Result of FASTA (omim) for
pF1KB9590
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9590, 405 aa
1>>>pF1KB9590 405 - 405 aa - 405 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4283+/-0.000328; mu= 13.6939+/- 0.021
mean_var=106.7927+/-21.198, 0's: 0 Z-trim(117.1): 55 B-trim: 0 in 0/56
Lambda= 0.124109
statistics sampled from 28753 (28808) to 28753 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.682), E-opt: 0.2 (0.338), width: 16
Scan time: 8.810
The best scores are: opt bits E(85289)
NP_057605 (OMIM: 300772) transcription factor Dp f ( 405) 2641 483.2 4.8e-136
XP_005268384 (OMIM: 189902) PREDICTED: transcripti ( 410) 1894 349.5 8.8e-96
NP_009042 (OMIM: 189902) transcription factor Dp-1 ( 410) 1894 349.5 8.8e-96
XP_016876207 (OMIM: 189902) PREDICTED: transcripti ( 406) 1868 344.8 2.2e-94
XP_005268385 (OMIM: 189902) PREDICTED: transcripti ( 406) 1868 344.8 2.2e-94
XP_011535820 (OMIM: 189902) PREDICTED: transcripti ( 382) 1571 291.6 2.1e-78
XP_016876206 (OMIM: 189902) PREDICTED: transcripti ( 476) 1571 291.7 2.5e-78
XP_016876208 (OMIM: 189902) PREDICTED: transcripti ( 337) 1565 290.5 4.1e-78
XP_016876209 (OMIM: 189902) PREDICTED: transcripti ( 315) 1477 274.7 2.1e-73
XP_016876210 (OMIM: 189902) PREDICTED: transcripti ( 315) 1477 274.7 2.1e-73
XP_005268388 (OMIM: 189902) PREDICTED: transcripti ( 311) 1451 270.1 5.3e-72
XP_011535822 (OMIM: 189902) PREDICTED: transcripti ( 381) 1154 217.0 6.4e-56
XP_011535821 (OMIM: 189902) PREDICTED: transcripti ( 381) 1154 217.0 6.4e-56
XP_016876211 (OMIM: 189902) PREDICTED: transcripti ( 242) 1148 215.8 9.4e-56
XP_005247788 (OMIM: 602160) PREDICTED: transcripti ( 447) 1035 195.7 1.9e-49
XP_011511409 (OMIM: 602160) PREDICTED: transcripti ( 360) 1029 194.6 3.3e-49
NP_001171610 (OMIM: 602160) transcription factor D ( 446) 1029 194.6 4e-49
XP_016862580 (OMIM: 602160) PREDICTED: transcripti ( 446) 1029 194.6 4e-49
XP_016862589 (OMIM: 602160) PREDICTED: transcripti ( 359) 1023 193.5 7e-49
NP_001171609 (OMIM: 602160) transcription factor D ( 386) 1017 192.4 1.6e-48
NP_006277 (OMIM: 602160) transcription factor Dp-2 ( 386) 1017 192.4 1.6e-48
XP_016862585 (OMIM: 602160) PREDICTED: transcripti ( 386) 1017 192.4 1.6e-48
XP_016862587 (OMIM: 602160) PREDICTED: transcripti ( 386) 1017 192.4 1.6e-48
XP_016862584 (OMIM: 602160) PREDICTED: transcripti ( 425) 1017 192.5 1.7e-48
XP_016862581 (OMIM: 602160) PREDICTED: transcripti ( 425) 1017 192.5 1.7e-48
XP_011511403 (OMIM: 602160) PREDICTED: transcripti ( 425) 1017 192.5 1.7e-48
XP_011511404 (OMIM: 602160) PREDICTED: transcripti ( 425) 1017 192.5 1.7e-48
XP_016862583 (OMIM: 602160) PREDICTED: transcripti ( 425) 1017 192.5 1.7e-48
XP_016862582 (OMIM: 602160) PREDICTED: transcripti ( 425) 1017 192.5 1.7e-48
XP_011511411 (OMIM: 602160) PREDICTED: transcripti ( 334) 1014 191.9 2e-48
XP_016862590 (OMIM: 602160) PREDICTED: transcripti ( 334) 1014 191.9 2e-48
XP_011511410 (OMIM: 602160) PREDICTED: transcripti ( 334) 1014 191.9 2e-48
XP_016862588 (OMIM: 602160) PREDICTED: transcripti ( 385) 1011 191.4 3.3e-48
XP_016862586 (OMIM: 602160) PREDICTED: transcripti ( 385) 1011 191.4 3.3e-48
XP_016862593 (OMIM: 602160) PREDICTED: transcripti ( 247) 1008 190.7 3.3e-48
NP_001171611 (OMIM: 602160) transcription factor D ( 418) 1011 191.4 3.5e-48
XP_011511408 (OMIM: 602160) PREDICTED: transcripti ( 424) 1011 191.4 3.6e-48
XP_011511413 (OMIM: 602160) PREDICTED: transcripti ( 333) 1008 190.8 4.2e-48
XP_016862591 (OMIM: 602160) PREDICTED: transcripti ( 333) 1008 190.8 4.2e-48
NP_001171612 (OMIM: 602160) transcription factor D ( 349) 1008 190.8 4.4e-48
XP_016862594 (OMIM: 602160) PREDICTED: transcripti ( 246) 1002 189.6 7e-48
NP_001171613 (OMIM: 602160) transcription factor D ( 310) 952 180.7 4.2e-45
XP_016862592 (OMIM: 602160) PREDICTED: transcripti ( 322) 484 97.0 7.2e-20
>>NP_057605 (OMIM: 300772) transcription factor Dp famil (405 aa)
initn: 2641 init1: 2641 opt: 2641 Z-score: 2563.5 bits: 483.2 E(85289): 4.8e-136
Smith-Waterman score: 2641; 100.0% identity (100.0% similar) in 405 aa overlap (1-405:1-405)
10 20 30 40 50 60
pF1KB9 MAKYVSLTEANEELKVLMDENQTSRPVAVHTSTVNPLGKQLLPKTFGQSSVNIDQQVVIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MAKYVSLTEANEELKVLMDENQTSRPVAVHTSTVNPLGKQLLPKTFGQSSVNIDQQVVIG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 MPQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWAGQHNRKGEKNGMGLCRLSMKVWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MPQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWAGQHNRKGEKNGMGLCRLSMKVWE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TVQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMNIISRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 TVQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMNIISRE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRNQYVEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRNQYVEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 QVSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVLMWMGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 QVSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVLMWMGM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 TFGLESGSCSAEDLKMARNLVPKALEPYVTEMAQGTFGGVFTTAGSRSNGTWLSASDLTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 TFGLESGSCSAEDLKMARNLVPKALEPYVTEMAQGTFGGVFTTAGSRSNGTWLSASDLTN
310 320 330 340 350 360
370 380 390 400
pF1KB9 IAIGMLATSSGGSQYSGSRVETPAVEEEEEEDNNDDDLSENDEDD
:::::::::::::::::::::::::::::::::::::::::::::
NP_057 IAIGMLATSSGGSQYSGSRVETPAVEEEEEEDNNDDDLSENDEDD
370 380 390 400
>>XP_005268384 (OMIM: 189902) PREDICTED: transcription f (410 aa)
initn: 1702 init1: 1640 opt: 1894 Z-score: 1840.6 bits: 349.5 E(85289): 8.8e-96
Smith-Waterman score: 1894; 75.2% identity (87.3% similar) in 411 aa overlap (1-405:1-410)
10 20 30 40 50
pF1KB9 MAKYVSLTEANEELKVLMDENQTSRP-----VAVHTSTVNPLGKQLLPKTFGQSSVNIDQ
::: ..: ::: ::::..:.: . :::: ::::::::::::::::::.::: :
XP_005 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 QVVIGMPQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWAGQHNRKGEKNGMGLCRLS
::::: :::::::: :::::. :::::::::: : ::: ::..:::::::: :: ..:
XP_005 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 MKVWETVQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMN
::: : :::::::: .::. ::::.: ::.:: ::::::: :::.::.:::::::::::
XP_005 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 IISREKKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRN
:::.:::.:::::: :::::.::::.::::.::::::::::.::.:::::::::::: ::
XP_005 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 QYVEEQVSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVL
...:.:.:. : ::::::.::::...::::::.::::.:: ::::.:...:::::: :::
XP_005 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 MWMGMTFGLESGSCSAEDLKMARNLVPKALEPYVTEMAQGTFGGVF-TTAGSRSNGTWLS
:::. ::::::::::::::::.::::::::::::::::: :::: ::::: :::: .:
XP_005 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS
310 320 330 340 350 360
360 370 380 390 400
pF1KB9 ASDLTNIAIGMLATSSGGSQYSGSRVETPAVEEEEEEDNNDDDLSENDEDD
:::::: : :::::::.:::::::::::: : :.:..:::..::::::
XP_005 ASDLTNGADGMLATSSNGSQYSGSRVETP-VSYVGEDDEEDDDFNENDEDD
370 380 390 400 410
>>NP_009042 (OMIM: 189902) transcription factor Dp-1 [Ho (410 aa)
initn: 1702 init1: 1640 opt: 1894 Z-score: 1840.6 bits: 349.5 E(85289): 8.8e-96
Smith-Waterman score: 1894; 75.2% identity (87.3% similar) in 411 aa overlap (1-405:1-410)
10 20 30 40 50
pF1KB9 MAKYVSLTEANEELKVLMDENQTSRP-----VAVHTSTVNPLGKQLLPKTFGQSSVNIDQ
::: ..: ::: ::::..:.: . :::: ::::::::::::::::::.::: :
NP_009 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 QVVIGMPQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWAGQHNRKGEKNGMGLCRLS
::::: :::::::: :::::. :::::::::: : ::: ::..:::::::: :: ..:
NP_009 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 MKVWETVQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMN
::: : :::::::: .::. ::::.: ::.:: ::::::: :::.::.:::::::::::
NP_009 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 IISREKKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRN
:::.:::.:::::: :::::.::::.::::.::::::::::.::.:::::::::::: ::
NP_009 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 QYVEEQVSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVL
...:.:.:. : ::::::.::::...::::::.::::.:: ::::.:...:::::: :::
NP_009 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 MWMGMTFGLESGSCSAEDLKMARNLVPKALEPYVTEMAQGTFGGVF-TTAGSRSNGTWLS
:::. ::::::::::::::::.::::::::::::::::: :::: ::::: :::: .:
NP_009 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS
310 320 330 340 350 360
360 370 380 390 400
pF1KB9 ASDLTNIAIGMLATSSGGSQYSGSRVETPAVEEEEEEDNNDDDLSENDEDD
:::::: : :::::::.:::::::::::: : :.:..:::..::::::
NP_009 ASDLTNGADGMLATSSNGSQYSGSRVETP-VSYVGEDDEEDDDFNENDEDD
370 380 390 400 410
>>XP_016876207 (OMIM: 189902) PREDICTED: transcription f (406 aa)
initn: 1828 init1: 1586 opt: 1868 Z-score: 1815.5 bits: 344.8 E(85289): 2.2e-94
Smith-Waterman score: 1868; 74.7% identity (86.6% similar) in 411 aa overlap (1-405:1-406)
10 20 30 40 50
pF1KB9 MAKYVSLTEANEELKVLMDENQTSRP-----VAVHTSTVNPLGKQLLPKTFGQSSVNIDQ
::: ..: ::: ::::..:.: . :::: ::::::::::::::::::.::: :
XP_016 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 QVVIGMPQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWAGQHNRKGEKNGMGLCRLS
::::: :::::::: :::::. :::::::::: : ::: ::..:::::::: :: ..:
XP_016 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 MKVWETVQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMN
::: : :::::::: .::. ::::.: ::.:: ::::::: :::.::.:::::::::::
XP_016 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 IISREKKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRN
:::.:::.:::::: :::::.::::.::::.::::::::::.::.:::::::::::: ::
XP_016 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 QYVEEQVSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVL
...:.:.:. : ::::::.::::...::::::.::::.:: ::::.:...:::::: :::
XP_016 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 MWMGMTFGLESGSCSAEDLKMARNLVPKALEPYVTEMAQGTFGGVF-TTAGSRSNGTWLS
:::. ::::::::::::::::.::::::::::::::::: :::: ::::: ::::
XP_016 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGT---
310 320 330 340 350
360 370 380 390 400
pF1KB9 ASDLTNIAIGMLATSSGGSQYSGSRVETPAVEEEEEEDNNDDDLSENDEDD
::::: : :::::::.:::::::::::: : :.:..:::..::::::
XP_016 -SDLTNGADGMLATSSNGSQYSGSRVETP-VSYVGEDDEEDDDFNENDEDD
360 370 380 390 400
>>XP_005268385 (OMIM: 189902) PREDICTED: transcription f (406 aa)
initn: 1828 init1: 1586 opt: 1868 Z-score: 1815.5 bits: 344.8 E(85289): 2.2e-94
Smith-Waterman score: 1868; 74.7% identity (86.6% similar) in 411 aa overlap (1-405:1-406)
10 20 30 40 50
pF1KB9 MAKYVSLTEANEELKVLMDENQTSRP-----VAVHTSTVNPLGKQLLPKTFGQSSVNIDQ
::: ..: ::: ::::..:.: . :::: ::::::::::::::::::.::: :
XP_005 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 QVVIGMPQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWAGQHNRKGEKNGMGLCRLS
::::: :::::::: :::::. :::::::::: : ::: ::..:::::::: :: ..:
XP_005 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 MKVWETVQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMN
::: : :::::::: .::. ::::.: ::.:: ::::::: :::.::.:::::::::::
XP_005 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 IISREKKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRN
:::.:::.:::::: :::::.::::.::::.::::::::::.::.:::::::::::: ::
XP_005 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 QYVEEQVSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVL
...:.:.:. : ::::::.::::...::::::.::::.:: ::::.:...:::::: :::
XP_005 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 MWMGMTFGLESGSCSAEDLKMARNLVPKALEPYVTEMAQGTFGGVF-TTAGSRSNGTWLS
:::. ::::::::::::::::.::::::::::::::::: :::: ::::: ::::
XP_005 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGT---
310 320 330 340 350
360 370 380 390 400
pF1KB9 ASDLTNIAIGMLATSSGGSQYSGSRVETPAVEEEEEEDNNDDDLSENDEDD
::::: : :::::::.:::::::::::: : :.:..:::..::::::
XP_005 -SDLTNGADGMLATSSNGSQYSGSRVETP-VSYVGEDDEEDDDFNENDEDD
360 370 380 390 400
>>XP_011535820 (OMIM: 189902) PREDICTED: transcription f (382 aa)
initn: 1582 init1: 1520 opt: 1571 Z-score: 1528.4 bits: 291.6 E(85289): 2.1e-78
Smith-Waterman score: 1571; 75.0% identity (87.8% similar) in 336 aa overlap (1-331:1-336)
10 20 30 40 50
pF1KB9 MAKYVSLTEANEELKVLMDENQTSRP-----VAVHTSTVNPLGKQLLPKTFGQSSVNIDQ
::: ..: ::: ::::..:.: . :::: ::::::::::::::::::.::: :
XP_011 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 QVVIGMPQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWAGQHNRKGEKNGMGLCRLS
::::: :::::::: :::::. :::::::::: : ::: ::..:::::::: :: ..:
XP_011 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 MKVWETVQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMN
::: : :::::::: .::. ::::.: ::.:: ::::::: :::.::.:::::::::::
XP_011 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 IISREKKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRN
:::.:::.:::::: :::::.::::.::::.::::::::::.::.:::::::::::: ::
XP_011 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 QYVEEQVSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVL
...:.:.:. : ::::::.::::...::::::.::::.:: ::::.:...:::::: :::
XP_011 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 MWMGMTFGLESGSCSAEDLKMARNLVPKALEPYVTEMAQGTFGGVFTTAGSRSNGTWLSA
:::. ::::::::::::::::.::::::::::::
XP_011 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEKTGLCDCTAGCPAPWRSVENTGQA
310 320 330 340 350 360
360 370 380 390 400
pF1KB9 SDLTNIAIGMLATSSGGSQYSGSRVETPAVEEEEEEDNNDDDLSENDEDD
XP_011 KDIRKLLQPSVLWNCASFCWLP
370 380
>>XP_016876206 (OMIM: 189902) PREDICTED: transcription f (476 aa)
initn: 1822 init1: 1520 opt: 1571 Z-score: 1527.1 bits: 291.7 E(85289): 2.5e-78
Smith-Waterman score: 1604; 64.5% identity (74.4% similar) in 442 aa overlap (1-370:1-442)
10 20 30 40 50
pF1KB9 MAKYVSLTEANEELKVLMDENQTSRP-----VAVHTSTVNPLGKQLLPKTFGQSSVNIDQ
::: ..: ::: ::::..:.: . :::: ::::::::::::::::::.::: :
XP_016 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 QVVIGMPQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWAGQHNRKGEKNGMGLCRLS
::::: :::::::: :::::. :::::::::: : ::: ::..:::::::: :: ..:
XP_016 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 MKVWETVQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMN
::: : :::::::: .::. ::::.: ::.:: ::::::: :::.::.:::::::::::
XP_016 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 IISREKKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRN
:::.:::.:::::: :::::.::::.::::.::::::::::.::.:::::::::::: ::
XP_016 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 QYVEEQVSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVL
...:.:.:. : ::::::.::::...::::::.::::.:: ::::.:...:::::: :::
XP_016 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
300 310 320 330
pF1KB9 MWMGMTFGLESGSCSAEDLKMARNLVPKALEPYVTE------------------------
:::. ::::::::::::::::.::::::::::::
XP_016 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEKTGLCDCTAGCPAPWRSVENTGQA
310 320 330 340 350 360
340
pF1KB9 ------------------------------------------MAQGTFGGVF-TTAGSRS
::::: :::: ::::: :
XP_016 KDIRKLLQPSVLWNCASFCWLPVRLVLFLFHDHSLIFFPFSEMAQGTVGGVFITTAGSTS
370 380 390 400 410 420
350 360 370 380 390 400
pF1KB9 NGTWLSASDLTNIAIGMLATSSGGSQYSGSRVETPAVEEEEEEDNNDDDLSENDEDD
::: .::::::: : :::::::
XP_016 NGTRFSASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
430 440 450 460 470
>>XP_016876208 (OMIM: 189902) PREDICTED: transcription f (337 aa)
initn: 1576 init1: 1514 opt: 1565 Z-score: 1523.4 bits: 290.5 E(85289): 4.1e-78
Smith-Waterman score: 1565; 74.9% identity (87.8% similar) in 335 aa overlap (1-330:1-335)
10 20 30 40 50
pF1KB9 MAKYVSLTEANEELKVLMDENQTSRP-----VAVHTSTVNPLGKQLLPKTFGQSSVNIDQ
::: ..: ::: ::::..:.: . :::: ::::::::::::::::::.::: :
XP_016 MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 QVVIGMPQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWAGQHNRKGEKNGMGLCRLS
::::: :::::::: :::::. :::::::::: : ::: ::..:::::::: :: ..:
XP_016 QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 MKVWETVQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMN
::: : :::::::: .::. ::::.: ::.:: ::::::: :::.::.:::::::::::
XP_016 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 IISREKKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRN
:::.:::.:::::: :::::.::::.::::.::::::::::.::.:::::::::::: ::
XP_016 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 QYVEEQVSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVL
...:.:.:. : ::::::.::::...::::::.::::.:: ::::.:...:::::: :::
XP_016 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 MWMGMTFGLESGSCSAEDLKMARNLVPKALEPYVTEMAQGTFGGVFTTAGSRSNGTWLSA
:::. ::::::::::::::::.:::::::::::
XP_016 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTVT
310 320 330
360 370 380 390 400
pF1KB9 SDLTNIAIGMLATSSGGSQYSGSRVETPAVEEEEEEDNNDDDLSENDEDD
>>XP_016876209 (OMIM: 189902) PREDICTED: transcription f (315 aa)
initn: 1269 init1: 1269 opt: 1477 Z-score: 1438.7 bits: 274.7 E(85289): 2.1e-73
Smith-Waterman score: 1477; 75.6% identity (89.2% similar) in 315 aa overlap (92-405:2-315)
70 80 90 100 110 120
pF1KB9 PQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWAGQHNRKGEKNGMGLCRLSMKVWET
:. : ..:::::::: :: ..:::: :
XP_016 MSTLPSKWKRNRKGEKNGKGLRHFSMKVCEK
10 20 30
130 140 150 160 170 180
pF1KB9 VQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMNIISREK
:::::::: .::. ::::.: ::.:: ::::::: :::.::.::::::::::::::.::
XP_016 VQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEK
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB9 KKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRNQYVEEQ
:.:::::: :::::.::::.::::.::::::::::.::.:::::::::::: ::...:.:
XP_016 KEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQ
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB9 VSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVLMWMGMT
.:. : ::::::.::::...::::::.::::.:: ::::.:...:::::: ::: :::.
XP_016 ASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMA
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB9 FGLESGSCSAEDLKMARNLVPKALEPYVTEMAQGTFGGVF-TTAGSRSNGTWLSASDLTN
::::::::::::::::.::::::::::::::::: :::: ::::: :::: .:::::::
XP_016 CGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFSASDLTN
220 230 240 250 260 270
370 380 390 400
pF1KB9 IAIGMLATSSGGSQYSGSRVETPAVEEEEEEDNNDDDLSENDEDD
: :::::::.:::::::::::: : :.:..:::..::::::
XP_016 GADGMLATSSNGSQYSGSRVETP-VSYVGEDDEEDDDFNENDEDD
280 290 300 310
>>XP_016876210 (OMIM: 189902) PREDICTED: transcription f (315 aa)
initn: 1269 init1: 1269 opt: 1477 Z-score: 1438.7 bits: 274.7 E(85289): 2.1e-73
Smith-Waterman score: 1477; 75.6% identity (89.2% similar) in 315 aa overlap (92-405:2-315)
70 80 90 100 110 120
pF1KB9 PQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWAGQHNRKGEKNGMGLCRLSMKVWET
:. : ..:::::::: :: ..:::: :
XP_016 MSTLPSKWKRNRKGEKNGKGLRHFSMKVCEK
10 20 30
130 140 150 160 170 180
pF1KB9 VQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMNIISREK
:::::::: .::. ::::.: ::.:: ::::::: :::.::.::::::::::::::.::
XP_016 VQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEK
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB9 KKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRNQYVEEQ
:.:::::: :::::.::::.::::.::::::::::.::.:::::::::::: ::...:.:
XP_016 KEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQ
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB9 VSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVLMWMGMT
.:. : ::::::.::::...::::::.::::.:: ::::.:...:::::: ::: :::.
XP_016 ASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMA
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB9 FGLESGSCSAEDLKMARNLVPKALEPYVTEMAQGTFGGVF-TTAGSRSNGTWLSASDLTN
::::::::::::::::.::::::::::::::::: :::: ::::: :::: .:::::::
XP_016 CGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFSASDLTN
220 230 240 250 260 270
370 380 390 400
pF1KB9 IAIGMLATSSGGSQYSGSRVETPAVEEEEEEDNNDDDLSENDEDD
: :::::::.:::::::::::: : :.:..:::..::::::
XP_016 GADGMLATSSNGSQYSGSRVETP-VSYVGEDDEEDDDFNENDEDD
280 290 300 310
405 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:33:37 2016 done: Fri Nov 4 17:33:38 2016
Total Scan time: 8.810 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]