Result of FASTA (omim) for
pF1KB9540
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9540, 351 aa
1>>>pF1KB9540 351 - 351 aa - 351 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.0129+/-0.00033; mu= 6.7718+/- 0.021
mean_var=180.4645+/-35.909, 0's: 0 Z-trim(121.5): 14 B-trim: 1958 in 1/55
Lambda= 0.095473
statistics sampled from 38119 (38134) to 38119 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.783), E-opt: 0.2 (0.447), width: 16
Scan time: 9.880
The best scores are: opt bits E(85289)
NP_001666 (OMIM: 604064) cyclic AMP-dependent tran ( 351) 2337 333.4 4.6e-91
XP_016884296 (OMIM: 604064) PREDICTED: cyclic AMP- ( 351) 2337 333.4 4.6e-91
NP_877962 (OMIM: 604064) cyclic AMP-dependent tran ( 351) 2337 333.4 4.6e-91
NP_036200 (OMIM: 606398) cyclic AMP-dependent tran ( 282) 307 53.7 5.7e-07
NP_001180575 (OMIM: 606398) cyclic AMP-dependent t ( 282) 307 53.7 5.7e-07
XP_011524931 (OMIM: 606398) PREDICTED: cyclic AMP- ( 282) 307 53.7 5.7e-07
NP_001277675 (OMIM: 606398) cyclic AMP-dependent t ( 282) 307 53.7 5.7e-07
>>NP_001666 (OMIM: 604064) cyclic AMP-dependent transcri (351 aa)
initn: 2337 init1: 2337 opt: 2337 Z-score: 1755.9 bits: 333.4 E(85289): 4.6e-91
Smith-Waterman score: 2337; 100.0% identity (100.0% similar) in 351 aa overlap (1-351:1-351)
10 20 30 40 50 60
pF1KB9 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR
250 260 270 280 290 300
310 320 330 340 350
pF1KB9 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
310 320 330 340 350
>>XP_016884296 (OMIM: 604064) PREDICTED: cyclic AMP-depe (351 aa)
initn: 2337 init1: 2337 opt: 2337 Z-score: 1755.9 bits: 333.4 E(85289): 4.6e-91
Smith-Waterman score: 2337; 100.0% identity (100.0% similar) in 351 aa overlap (1-351:1-351)
10 20 30 40 50 60
pF1KB9 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR
250 260 270 280 290 300
310 320 330 340 350
pF1KB9 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
310 320 330 340 350
>>NP_877962 (OMIM: 604064) cyclic AMP-dependent transcri (351 aa)
initn: 2337 init1: 2337 opt: 2337 Z-score: 1755.9 bits: 333.4 E(85289): 4.6e-91
Smith-Waterman score: 2337; 100.0% identity (100.0% similar) in 351 aa overlap (1-351:1-351)
10 20 30 40 50 60
pF1KB9 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_877 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_877 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_877 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_877 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_877 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR
250 260 270 280 290 300
310 320 330 340 350
pF1KB9 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_877 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
310 320 330 340 350
>>NP_036200 (OMIM: 606398) cyclic AMP-dependent transcri (282 aa)
initn: 334 init1: 273 opt: 307 Z-score: 246.1 bits: 53.7 E(85289): 5.7e-07
Smith-Waterman score: 336; 33.2% identity (51.5% similar) in 340 aa overlap (12-348:3-278)
10 20 30 40 50 60
pF1KB9 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
:.. : .:.. : : .:: : :: .. : .. .. .:. :
NP_036 MSLLATLGLELDRALLPAS-GLGWLVDYGKLPP--APAPLAPYEVLGGALE
10 20 30 40
70 80 90 100 110 120
pF1KB9 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
:: .. :.:: ::: :..: . ::: .. .: : . :
NP_036 ----GGLPVGGEPLAGDGFS--DWMTERVD-----FTALLPLE--PPLPPGTLPQPSPTP
50 60 70 80 90
130 140 150 160 170
pF1KB9 -DL--FAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHS
:: .: :... .: . :: .: . : ::: .:.. : : :
NP_036 PDLEAMASLLKKELEQMEDFFLDAPPLPPP--SPPPLPP----PPLPPAPSLPLSLP--S
100 110 120 130 140
180 190 200 210 220 230
pF1KB9 FSLELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPS
:.: .: : : : .: .... : : : : ::. :
NP_036 FDLPQPPVLDTL------DLLAIY-----CRNEA---GQEEVG--MPP---LPPPQQPPP
150 160 170 180
240 250 260 270 280 290
pF1KB9 TRGSPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQ
:: :.: .: :: : : ..: :.: :: .:::.:: ::::
NP_036 P--SP----PQP------SRLAPYPHP------ATTRG---DRKQKKRDQNKSAALRYRQ
190 200 210 220
300 310 320 330 340 350
pF1KB9 KKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
.:::: ::: :::. :: .:. :::::.:. .::::.:::. :: :::...
NP_036 RKRAEGEALEGECQGLEARNRELKERAESVEREIQYVKDLLIEVYKARSQRTRSC
230 240 250 260 270 280
>>NP_001180575 (OMIM: 606398) cyclic AMP-dependent trans (282 aa)
initn: 334 init1: 273 opt: 307 Z-score: 246.1 bits: 53.7 E(85289): 5.7e-07
Smith-Waterman score: 336; 33.2% identity (51.5% similar) in 340 aa overlap (12-348:3-278)
10 20 30 40 50 60
pF1KB9 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
:.. : .:.. : : .:: : :: .. : .. .. .:. :
NP_001 MSLLATLGLELDRALLPAS-GLGWLVDYGKLPP--APAPLAPYEVLGGALE
10 20 30 40
70 80 90 100 110 120
pF1KB9 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
:: .. :.:: ::: :..: . ::: .. .: : . :
NP_001 ----GGLPVGGEPLAGDGFS--DWMTERVD-----FTALLPLE--PPLPPGTLPQPSPTP
50 60 70 80 90
130 140 150 160 170
pF1KB9 -DL--FAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHS
:: .: :... .: . :: .: . : ::: .:.. : : :
NP_001 PDLEAMASLLKKELEQMEDFFLDAPPLPPP--SPPPLPP----PPLPPAPSLPLSLP--S
100 110 120 130 140
180 190 200 210 220 230
pF1KB9 FSLELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPS
:.: .: : : : .: .... : : : : ::. :
NP_001 FDLPQPPVLDTL------DLLAIY-----CRNEA---GQEEVG--MPP---LPPPQQPPP
150 160 170 180
240 250 260 270 280 290
pF1KB9 TRGSPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQ
:: :.: .: :: : : ..: :.: :: .:::.:: ::::
NP_001 P--SP----PQP------SRLAPYPHP------ATTRG---DRKQKKRDQNKSAALRYRQ
190 200 210 220
300 310 320 330 340 350
pF1KB9 KKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
.:::: ::: :::. :: .:. :::::.:. .::::.:::. :: :::...
NP_001 RKRAEGEALEGECQGLEARNRELKERAESVEREIQYVKDLLIEVYKARSQRTRSC
230 240 250 260 270 280
>>XP_011524931 (OMIM: 606398) PREDICTED: cyclic AMP-depe (282 aa)
initn: 334 init1: 273 opt: 307 Z-score: 246.1 bits: 53.7 E(85289): 5.7e-07
Smith-Waterman score: 336; 33.2% identity (51.5% similar) in 340 aa overlap (12-348:3-278)
10 20 30 40 50 60
pF1KB9 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
:.. : .:.. : : .:: : :: .. : .. .. .:. :
XP_011 MSLLATLGLELDRALLPAS-GLGWLVDYGKLPP--APAPLAPYEVLGGALE
10 20 30 40
70 80 90 100 110 120
pF1KB9 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
:: .. :.:: ::: :..: . ::: .. .: : . :
XP_011 ----GGLPVGGEPLAGDGFS--DWMTERVD-----FTALLPLE--PPLPPGTLPQPSPTP
50 60 70 80 90
130 140 150 160 170
pF1KB9 -DL--FAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHS
:: .: :... .: . :: .: . : ::: .:.. : : :
XP_011 PDLEAMASLLKKELEQMEDFFLDAPPLPPP--SPPPLPP----PPLPPAPSLPLSLP--S
100 110 120 130 140
180 190 200 210 220 230
pF1KB9 FSLELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPS
:.: .: : : : .: .... : : : : ::. :
XP_011 FDLPQPPVLDTL------DLLAIY-----CRNEA---GQEEVG--MPP---LPPPQQPPP
150 160 170 180
240 250 260 270 280 290
pF1KB9 TRGSPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQ
:: :.: .: :: : : ..: :.: :: .:::.:: ::::
XP_011 P--SP----PQP------SRLAPYPHP------ATTRG---DRKQKKRDQNKSAALRYRQ
190 200 210 220
300 310 320 330 340 350
pF1KB9 KKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
.:::: ::: :::. :: .:. :::::.:. .::::.:::. :: :::...
XP_011 RKRAEGEALEGECQGLEARNRELKERAESVEREIQYVKDLLIEVYKARSQRTRSC
230 240 250 260 270 280
>>NP_001277675 (OMIM: 606398) cyclic AMP-dependent trans (282 aa)
initn: 334 init1: 273 opt: 307 Z-score: 246.1 bits: 53.7 E(85289): 5.7e-07
Smith-Waterman score: 336; 33.2% identity (51.5% similar) in 340 aa overlap (12-348:3-278)
10 20 30 40 50 60
pF1KB9 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
:.. : .:.. : : .:: : :: .. : .. .. .:. :
NP_001 MSLLATLGLELDRALLPAS-GLGWLVDYGKLPP--APAPLAPYEVLGGALE
10 20 30 40
70 80 90 100 110 120
pF1KB9 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
:: .. :.:: ::: :..: . ::: .. .: : . :
NP_001 ----GGLPVGGEPLAGDGFS--DWMTERVD-----FTALLPLE--PPLPPGTLPQPSPTP
50 60 70 80 90
130 140 150 160 170
pF1KB9 -DL--FAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHS
:: .: :... .: . :: .: . : ::: .:.. : : :
NP_001 PDLEAMASLLKKELEQMEDFFLDAPPLPPP--SPPPLPP----PPLPPAPSLPLSLP--S
100 110 120 130 140
180 190 200 210 220 230
pF1KB9 FSLELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPS
:.: .: : : : .: .... : : : : ::. :
NP_001 FDLPQPPVLDTL------DLLAIY-----CRNEA---GQEEVG--MPP---LPPPQQPPP
150 160 170 180
240 250 260 270 280 290
pF1KB9 TRGSPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQ
:: :.: .: :: : : ..: :.: :: .:::.:: ::::
NP_001 P--SP----PQP------SRLAPYPHP------ATTRG---DRKQKKRDQNKSAALRYRQ
190 200 210 220
300 310 320 330 340 350
pF1KB9 KKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
.:::: ::: :::. :: .:. :::::.:. .::::.:::. :: :::...
NP_001 RKRAEGEALEGECQGLEARNRELKERAESVEREIQYVKDLLIEVYKARSQRTRSC
230 240 250 260 270 280
351 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:03:52 2016 done: Sat Nov 5 02:03:53 2016
Total Scan time: 9.880 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]