Result of FASTA (ccds) for
pF1KB9598
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9598, 478 aa
1>>>pF1KB9598 478 - 478 aa - 478 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.8266+/-0.000996; mu= 6.2925+/- 0.061
mean_var=312.7421+/-64.312, 0's: 0 Z-trim(115.9): 76 B-trim: 753 in 1/52
Lambda= 0.072524
statistics sampled from 16412 (16486) to 16412 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.787), E-opt: 0.2 (0.506), width: 16
Scan time: 4.070
The best scores are: opt bits E(32554)
CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 ( 478) 3213 349.4 4.8e-96
CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 ( 465) 882 105.5 1.2e-22
CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 ( 495) 843 101.5 2.2e-21
CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 ( 373) 707 87.1 3.5e-17
CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 ( 408) 700 86.4 6.1e-17
CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 ( 417) 685 84.9 1.8e-16
CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 ( 417) 685 84.9 1.8e-16
CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 ( 416) 684 84.8 2e-16
CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 ( 416) 683 84.6 2.1e-16
CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 ( 439) 674 83.7 4.2e-16
CCDS10958.1 FOXC2 gene_id:2303|Hs108|chr16 ( 501) 620 78.2 2.3e-14
CCDS35045.1 FOXB2 gene_id:442425|Hs108|chr9 ( 432) 600 76.0 9e-14
CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 ( 319) 586 74.4 2e-13
CCDS4472.1 FOXF2 gene_id:2295|Hs108|chr6 ( 444) 575 73.4 5.6e-13
CCDS3105.1 FOXL2 gene_id:668|Hs108|chr3 ( 376) 564 72.1 1.1e-12
CCDS32255.1 FOXB1 gene_id:27023|Hs108|chr15 ( 325) 561 71.8 1.3e-12
CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 ( 553) 560 71.9 1.9e-12
CCDS9636.1 FOXG1 gene_id:2290|Hs108|chr14 ( 489) 556 71.4 2.4e-12
CCDS13147.1 FOXA2 gene_id:3170|Hs108|chr20 ( 457) 548 70.6 4e-12
CCDS46585.1 FOXA2 gene_id:3170|Hs108|chr20 ( 463) 548 70.6 4.1e-12
CCDS77433.1 FOXI3 gene_id:344167|Hs108|chr2 ( 420) 537 69.4 8.5e-12
CCDS7655.2 FOXI2 gene_id:399823|Hs108|chr10 ( 318) 531 68.6 1.1e-11
CCDS10957.2 FOXF1 gene_id:2294|Hs108|chr16 ( 379) 526 68.2 1.8e-11
CCDS12677.1 FOXA3 gene_id:3171|Hs108|chr19 ( 350) 523 67.8 2.1e-11
CCDS4471.1 FOXQ1 gene_id:94234|Hs108|chr6 ( 403) 517 67.3 3.5e-11
CCDS13192.1 FOXS1 gene_id:2307|Hs108|chr20 ( 330) 514 66.8 3.9e-11
CCDS10959.1 FOXL1 gene_id:2300|Hs108|chr16 ( 345) 508 66.2 6.1e-11
>>CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 (478 aa)
initn: 3213 init1: 3213 opt: 3213 Z-score: 1837.8 bits: 349.4 E(32554): 4.8e-96
Smith-Waterman score: 3213; 100.0% identity (100.0% similar) in 478 aa overlap (1-478:1-478)
10 20 30 40 50 60
pF1KB9 MTLSGGGSASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 MTLSGGGSASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 VPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 GAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYRE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 KFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 QQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 QQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 LQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 LQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 AGTTASLIKSEPSARPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGGGSTAQSFLRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 AGTTASLIKSEPSARPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGGGSTAQSFLRPP
370 380 390 400 410 420
430 440 450 460 470
pF1KB9 GTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKWPAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 GTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKWPAQ
430 440 450 460 470
>>CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 (465 aa)
initn: 766 init1: 766 opt: 882 Z-score: 519.8 bits: 105.5 E(32554): 1.2e-22
Smith-Waterman score: 1047; 45.7% identity (61.1% similar) in 486 aa overlap (1-447:1-446)
10 20 30 40 50
pF1KB9 MTLSGGGSASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGP----PELRLD
:::: :: :: ::..::::::::.: .:.. : . .:: : :
CCDS75 MTLS--TEMSDASG----LAEETDIDVVGEGEDEEDEEEEDDDEGGGGGPRLAVPAQRRR
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 EADEVPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGAS
. . . .. . : :.:. : :: :: : . :: :: ::..
CCDS75 RRRSYAGEDELEDLEEEEDDDDILLAPPAGGSPAPPG---PAPAAGAGAGGGGG--GGGA
60 70 80 90 100
120 130 140 150 160 170
pF1KB9 GGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFP
::: .::::. :: ::::::::::::::::::::.:.:::: ::::::.:::
CCDS75 GGGGSAGSGA---------KNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFP
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB9 YYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKR
:::::::::::::::::::::::::::::::::::::::::::.: ::::::::::::::
CCDS75 YYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKR
170 180 190 200 210 220
240 250 260 270
pF1KB9 FKRHQ--QEHLREQTALMMQSFGAYSLAA--AAGAA---------------GPYGRPYGL
:::. . .:.... :: . :. ::.:: :::: :::
CCDS75 FKRQPLLPPNAAAAESLLLRGAGAAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGL
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB9 HPAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQL
. : . :::::::::::. .:.. :: :: : ..::.: .::: .
CCDS75 QLPPYAPPSALFAAAAAAAAAAAF-HPHS-PP-----PPPPPHGAAAELAR--TAFGYRP
290 300 310 320 330
340 350 360 370 380 390
pF1KB9 GP-GLQLQLNSLGAAAAAAGTAGAAGTTASLIKSEPSARPSFSIENIIGG--GPAAPGGS
: : : . : :.:: :: ::.. :: ::::.:::: :::: ...
CCDS75 HPLGAALP-GPLPASAAKAGGPGASAL----------ARSPFSIESIIGGSLGPAAAAAA
340 350 360 370 380
400 410 420 430 440
pF1KB9 AVGAGVAG-------------GTGGSGGGSTAQSFLRPPGTVQSAALMATHQPLSLSRTT
:. :..:. . :.:::: .::. . : ... . . :. : ..
CCDS75 AAQAAAAAQASPSPSPVAAPPAPGSSGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSSS
390 400 410 420 430 440
450 460 470
pF1KB9 ATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKWPAQ
:... .
CCDS75 AALGTLHQGTALSSVENFTARISNC
450 460
>>CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 (495 aa)
initn: 913 init1: 740 opt: 843 Z-score: 497.5 bits: 101.5 E(32554): 2.2e-21
Smith-Waterman score: 975; 42.7% identity (57.5% similar) in 485 aa overlap (10-434:12-472)
10 20 30 40 50
pF1KB9 MTLSGGGSASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEA
:. :. ..:. :.:::::: :. : : . .:: :
CCDS30 MTLGSCCCEIMSSESSPAALSEADADIDVVGGGSGGGE-------LPARSGPRAPR----
10 20 30 40
60 70 80 90 100 110
pF1KB9 DEVPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDV------GAPEADGCKGGVGGEE
: .: ::. : .. : .. .:. :. :: : : : ..
CCDS30 DVLP-----HGHEPPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAA
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB9 GGASGGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFIS
::.: ::: ::.:. .: ::::::::::::::::::::.:.:::: ::::::
CCDS30 RGAAGPGPGPPSGGAATRSP------LVKPPYSYIALITMAILQSPKKRLTLSEICEFIS
110 120 130 140 150
180 190 200 210 220 230
pF1KB9 NRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLR
.::::::::::::::::::::::::::::::::::::::::::::::.: ::::::::::
CCDS30 GRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLR
160 170 180 190 200 210
240 250 260 270
pF1KB9 RRKRFKRHQ----QEHLREQTALMMQSFGAYSLAAAA-----GAAGPYGRPYGLH-----
:::::::. . : . . :.... .: . .: .: : :: :::
CCDS30 RRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYG
220 230 240 250 260 270
280 290 300 310 320 330
pF1KB9 ---PAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPS-----GELGRKA
:. : . :: : : :::::: ..:: . :: : : : :
CCDS30 APPPGPAPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPA
280 290 300 310 320 330
340 350 360 370
pF1KB9 AAFGSQLGPG-------LQLQLNSLGAAAAAAGTAGAAGTTASL--------IKSEPSA-
: :: ::: : .:. : ::. . ::::.:.: .:.. ..
CCDS30 PASGSGPGPGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGG
340 350 360 370 380 390
380 390 400 410
pF1KB9 ----------RPSFSIENIIG--GGPAAPGGSAVGAGVAG----GTGGSGGGSTAQSFLR
::::::..:.: :: ::: :. : : : ...: :: . . ..:
CCDS30 AGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGA--GEGSPGPPFAAAAGPGGQAQVLAMLT
400 410 420 430 440 450
420 430 440 450 460 470
pF1KB9 PPGTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKWPAQ
:. . :. . .:
CCDS30 APALAPVAGHIRLSHPGDALLSSGSRFASKVAGLSGCHF
460 470 480 490
>>CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 (373 aa)
initn: 687 init1: 574 opt: 707 Z-score: 422.0 bits: 87.1 E(32554): 3.5e-17
Smith-Waterman score: 712; 44.1% identity (63.2% similar) in 345 aa overlap (112-434:24-342)
90 100 110 120 130 140
pF1KB9 PKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSG-SAGGLAPSKPKNSLV
: .:..: :: ..: .::: ..: .
CCDS35 MTAESGPPPPQPEVLATVKEERGETAAGAGVPGEATGRGAGGRRRKRPLQRG-
10 20 30 40 50
150 160 170 180 190 200
pF1KB9 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV
::::::::::.::: ..:...:::.:: .::..:::.::.. :::::::::.:::::.
CCDS35 KPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFL
60 70 80 90 100 110
210 220 230 240 250 260
pF1KB9 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFGAYS
::::: : :::::::.:::..::::..:::::::::::: . : : : .. .: .
CCDS35 KIPREAGRPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSD---LSTYPAYMHDAAAAAA
120 130 140 150 160
270 280 290 300 310
pF1KB9 LAAAAGAAG-------PYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPV
::::.::. : .:: .:.:. ..:. :. :: . :: : : :
CCDS35 AAAAAAAAAAIFPGAVPAARPP--YPGAVYAGYAPPSLAA----PPPVYYPAASPGPCRV
170 180 190 200 210 220
320 330 340 350 360 370
pF1KB9 --LPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASLIKSE
: : :: : ::: . ::: . . : :: :...: :. : : .
CCDS35 FGLVPERPLSP--ELGPAPS------GPGGSCAFASAGAPATTTGYQPAGCTGA-----R
230 240 250 260 270
380 390 400 410
pF1KB9 PSARPSFSIENIIGGGPAAP--GGSAV--GAGVAGG-----TGGSGGG--STAQSFLRP-
: : :: : : : .:::. .:: .: .:::.:: .:.. . :
CCDS35 P-ANPSAYAAAYAGPDGAYPQGAGSAIFAAAGRLAGPASPPAGGSSGGVETTVDFYGRTS
280 290 300 310 320
420 430 440 450 460 470
pF1KB9 PGTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKWPAQ
:: : .:: : ..:
CCDS35 PG--QFGALGACYNPGGQLGGASAGAYHARHAAAYPGGIDRFVSAM
330 340 350 360 370
>>CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 (408 aa)
initn: 754 init1: 660 opt: 700 Z-score: 417.6 bits: 86.4 E(32554): 6.1e-17
Smith-Waterman score: 750; 45.2% identity (62.5% similar) in 347 aa overlap (106-410:65-405)
80 90 100 110 120 130
pF1KB9 QQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGS--GSAGGLAP-
:::. . ::::. : :. :
CCDS21 DEDEVEDEEEEASQKFLEQSLQPGLQVARWGGVALPREHIEGGGPSDPSEFGTEFRAPPR
40 50 60 70 80 90
140 150 160 170 180
pF1KB9 ----SKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNS
:. . .::::::::::::::::::.:.::::::: :::.::::::.::::::::
CCDS21 SAAASEDARQPAKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNS
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB9 IRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQE---HL
:::::::::::::::::::.::::.::.::: :.::::::::::::::::::: ::
CCDS21 IRHNLSLNDCFVKIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHL
160 170 180 190 200 210
250 260 270 280
pF1KB9 RE-------QTALMMQS----FGAYSLAAAAGAA----GPYGRPYGL-HPAAAAGAY-SH
. ..:: .:: .: . .: .: :::.: :: :
CCDS21 PHPFPLPAAHAALHNPRPGPLLGAPALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSA
220 230 240 250 260 270
290 300 310 320 330 340
pF1KB9 PAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPG-LQLQLNS
:: :.: : . . : : . ::: :.. : : :. ...: : : ......:
CCDS21 PAYAGAPKKAEGAD--LATPGTLPVLQPSLGPQP-WEEGK---GLASPPGGGCISFSIES
280 290 300 310 320
350 360 370 380 390
pF1KB9 LGAAAAAAGTAGAAGTTASLIKSEPS-ARPSFSIENIIGGGPAAPGG--------SAVGA
. .. .:::..: . . . . : ::: .:. . . :. :: .. ::
CCDS21 IMQGVRGAGTGAAQSLSPTAWSYCPLLQRPSSLSDNFAATAAASGGGLRQRLRSHQGRGA
330 340 350 360 370 380
400 410 420 430 440 450
pF1KB9 GVA-----GGTGGSGGGSTAQSFLRPPGTVQSAALMATHQPLSLSRTTATIAPILSVPLS
: : :... ::::
CCDS21 GRAPVGRVGAAAVSGGGRGL
390 400
>>CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 (417 aa)
initn: 734 init1: 666 opt: 685 Z-score: 409.0 bits: 84.9 E(32554): 1.8e-16
Smith-Waterman score: 700; 48.5% identity (61.2% similar) in 299 aa overlap (38-314:18-303)
10 20 30 40 50 60
pF1KB9 SASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADEVPPAAPH
.::: : : : .. .: :: .
CCDS43 MNLPRAERLRSTPQRSLRDSD-GED---GKIDVLGEEEDEDEVEDEE
10 20 30 40
70 80 90 100 110 120
pF1KB9 HGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSGSA
.. : .: : : : .. : :. :. . .:: : . . : : ::
CCDS43 EAASQQFLEQSLQ-P----GLQVARWGGVALPR-EHIEGGGGPSDPSEFGTKFRAPPRSA
50 60 70 80 90
130 140 150 160 170 180
pF1KB9 GGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQN
: :. . .::::::::::::::::.:.:.::::::: :::.::::::.:::::::
CCDS43 ---AASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQN
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB9 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQE---H
::::::::::::::::::::.:::::::.::: :.::::::::::::::::::: :
CCDS43 SIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAH
160 170 180 190 200 210
250 260 270 280
pF1KB9 LRE-------QTALMMQSFGAYSLAAAA-----GA---AGPYGRPYGL-HPAAAAGAY-S
: . ..:: : : : :: ..: :::.: :: :
CCDS43 LPHPFPLPAAHAALHNPRPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLS
220 230 240 250 260 270
290 300 310 320 330 340
pF1KB9 HPAAAAAA--AAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQL
:. :.: : .::: : .: .: :
CCDS43 APVYAGAPKKAEGAALATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGS
280 290 300 310 320 330
>>CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 (417 aa)
initn: 733 init1: 666 opt: 685 Z-score: 409.0 bits: 84.9 E(32554): 1.8e-16
Smith-Waterman score: 700; 48.5% identity (61.2% similar) in 299 aa overlap (38-314:18-303)
10 20 30 40 50 60
pF1KB9 SASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADEVPPAAPH
.::: : : : .. .: :: .
CCDS43 MNLPRAERLRSTPQRSLRDSD-GED---GKIDVLGEEEDEDEVEDEE
10 20 30 40
70 80 90 100 110 120
pF1KB9 HGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSGSA
.. : .: : : : .. : :. :. . .:: : . . : : ::
CCDS43 EAASQQFLEQSLQ-P----GLQVARWGGVALPR-EHIEGGGGPSDPSEFGTKFRAPPRSA
50 60 70 80 90
130 140 150 160 170 180
pF1KB9 GGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQN
: :. . .::::::::::::::::.:.:.::::::: :::.::::::.:::::::
CCDS43 ---AASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQN
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB9 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQE---H
::::::::::::::::::::.:::::::.::: :.::::::::::::::::::: :
CCDS43 SIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAH
160 170 180 190 200 210
250 260 270 280
pF1KB9 LRE-------QTALMMQSFGAYSLAAAA-----GA---AGPYGRPYGL-HPAAAAGAY-S
: . ..:: : : : :: ..: :::.: :: :
CCDS43 LPHPFPLPAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLS
220 230 240 250 260 270
290 300 310 320 330 340
pF1KB9 HPAAAAAA--AAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQL
:. :.: : .::: : .: .: :
CCDS43 APVYAGAPKKAEGAALATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGS
280 290 300 310 320 330
>>CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 (416 aa)
initn: 750 init1: 666 opt: 684 Z-score: 408.4 bits: 84.8 E(32554): 2e-16
Smith-Waterman score: 692; 54.7% identity (64.9% similar) in 225 aa overlap (106-322:65-265)
80 90 100 110 120 130
pF1KB9 QQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVG-GEEGGASGGGPGAGS--GSAGGLAP
:::. .: .::::. : :. :
CCDS47 DEDEVEDEEEEARQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFRAPP
40 50 60 70 80 90
140 150 160 170 180
pF1KB9 -----SKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQN
:. . .::::::::::::::::.:.:.::::::: :::.::::::.:::::::
CCDS47 RSAAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQN
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB9 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLRE
::::::::::::::::::::.:::::::.::: :.:::::::::::::::::::
CCDS47 SIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQL-----
160 170 180 190 200
250 260 270 280 290 300
pF1KB9 QTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYAL
. :: :. :. : : :: ::. .: : : :
CCDS47 ----------------TPGAHLPH--PFPLPAAHAALHNPHPGPLLGAPAPPQ-PVPGAY
210 220 230 240 250
310 320 330 340 350 360
pF1KB9 PPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASL
: .:: : . : :
CCDS47 PNTAPGRCPYALLHPHPLRYLLLSAPVYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRR
260 270 280 290 300 310
>>CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 (416 aa)
initn: 724 init1: 666 opt: 683 Z-score: 407.9 bits: 84.6 E(32554): 2.1e-16
Smith-Waterman score: 693; 54.7% identity (64.9% similar) in 225 aa overlap (106-322:65-265)
80 90 100 110 120 130
pF1KB9 QQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVG-GEEGGASGGGPGAGS--GSAGGLAP
:::. .: .::::. : :. :
CCDS75 DEDEVEDEEEEARQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFRAPP
40 50 60 70 80 90
140 150 160 170 180
pF1KB9 -----SKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQN
:. . .::::::::::::::::.:.:.::::::: :::.::::::.:::::::
CCDS75 RSAAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQN
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB9 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLRE
::::::::::::::::::::.:::::::.::: :.:::::::::::::::::::
CCDS75 SIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQL-----
160 170 180 190 200
250 260 270 280 290 300
pF1KB9 QTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYAL
. :: :. :. : : :: ::. .: : : :
CCDS75 ----------------TPGAHLPH--PFPLPAAHAALHNPHPGPLLGAPAPPQ-PVPGAY
210 220 230 240 250
310 320 330 340 350 360
pF1KB9 PPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASL
: .:: : . : :
CCDS75 PNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRR
260 270 280 290 300 310
>>CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 (439 aa)
initn: 725 init1: 656 opt: 674 Z-score: 402.5 bits: 83.7 E(32554): 4.2e-16
Smith-Waterman score: 695; 54.8% identity (64.9% similar) in 239 aa overlap (106-314:61-299)
80 90 100 110 120 130
pF1KB9 QQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVG-GEEGGASGGGPGAGS--GSAGGLAP
:::. .: .::::. : :. :
CCDS34 GEEEDEDEEEAASQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTEFRAPP
40 50 60 70 80 90
140 150 160 170 180
pF1KB9 -----SKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQN
:. . .::: ::::::::::::::.:.::::::: :::.::::::.:::::::
CCDS34 RSAAASEDARQPAKPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQN
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB9 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQE---H
:::::::::::::::::::: :::::::.::: :.:::::::::::::::.::: :
CCDS34 SIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAH
160 170 180 190 200 210
250 260 270 280
pF1KB9 LRE-------QTALMMQSFGAYSLAAAA-----GA---AGPYGRPYGL-HPAAAAGAY-S
: . ..:: : : : :: .:: :::.: :: :
CCDS34 LPHPFPLPAAHAALHNPRPGPLLGAPAPPQPVPGAYPNTGPGRRPYALLHPHPPRYLLLS
220 230 240 250 260 270
290 300 310 320 330 340
pF1KB9 HPAAAAAA--AAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQL
:: :.: : .: : : .: .: :
CCDS34 APAYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVSCKGS
280 290 300 310 320 330
478 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:34:54 2016 done: Fri Nov 4 17:34:55 2016
Total Scan time: 4.070 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]