Result of FASTA (ccds) for
pF1KB9599
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9599, 439 aa
1>>>pF1KB9599 439 - 439 aa - 439 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8779+/-0.000821; mu= 9.0850+/- 0.049
mean_var=225.7085+/-47.743, 0's: 0 Z-trim(116.4): 68 B-trim: 586 in 2/50
Lambda= 0.085369
statistics sampled from 16924 (16994) to 16924 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.82), E-opt: 0.2 (0.522), width: 16
Scan time: 2.910
The best scores are: opt bits E(32554)
CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 ( 439) 3023 384.6 1e-106
CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 ( 417) 2400 307.9 1.3e-83
CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 ( 417) 2394 307.1 2.1e-83
CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 ( 416) 2372 304.4 1.4e-82
CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 ( 416) 2370 304.2 1.6e-82
CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 ( 408) 1925 249.4 5e-66
CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 ( 495) 756 105.5 1.3e-22
CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 ( 465) 743 103.8 3.7e-22
CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 ( 478) 671 95.0 1.7e-19
CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 ( 319) 614 87.8 1.7e-17
CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 ( 373) 583 84.0 2.7e-16
CCDS10959.1 FOXL1 gene_id:2300|Hs108|chr16 ( 345) 549 79.8 4.7e-15
CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 ( 553) 523 76.8 5.9e-14
CCDS13192.1 FOXS1 gene_id:2307|Hs108|chr20 ( 330) 517 75.8 7e-14
CCDS10958.1 FOXC2 gene_id:2303|Hs108|chr16 ( 501) 512 75.4 1.4e-13
CCDS32255.1 FOXB1 gene_id:27023|Hs108|chr15 ( 325) 496 73.3 4.1e-13
CCDS10957.2 FOXF1 gene_id:2294|Hs108|chr16 ( 379) 487 72.2 9.9e-13
CCDS3105.1 FOXL2 gene_id:668|Hs108|chr3 ( 376) 480 71.3 1.8e-12
CCDS12677.1 FOXA3 gene_id:3171|Hs108|chr19 ( 350) 475 70.7 2.6e-12
CCDS77433.1 FOXI3 gene_id:344167|Hs108|chr2 ( 420) 475 70.8 3e-12
CCDS4472.1 FOXF2 gene_id:2295|Hs108|chr6 ( 444) 461 69.1 1e-11
CCDS13147.1 FOXA2 gene_id:3170|Hs108|chr20 ( 457) 458 68.7 1.3e-11
CCDS46585.1 FOXA2 gene_id:3170|Hs108|chr20 ( 463) 458 68.7 1.3e-11
CCDS4471.1 FOXQ1 gene_id:94234|Hs108|chr6 ( 403) 451 67.8 2.2e-11
CCDS35045.1 FOXB2 gene_id:442425|Hs108|chr9 ( 432) 449 67.6 2.8e-11
CCDS9665.1 FOXA1 gene_id:3169|Hs108|chr14 ( 472) 449 67.6 2.9e-11
CCDS7655.2 FOXI2 gene_id:399823|Hs108|chr10 ( 318) 440 66.3 4.9e-11
CCDS4372.1 FOXI1 gene_id:2299|Hs108|chr5 ( 378) 437 66.1 7e-11
>>CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 (439 aa)
initn: 3023 init1: 3023 opt: 3023 Z-score: 2029.3 bits: 384.6 E(32554): 1e-106
Smith-Waterman score: 3023; 98.9% identity (99.3% similar) in 439 aa overlap (1-439:1-439)
10 20 30 40 50 60
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEEEAASQQFLEQSLQPGLQVARW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEEEAASQQFLEQSLQPGLQVARW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPSSYIALITMAILQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPSSYIALITMAILQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 PHKRLTLSGICAFISGRFPYYCRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGNYWSL
::::::::::::::: ::::: ::::::::::::::::::::::::::::::::::::::
CCDS34 PHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGNYWSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 DPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGRLLGAPAPPQ
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
CCDS34 DPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGPLLGAPAPPQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 PVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCSPHLV
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 PVPGAYPNTGPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCSPHLV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 LSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQACRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQACRT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 ILQQQQRHQEEDCANGCAPTKGAVLGGHLSAASALLRYQAVAEGSGLTSLAAPLGGEGTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ILQQQQRHQEEDCANGCAPTKGAVLGGHLSAASALLRYQAVAEGSGLTSLAAPLGGEGTS
370 380 390 400 410 420
430
pF1KB9 PVFLVSPTPGSLAESAGPS
:::::::::.:::::::::
CCDS34 PVFLVSPTPSSLAESAGPS
430
>>CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 (417 aa)
initn: 2197 init1: 2197 opt: 2400 Z-score: 1614.9 bits: 307.9 E(32554): 1.3e-83
Smith-Waterman score: 2402; 87.4% identity (90.1% similar) in 404 aa overlap (1-400:1-395)
10 20 30 40 50
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDE----EEAASQQFLEQSLQPGLQ
:::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
CCDS43 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPSSYIALITMA
::::::::::::::::::::::::::::.::::::::::::::::::::: :::::::::
CCDS43 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 ILQSPHKRLTLSGICAFISGRFPYYCRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGN
:::.::::::::::::::::::::: ::::::::::::::::::::::::::::.:::::
CCDS43 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGRLLGAP
::::::::::::::::::::::::.::: ::::::::::::::::::::::::: :::::
CCDS43 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCS
::::::::::::::::::::::::::: ::::::::.::::::::::: :::::::::::
CCDS43 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQ
::::::::::::::::::::::::::::: :::::::::::::.::::::::: ::::.:
CCDS43 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB9 ACRTILQQQQRHQEEDCANGCAPTKGAVLGGHLSAASALLRYQAVAEGSGLTSLAAPLGG
:: : : : : .:: : .:.. : :
CCDS43 ACCI-----PRPLPLCCK--CPPP--PLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTC
370 380 390 400 410
420 430
pF1KB9 EGTSPVFLVSPTPGSLAESAGPS
CCDS43 RPRRPC
>>CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 (417 aa)
initn: 2191 init1: 2191 opt: 2394 Z-score: 1610.9 bits: 307.1 E(32554): 2.1e-83
Smith-Waterman score: 2396; 87.4% identity (90.1% similar) in 404 aa overlap (1-400:1-395)
10 20 30 40 50
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDE----EEAASQQFLEQSLQPGLQ
:::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
CCDS43 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPSSYIALITMA
::::::::::::::::::::::::::::.::::::::::::::::::::: :::::::::
CCDS43 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 ILQSPHKRLTLSGICAFISGRFPYYCRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGN
:::.::::::::::::::::::::: ::::::::::::::::::::::::::::.:::::
CCDS43 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGRLLGAP
::::::::::::::::::::::::.::: ::::::::::::::::::::::.:: :::::
CCDS43 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCS
::::::::::::::::::::::::::: ::::::::.::::::::::: :::::::::::
CCDS43 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQ
::::::::::::::::::::::::::::: ::::::::::::::::::::::: ::::.:
CCDS43 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB9 ACRTILQQQQRHQEEDCANGCAPTKGAVLGGHLSAASALLRYQAVAEGSGLTSLAAPLGG
:: : : : : .:: : .:.. : :
CCDS43 ACCI-----PRPLPLCCK--CPPP--PLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTC
370 380 390 400 410
420 430
pF1KB9 EGTSPVFLVSPTPGSLAESAGPS
CCDS43 RPRRPC
>>CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 (416 aa)
initn: 2178 init1: 2178 opt: 2372 Z-score: 1596.2 bits: 304.4 E(32554): 1.4e-82
Smith-Waterman score: 2372; 93.9% identity (95.9% similar) in 362 aa overlap (1-358:1-362)
10 20 30 40 50
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDE----EEAASQQFLEQSLQPGLQ
:::::::: ::::::::::::::::::::::::::::: :: : :::::::::::::
CCDS47 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPSSYIALITMA
::::::::::::::::::::::::::::.::::::::::::::::::::: :::::::::
CCDS47 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 ILQSPHKRLTLSGICAFISGRFPYYCRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGN
:::.::::::::::::::::::::: ::::::::::::::::::::::::::::.:::::
CCDS47 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGRLLGAP
::::::::::::::::::::::::.::: ::::::::::::::::::::::.:: :::::
CCDS47 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCS
::::::::::::::::: ::::::::: ::::::::.:::::::::::::::::::::::
CCDS47 APPQPVPGAYPNTAPGRCPYALLHPHPLRYLLLSAPVYAGAPKKAEGADLATPAPFPCCS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQ
::::::::::::::::::::::::::::: ::::::::::::::::::::::: ::::.:
CCDS47 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB9 ACRTILQQQQRHQEEDCANGCAPTKGAVLGGHLSAASALLRYQAVAEGSGLTSLAAPLGG
::
CCDS47 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC
370 380 390 400 410
>>CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 (416 aa)
initn: 2176 init1: 2176 opt: 2370 Z-score: 1594.9 bits: 304.2 E(32554): 1.6e-82
Smith-Waterman score: 2370; 93.9% identity (95.9% similar) in 362 aa overlap (1-358:1-362)
10 20 30 40 50
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDE----EEAASQQFLEQSLQPGLQ
:::::::: ::::::::::::::::::::::::::::: :: : :::::::::::::
CCDS75 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPSSYIALITMA
::::::::::::::::::::::::::::.::::::::::::::::::::: :::::::::
CCDS75 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 ILQSPHKRLTLSGICAFISGRFPYYCRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGN
:::.::::::::::::::::::::: ::::::::::::::::::::::::::::.:::::
CCDS75 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGRLLGAP
::::::::::::::::::::::::.::: ::::::::::::::::::::::.:: :::::
CCDS75 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCS
::::::::::::::::::::::::::: ::::::: .:::::::::::::::::::::::
CCDS75 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQ
::::::::::::::::::::::::::::: ::::::::::::::::::::::: ::::.:
CCDS75 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB9 ACRTILQQQQRHQEEDCANGCAPTKGAVLGGHLSAASALLRYQAVAEGSGLTSLAAPLGG
::
CCDS75 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC
370 380 390 400 410
>>CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 (408 aa)
initn: 1810 init1: 1503 opt: 1925 Z-score: 1298.8 bits: 249.4 E(32554): 5e-66
Smith-Waterman score: 1925; 92.4% identity (94.7% similar) in 303 aa overlap (1-299:1-302)
10 20 30 40 50
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDE----EEAASQQFLEQSLQPGLQ
:::::::: ::::::::::::::::::::::::::::: :: :::.:::::::::::
CCDS21 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 VARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPSSYIALITMA
:::::::::::::::::: ::::::::::::::::::::::::::::::: :::::::::
CCDS21 VARWGGVALPREHIEGGG-PSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110
120 130 140 150 160 170
pF1KB9 ILQSPHKRLTLSGICAFISGRFPYYCRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGN
::::::::::::::::::::::::: ::::::::::::::::::::::::::::.::::.
CCDS21 ILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGRLLGAP
::::::::::::::::::::::::.::: ::::::::::::::::::::::::: :::::
CCDS21 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB9 APPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCS
: :::::::::::::::::::::::::::::::::::::::::::::::::::. .: .
CCDS21 ALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQ
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB9 PHLVLSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQ
: :
CCDS21 PSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS
300 310 320 330 340 350
>>CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 (495 aa)
initn: 753 init1: 669 opt: 756 Z-score: 519.7 bits: 105.5 E(32554): 1.3e-22
Smith-Waterman score: 765; 40.7% identity (53.7% similar) in 447 aa overlap (10-434:42-450)
10 20 30
pF1KB9 MNLPRAERLRSTPQRSLRD--SDGEDGKIDVLGEEEDED
:: : :. :: :.. . . ::
CCDS30 SSESSPAALSEADADIDVVGGGSGGGELPARSGP-RAPRDVLPHGHEPPAEEAEADLAED
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB9 EEEAASQQFLEQSLQPGLQVARWGGVALP-REHIEGGGGPSDPSEFGTEFRAPPRSAAAS
:::... . : . .: .: : .:..::. :. :: ..::.
CCDS30 EEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPG-PG--------PPSGGAAT
80 90 100 110 120
100 110 120 130 140 150
pF1KB9 EDARQP-AKPPSSYIALITMAILQSPHKRLTLSGICAFISGRFPYYCRKFPAWQNSIRHN
:.: .::: ::::::::::::::.:::::: :: ::::::::: .::::::::::::
CCDS30 ---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHN
130 140 150 160 170
160 170 180 190 200 210
pF1KB9 LSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPF
::::::::::::::: :::::::.::: : :::::::::::::::.: :: : : :::
CCDS30 LSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKR-QPLPPPH-PHPH
180 190 200 210 220 230
220 230 240 250 260
pF1KB9 PLP-----AAHAALHNPR---PG-RLLGAPAPPQ----PVPGAYPNTAPGRRPYALLHPH
: : .. :: .: :: :: . :. :: : :: :. :::
CCDS30 PHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPP---PGPAPHP--HPH
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB9 PPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSA
: . . .: : : .. . :.: : : : : :. : : :
CCDS30 PHAFAFAAAAAAAPCQLSVPPGRAAAPPPGP---P--------TASVFAGAGSAPAPAPA
300 310 320 330 340
330 340 350 360 370
pF1KB9 LRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQACRTILQQQQRHQEEDCA---NGCAP
: .: : :: : :: :.. : : .:
CCDS30 ---SGSGPGPGPAGL----PAFLGAELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKT
350 360 370 380 390
380 390 400 410 420 430
pF1KB9 TKGAVLGGHLSAASALLRYQAV-AEGSGLTSLAAPLGGEGT-SPVFLVSPTPGSLAESAG
:. :: ..:. .. : : . : : .:::. .: : .. ::. :.
CCDS30 DAGGGAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPGGQAQVLA
400 410 420 430 440 450
pF1KB9 PS
CCDS30 MLTAPALAPVAGHIRLSHPGDALLSSGSRFASKVAGLSGCHF
460 470 480 490
>>CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 (465 aa)
initn: 728 init1: 626 opt: 743 Z-score: 511.4 bits: 103.8 E(32554): 3.7e-22
Smith-Waterman score: 765; 42.3% identity (58.7% similar) in 421 aa overlap (14-415:53-444)
10 20 30 40
pF1KB9 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEEEAAS
.: :. ::: ... : ::::.:. :
CCDS75 GEGEDEEDEEEEDDDEGGGGGPRLAVPAQRRRRRRSYAGED-ELEDLEEEEDDDDILLAP
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB9 QQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQP-
. :: : .:.. :::: . . :. :. :..:
CCDS75 PAGGSPA-PPGPAPAAGAGAG-------GGGGGGGAGGGGS----------AGSGAKNPL
90 100 110 120
110 120 130 140 150 160
pF1KB9 AKPPSSYIALITMAILQSPHKRLTLSGICAFISGRFPYYCRKFPAWQNSIRHNLSLNDCF
.::: ::::::::::::::.:::::: :: ::::::::: .:::::::::::::::::::
CCDS75 VKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCF
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 VKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQRHQPT--PGAHLPHPFPLPAA
:::::::: :::::::.::: : :::::::::::::::.: :: :.: . . : .:
CCDS75 VKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKR-QPLLPPNAAAAESLLLRGA
190 200 210 220 230 240
230 240 250 260 270
pF1KB9 HAA--LHNPRPGRLLGAPAPPQPVPGAYPNTAPGRRPYAL-LHPHPPRYLLLSAPAYAGA
:: .: . : :::: : : :: . .: :.: : :. : :..: : :.:
CCDS75 GAAGGAGDPAAAAALFPPAPPPP-PHAY-GYGPYGCGYGLQLPPYAPPSALFAAAAAAAA
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB9 PKKAEGADLATPAPFPCCSPHLVLS-LGRRARVWRRHREADASLSALRVSC-KGSGERVQ
: . .: : : :: . . :.: : .: : . : . : .: :..: ..
CCDS75 ---AAAFHPHSPPPPP--PPHGAAAELARTAFGYRPHPLGAALPGPLPASAAKAGGPGAS
310 320 330 340 350
340 350 360 370 380
pF1KB9 GLRR----VCPRPRGATAPCSSDRQACRTILQQQQRHQEEDCANGCAPTKGAVLGG----
.: : . :. .: .. : .. : . : :: :. ::
CCDS75 ALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPPAP--GSSGGGCAAQ
360 370 380 390 400 410
390 400 410 420 430
pF1KB9 -HLSAASALLRYQAVAEGSGLTSLA--APLGGEGTSPVFLVSPTPGSLAESAGPS
.. :.:: : ..: ... .:.. : ::
CCDS75 AAVGPAAALTRSLVAAAAAAASSVSSSAALGTLHQGTALSSVENFTARISNC
420 430 440 450 460
>>CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 (478 aa)
initn: 684 init1: 643 opt: 671 Z-score: 463.3 bits: 95.0 E(32554): 1.7e-19
Smith-Waterman score: 680; 39.6% identity (57.6% similar) in 389 aa overlap (61-436:106-460)
40 50 60 70 80 90
pF1KB9 GEEEDEDEEEAASQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTEFRAPP
:::. .: .::::. : :. :
CCDS62 QQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVG-GEEGGASGGGPGAGS--GSAGGLAP
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB9 RSAAASEDARQPAKPPSSYIALITMAILQSPHKRLTLSGICAFISGRFPYYCRKFPAWQN
:. . .::: ::::::::::::::.:.::::::: :::.::::: .:::::::
CCDS62 -----SKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQN
140 150 160 170 180
160 170 180 190 200 210
pF1KB9 SIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAH
:::::::::::::::::::: :::::::.::: :.:::::::::::::::.::: :
CCDS62 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQE---H
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB9 LPHPFPLPAAHAALHNPRPGRLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLS
: . : . .. . :: .: : .: .: : : ::
CCDS62 LREQTALMMQSFGAYSLAAAA--GAAGPYGRPYGLHPAAAAG----AYSHP---------
250 260 270 280
280 290 300 310 320
pF1KB9 APAYAGAPKKAEGADLATPAPFPCCSPHLVL----SLGRRARVWRRHREADASLSALRVS
: : :.: : : : : : . : :::.: .. . .:. :...
CCDS62 AAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAF--GSQLGPGLQ-LQLN
290 300 310 320 330 340
330 340 350 360 370 380
pF1KB9 CKGSGERVQGLRRVCPRPRGATAPCSSDRQACRTILQQQQRHQEEDCANGCAPTKGAVLG
:.. . : . :.:: ... . : .. .. : : . . ..: :
CCDS62 SLGAAAAAAGTAGAA----GTTASLIKSEPSARPSFSIENIIGGGPAAPGGSAVGAGVAG
350 360 370 380 390 400
390 400 410 420 430
pF1KB9 GHL-----SAASALLRYQAVAEGSGLTSLAAPLGGEGTS----PVFLVSPTPGSLAESAG
: :.:...:: .......: . ::. :. :.. : : :.. . :
CCDS62 GTGGSGGGSTAQSFLRPPGTVQSAALMATHQPLSLSRTTATIAPILSV-PLSGQFLQPAA
410 420 430 440 450 460
pF1KB9 PS
CCDS62 SAAAAAAAAAQAKWPAQ
470
>>CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 (319 aa)
initn: 563 init1: 518 opt: 614 Z-score: 427.5 bits: 87.8 E(32554): 1.7e-17
Smith-Waterman score: 616; 46.4% identity (62.0% similar) in 250 aa overlap (53-296:17-241)
30 40 50 60 70 80
pF1KB9 EDGKIDVLGEEEDEDEEEAASQQFLEQSLQPGLQ-VARWGGVALPREHIEGGGGPSDPSE
:.: :: : : : : : . .
CCDS55 MAGRSDMDPPAAFSGFPALPAVAPSGPPPSPLAGAEPGREPEEAAA
10 20 30 40
90 100 110 120 130
pF1KB9 FGTEFRAPPRSAAASEDARQP---AKPPSSYIALITMAILQSPHKRLTLSGICAFISGRF
: :: . . .. :.: .::: ::::::.::. ..: .::::..: ::. ::
CCDS55 -GRGEAAPTPAPGPGRRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERF
50 60 70 80 90 100
140 150 160 170 180 190
pF1KB9 PYYCRKFP-AWQNSIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRR
.: : : :::::::::.:::::::.::::: :::::::.::::. ::::::::::::
CCDS55 AFY-RDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRR
110 120 130 140 150 160
200 210 220 230 240 250
pF1KB9 KRFQRHQ-PTPGAHLPHPFPLPAAHAALHNPRPGRLLGAPAPPQPVPGAYPNTAPGRRPY
:::.: . :. .: : : ::: .: . : :: : .: ::. ::
CCDS55 KRFKRAELPAHAAAAPGP-PLPFPYAP-YAPAPGPALLVP-PPSAGPG------------
170 180 190 200
260 270 280 290 300 310
pF1KB9 ALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREA
: :: :. :. . .. . : : :..: : :::.
CCDS55 ----PSPPARLF-SVDSLVNL--QPELAGLGAPEP-PCCAAPDAAAAAFPPCAAAASPPL
210 220 230 240 250 260
320 330 340 350 360 370
pF1KB9 DASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQACRTILQQQQRHQEEDCANG
CCDS55 YSQVPDRLVLPATRPGPGPLPAEPLLALAGPAAALGPLSPGEAYLRQPGFASGLERYL
270 280 290 300 310
439 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:36:08 2016 done: Fri Nov 4 17:36:09 2016
Total Scan time: 2.910 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]