Result of FASTA (omim) for
pF1KB9585
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9585, 345 aa
1>>>pF1KB9585 345 - 345 aa - 345 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.0787+/-0.00035; mu= -0.4224+/- 0.022
mean_var=412.8368+/-84.660, 0's: 0 Z-trim(126.4): 14 B-trim: 1025 in 1/60
Lambda= 0.063123
statistics sampled from 52337 (52355) to 52337 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.847), E-opt: 0.2 (0.614), width: 16
Scan time: 8.950
The best scores are: opt bits E(85289)
NP_005185 (OMIM: 189965) CCAAT/enhancer-binding pr ( 345) 2394 231.1 2.8e-60
NP_001272807 (OMIM: 189965) CCAAT/enhancer-binding ( 322) 2213 214.6 2.4e-55
NP_001272808 (OMIM: 189965) CCAAT/enhancer-binding ( 147) 949 99.0 6.6e-21
NP_001272758 (OMIM: 116897,601626) CCAAT/enhancer- ( 239) 462 55.0 2e-07
NP_001274364 (OMIM: 116897,601626) CCAAT/enhancer- ( 344) 462 55.1 2.5e-07
NP_004355 (OMIM: 116897,601626) CCAAT/enhancer-bin ( 358) 462 55.2 2.6e-07
NP_001274353 (OMIM: 116897,601626) CCAAT/enhancer- ( 393) 462 55.2 2.8e-07
NP_001796 (OMIM: 245480,600749) CCAAT/enhancer-bin ( 281) 438 52.9 1e-06
NP_005186 (OMIM: 116898) CCAAT/enhancer-binding pr ( 269) 388 48.3 2.3e-05
>>NP_005185 (OMIM: 189965) CCAAT/enhancer-binding protei (345 aa)
initn: 2394 init1: 2394 opt: 2394 Z-score: 1203.3 bits: 231.1 E(85289): 2.8e-60
Smith-Waterman score: 2394; 100.0% identity (100.0% similar) in 345 aa overlap (1-345:1-345)
10 20 30 40 50 60
pF1KB9 MQRLVAWDPACLPLPPPPPAFKSMEVANFYYEADCLAAAYGGKAAPAAPPAARPGPRPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MQRLVAWDPACLPLPPPPPAFKSMEVANFYYEADCLAAAYGGKAAPAAPPAARPGPRPPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GELGSIGDHERAIDFSPYLEPLGAPQAPAPATATDTFEAAPPAPAPAPASSGQHHDFLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GELGSIGDHERAIDFSPYLEPLGAPQAPAPATATDTFEAAPPAPAPAPASSGQHHDFLSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LFSDDYGGKNCKKPAEYGYVSLGRLGAAKGALHPGCFAPLHPPPPPPPPPAELKAEPGFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LFSDDYGGKNCKKPAEYGYVSLGRLGAAKGALHPGCFAPLHPPPPPPPPPAELKAEPGFE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PADCKRKEEAGAPGGGAGMAAGFPYALRAYLGYQAVPSGSSGSLSTSSSSSPPGTPSPAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PADCKRKEEAGAPGGGAGMAAGFPYALRAYLGYQAVPSGSSGSLSTSSSSSPPGTPSPAD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 AKAPPTACYAGAAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 AKAPPTACYAGAAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQ
250 260 270 280 290 300
310 320 330 340
pF1KB9 HKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSGHC
:::::::::::::::::::::::::::::::::::::::::::::
NP_005 HKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSGHC
310 320 330 340
>>NP_001272807 (OMIM: 189965) CCAAT/enhancer-binding pro (322 aa)
initn: 2213 init1: 2213 opt: 2213 Z-score: 1114.5 bits: 214.6 E(85289): 2.4e-55
Smith-Waterman score: 2213; 100.0% identity (100.0% similar) in 322 aa overlap (24-345:1-322)
10 20 30 40 50 60
pF1KB9 MQRLVAWDPACLPLPPPPPAFKSMEVANFYYEADCLAAAYGGKAAPAAPPAARPGPRPPA
:::::::::::::::::::::::::::::::::::::
NP_001 MEVANFYYEADCLAAAYGGKAAPAAPPAARPGPRPPA
10 20 30
70 80 90 100 110 120
pF1KB9 GELGSIGDHERAIDFSPYLEPLGAPQAPAPATATDTFEAAPPAPAPAPASSGQHHDFLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GELGSIGDHERAIDFSPYLEPLGAPQAPAPATATDTFEAAPPAPAPAPASSGQHHDFLSD
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB9 LFSDDYGGKNCKKPAEYGYVSLGRLGAAKGALHPGCFAPLHPPPPPPPPPAELKAEPGFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFSDDYGGKNCKKPAEYGYVSLGRLGAAKGALHPGCFAPLHPPPPPPPPPAELKAEPGFE
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB9 PADCKRKEEAGAPGGGAGMAAGFPYALRAYLGYQAVPSGSSGSLSTSSSSSPPGTPSPAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PADCKRKEEAGAPGGGAGMAAGFPYALRAYLGYQAVPSGSSGSLSTSSSSSPPGTPSPAD
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB9 AKAPPTACYAGAAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKAPPTACYAGAAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQ
220 230 240 250 260 270
310 320 330 340
pF1KB9 HKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSGHC
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 HKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSGHC
280 290 300 310 320
>>NP_001272808 (OMIM: 189965) CCAAT/enhancer-binding pro (147 aa)
initn: 949 init1: 949 opt: 949 Z-score: 496.3 bits: 99.0 E(85289): 6.6e-21
Smith-Waterman score: 949; 100.0% identity (100.0% similar) in 147 aa overlap (199-345:1-147)
170 180 190 200 210 220
pF1KB9 PPAELKAEPGFEPADCKRKEEAGAPGGGAGMAAGFPYALRAYLGYQAVPSGSSGSLSTSS
::::::::::::::::::::::::::::::
NP_001 MAAGFPYALRAYLGYQAVPSGSSGSLSTSS
10 20 30
230 240 250 260 270 280
pF1KB9 SSSPPGTPSPADAKAPPTACYAGAAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSSPPGTPSPADAKAPPTACYAGAAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKS
40 50 60 70 80 90
290 300 310 320 330 340
pF1KB9 RDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSGHC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSGHC
100 110 120 130 140
>>NP_001272758 (OMIM: 116897,601626) CCAAT/enhancer-bind (239 aa)
initn: 554 init1: 385 opt: 462 Z-score: 254.2 bits: 55.0 E(85289): 2e-07
Smith-Waterman score: 471; 45.2% identity (62.5% similar) in 208 aa overlap (148-345:51-238)
120 130 140 150 160 170
pF1KB9 LSDLFSDDYGGKNCKKPAEYGYVSLGRLGAAKGALHPGCFAPLHPPPPPPP-------PP
:: : : : .::::::: ::
NP_001 DGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLF-PYQPPPPPPPSHPHPHPPP
30 40 50 60 70
180 190 200 210 220
pF1KB9 AELKAEP-GFEPADCKRKEEAGAPGGGAGMAAGFPYALRA-YLGYQAVPSGSSGSLSTSS
:.: : :. : : . :: . . : : :: ..:.
NP_001 AHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTPVPSPHPAPALGAAGLPG----------
80 90 100 110 120
230 240 250 260 270 280
pF1KB9 SSSPPGTPSPADAKAPPTACYAGAAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKS
::. . . : : .:.. : .::::.:::.:.::..::::::::::::
NP_001 ----PGSALKGLGAAHPDLRASGGSGA-----GKAKKSVDKNSNEYRVRRERNNIAVRKS
130 140 150 160 170 180
290 300 310 320 330 340
pF1KB9 RDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEP-LLASSGHC
:::::.::.:::.::::::..:.::.:.::::::::.:::..:.:::: :. . :.:
NP_001 RDKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCA
190 200 210 220 230
>>NP_001274364 (OMIM: 116897,601626) CCAAT/enhancer-bind (344 aa)
initn: 571 init1: 385 opt: 462 Z-score: 252.4 bits: 55.1 E(85289): 2.5e-07
Smith-Waterman score: 529; 37.3% identity (54.6% similar) in 359 aa overlap (37-345:14-343)
10 20 30 40 50 60
pF1KB9 WDPACLPLPPPPPAFKSMEVANFYYEADCLAAAYGGK--AAPAAPPAARPGPRPPAGELG
.::.: :.:: ::: .:.: ::
NP_001 MSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEP----LG
10 20 30
70 80 90 100 110
pF1KB9 SIGDHERAIDFSPYLEPLGAPQAPAPATATDTF------EAAPPAPAPAPASSGQHHDFL
.: .:: .::.: :..: : .: : : : : .:. ...: :.
NP_001 GICEHETSIDISAYIDP----AAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYP
40 50 60 70 80 90
120 130 140 150
pF1KB9 SDLFSDDY----GGKNCKKP----AEYGYVSLGRLG-----AAKGALHP-----------
. . :: . : : ::.. ::: .. ::.:
NP_001 GAPAGPGGAVMPGGAHGPPPGYGCAAAGYLD-GRLEPLYERVGAPALRPLVIKQEPREED
100 110 120 130 140 150
160 170 180 190
pF1KB9 --------GCFAPLHPPPPPPP-------PPAELKAEP-GFEPADCKRKEEAGAPGGGAG
: : : .::::::: :::.: : :. : : . :: .
NP_001 EAKQLALAGLF-PYQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTP
160 170 180 190 200 210
200 210 220 230 240 250
pF1KB9 MAAGFPYALRA-YLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAKAPPTACYAGAAPAPS
. : : :: ..:. ::. . . : : .:.. :
NP_001 PPTPVPSPHPAPALGAAGLPG--------------PGSALKGLGAAHPDLRASGGSGA--
220 230 240 250
260 270 280 290 300 310
pF1KB9 QVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKV
.::::.:::.:.::..:::::::::::::::::.::.:::.::::::..:.::.:.:
NP_001 ---GKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRV
260 270 280 290 300 310
320 330 340
pF1KB9 EQLSRELSTLRNLFKQLPEP-LLASSGHC
:::::::.:::..:.:::: :. . :.:
NP_001 EQLSRELDTLRGIFRQLPESSLVKAMGNCA
320 330 340
>>NP_004355 (OMIM: 116897,601626) CCAAT/enhancer-binding (358 aa)
initn: 571 init1: 385 opt: 462 Z-score: 252.2 bits: 55.2 E(85289): 2.6e-07
Smith-Waterman score: 530; 36.3% identity (53.4% similar) in 380 aa overlap (16-345:11-357)
10 20 30 40 50 60
pF1KB9 MQRLVAWDPACLPLPPPPPAFKSMEVANFYYEADCLAAAYGGKAAPAAPPAARPGPRPPA
: :: : .. . . . : .. :.:: ::: .:.:
NP_004 MESADFYEAEPRPPM--SSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEP--
10 20 30 40 50
70 80 90 100 110
pF1KB9 GELGSIGDHERAIDFSPYLEPLGAPQAPAPATATDTF------EAAPPAPAPAPASSGQH
::.: .:: .::.: :..: : .: : : : : .:. ...:
NP_004 --LGGICEHETSIDISAYIDP----AAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGD
60 70 80 90 100
120 130 140 150
pF1KB9 HDFLSDLFSDDY----GGKNCKKP----AEYGYVSLGRL-------GAAKGALHP-----
:. . . :: . : : ::.. ::: :: ::.:
NP_004 FDYPGAPAGPGGAVMPGGAHGPPPGYGCAAAGYLD-GRLEPLYERVGAP--ALRPLVIKQ
110 120 130 140 150 160
160 170 180 190
pF1KB9 --------------GCFAPLHPPPPPPP-------PPAELKAEP-GFEPADCKRKEEAGA
: : : .::::::: :::.: : :. : : .
NP_004 EPREEDEAKQLALAGLF-PYQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQ
170 180 190 200 210 220
200 210 220 230 240 250
pF1KB9 PGGGAGMAAGFPYALRA-YLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAKAPPTACYAG
:: . . : : :: ..:. ::. . . : : .:
NP_004 PGHPTPPPTPVPSPHPAPALGAAGLPG--------------PGSALKGLGAAHPDLRASG
230 240 250 260
260 270 280 290 300 310
pF1KB9 AAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENE
.. : .::::.:::.:.::..:::::::::::::::::.::.:::.::::::..:.
NP_004 GSGA-----GKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDND
270 280 290 300 310 320
320 330 340
pF1KB9 RLQKKVEQLSRELSTLRNLFKQLPEP-LLASSGHC
::.:.::::::::.:::..:.:::: :. . :.:
NP_004 RLRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCA
330 340 350
>>NP_001274353 (OMIM: 116897,601626) CCAAT/enhancer-bind (393 aa)
initn: 571 init1: 385 opt: 462 Z-score: 251.8 bits: 55.2 E(85289): 2.8e-07
Smith-Waterman score: 530; 36.3% identity (53.4% similar) in 380 aa overlap (16-345:46-392)
10 20 30 40
pF1KB9 MQRLVAWDPACLPLPPPPPAFKSMEVANFYYEADCLAAAYGGKAA
: :: : .. . . . : .. :.
NP_001 RPAQAGGRRGSPCRENSNSPMESADFYEAEPRPPM--SSHLQSPPHAPSSAAFGFPRGAG
20 30 40 50 60 70
50 60 70 80 90
pF1KB9 PAAPPAARPGPRPPAGELGSIGDHERAIDFSPYLEPLGAPQAPAPATATDTF------EA
:: ::: .:.: ::.: .:: .::.: :..: : .: : :
NP_001 PAQPPAPPAAPEP----LGGICEHETSIDISAYIDP----AAFNDEFLADLFQHSRQQEK
80 90 100 110 120
100 110 120 130 140
pF1KB9 APPAPAPAPASSGQHHDFLSDLFSDDY----GGKNCKKP----AEYGYVSLGRL------
: : .:. ...: :. . . :: . : : ::.. :::
NP_001 AKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPGGAHGPPPGYGCAAAGYLD-GRLEPLYER
130 140 150 160 170 180
150 160 170
pF1KB9 -GAAKGALHP-------------------GCFAPLHPPPPPPP-------PPAELKAEP-
:: ::.: : : : .::::::: :::.: :
NP_001 VGAP--ALRPLVIKQEPREEDEAKQLALAGLF-PYQPPPPPPPSHPHPHPPPAHLAAPHL
190 200 210 220 230 240
180 190 200 210 220 230
pF1KB9 GFEPADCKRKEEAGAPGGGAGMAAGFPYALRA-YLGYQAVPSGSSGSLSTSSSSSPPGTP
:. : : . :: . . : : :: ..:. ::.
NP_001 QFQIAHCGQTTMHLQPGHPTPPPTPVPSPHPAPALGAAGLPG--------------PGSA
250 260 270 280
240 250 260 270 280 290
pF1KB9 SPADAKAPPTACYAGAAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRN
. . : : .:.. : .::::.:::.:.::..:::::::::::::::::.::
NP_001 LKGLGAAHPDLRASGGSGA-----GKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRN
290 300 310 320 330 340
300 310 320 330 340
pF1KB9 LETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEP-LLASSGHC
.:::.::::::..:.::.:.::::::::.:::..:.:::: :. . :.:
NP_001 VETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCA
350 360 370 380 390
>>NP_001796 (OMIM: 245480,600749) CCAAT/enhancer-binding (281 aa)
initn: 464 init1: 362 opt: 438 Z-score: 241.6 bits: 52.9 E(85289): 1e-06
Smith-Waterman score: 482; 37.0% identity (54.6% similar) in 324 aa overlap (30-345:6-280)
10 20 30 40 50 60
pF1KB9 MQRLVAWDPACLPLPPPPPAFKSMEVANFYYEADCLAAAYGGKAAPAAPPAARPGPRPPA
::: : ::. : ..: ::
NP_001 MSHGTYYE--C--EPRGGQQ-PLEFSGGRAGP----
10 20
70 80 90 100 110 120
pF1KB9 GELGSIGDHERAIDFSPYLEPLGAPQAPAPATATDTFEAAPPAPAPAPASSGQHHDFLSD
::::.. .:: .::.: :.: : : .: : :. ::: : . .: .
NP_001 GELGDMCEHEASIDLSAYIES-GEEQ-----LLSDLF-AVKPAPE-ARGLKGPGTPAFPH
30 40 50 60 70
130 140 150 160 170
pF1KB9 LFSDDYGGKNCKKPAEYGYVSLGRLGAAKGALHPGCFAPLHPPPPPPPPPAELKAEPG-F
. : : ..: .: . :: :: .. :: .
NP_001 YLPPD--------PRPFAYPP-HTFGPDRKALGPGIYSS-----------------PGSY
80 90 100 110
180 190 200 210 220 230
pF1KB9 EPADCKRKEEAGAPGGGAGMAAGFPYALRAYLGYQAVPSGSSGSLSTSSSSSPPGTP---
.: ::: .: :. . . : :. ::.. :.. .. . . :: :
NP_001 DPRAVAVKEEPRGPEGSRAASRGSYNPLQ----YQVAHCGQT-AMHLPPTLAAPGQPLRV
120 130 140 150 160
240 250 260 270 280 290
pF1KB9 --SPADAKAPPTACYAGAAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKM
.: . ::: . ::.:. :.::.:.: : ::..:::::::::::::::::
NP_001 LKAPLATAAPPCSPLL-KAPSPAGPLHKGKKAVNKDSLEYRLRRERNNIAVRKSRDKAKR
170 180 190 200 210 220
300 310 320 330 340
pF1KB9 RNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEP--LLASSGHC
: ::::.:::: ::::::...::::..::.::::::.:.:: :. . : :
NP_001 RILETQQKVLEYMAENERLRSRVEQLTQELDTLRNLFRQIPEAANLIKGVGGCS
230 240 250 260 270 280
>>NP_005186 (OMIM: 116898) CCAAT/enhancer-binding protei (269 aa)
initn: 422 init1: 349 opt: 388 Z-score: 217.2 bits: 48.3 E(85289): 2.3e-05
Smith-Waterman score: 466; 36.5% identity (56.5% similar) in 315 aa overlap (36-343:1-264)
10 20 30 40 50 60
pF1KB9 AWDPACLPLPPPPPAFKSMEVANFYYEADCLAAAYGGKAAPA--APPAARPGPRPPAGEL
..:: . .:: :: :.:.: :.
NP_005 MSAALFSLDGPARGAPWPAEPAPFYEPGRA
10 20 30
70 80 90 100 110
pF1KB9 GSIGDHERAIDFSPYLEPLGAPQAPAPATATDT----FEAAPPAPAPAPASSGQHHDFLS
:. : :. . : :: : : ::: : : : . : .:. : ....
NP_005 GKPG---RGAE--P--GALGEPGAAAPAMYDDESAIDFSAYIDSMAAVPTLELCHDELFA
40 50 60 70 80
120 130 140 150 160 170
pF1KB9 DLFSDDYGGKNCKKPAEYGYVSLGRLGAAKGALHPGCFAPLHPPPPPPPPPAELKAEPGF
:::.... . : ::. : :: .: .: : : : :: :: .
NP_005 DLFNSNH---------KAG-------GAGPLELLPG--GPARPLGPGPAAPRLLKREPDW
90 100 110 120
180 190 200 210 220 230
pF1KB9 EPADCKRKEEAGAPGGGAGMAAGFPYALRAYLGYQAVPSGSSGSLSTSSSSSPPGTPSPA
.: ::: . .: . : :.: : :..... .:: .: :
NP_005 GDGD--------APG------SLLPAQVAACA--QTVVS-----LAAAGQPTPPTSPEP-
130 140 150 160
240 250 260 270 280 290
pF1KB9 DAKAPPTACYAGAAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLET
: .. ::.:.. :: .:. :. : ::. ::::::::::::::::: :: :
NP_005 ----PRSSPRQTPAPGPAREKSAGKRGPDRGSPEYRQRRERNNIAVRKSRDKAKRRNQEM
170 180 190 200 210
300 310 320 330 340
pF1KB9 QHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEP-LLASSGHC
:.:..::.::::.:...::::.:.:. ::..::::: : .: ..:
NP_005 QQKLVELSAENEKLHQRVEQLTRDLAGLRQFFKQLPSPPFLPAAGTADCR
220 230 240 250 260
345 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:30:17 2016 done: Fri Nov 4 17:30:18 2016
Total Scan time: 8.950 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]