHFHHAFR
.:..::.: . .:... . :. ::.::.::.
CCDS61 PANTIGLGSLH--SLSAAFTSSLSTSTTLPRFHQAFQ
470 480 490 500
411 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:54:26 2016 done: Fri Nov 4 17:54:26 2016
Total Scan time: 3.270 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]