Result of FASTA (ccds) for
pF1KB9509
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9509, 360 aa
1>>>pF1KB9509 360 - 360 aa - 360 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5173+/-0.00131; mu= 7.2376+/- 0.079
mean_var=160.7372+/-33.070, 0's: 0 Z-trim(105.2): 135 B-trim: 4 in 1/49
Lambda= 0.101162
statistics sampled from 8138 (8274) to 8138 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.595), E-opt: 0.2 (0.254), width: 16
Scan time: 2.800
The best scores are: opt bits E(32554)
CCDS2546.1 PPP1R7 gene_id:5510|Hs108|chr2 ( 360) 2266 343.0 2.4e-94
CCDS63194.1 PPP1R7 gene_id:5510|Hs108|chr2 ( 317) 1899 289.4 2.9e-78
CCDS63192.1 PPP1R7 gene_id:5510|Hs108|chr2 ( 280) 1702 260.6 1.2e-69
CCDS63193.1 PPP1R7 gene_id:5510|Hs108|chr2 ( 237) 1335 207.0 1.4e-53
CCDS63190.1 PPP1R7 gene_id:5510|Hs108|chr2 ( 221) 1315 204.0 9.9e-53
CCDS58376.1 LRRC49 gene_id:54839|Hs108|chr15 ( 691) 379 67.8 3.1e-11
CCDS55971.1 LRRC49 gene_id:54839|Hs108|chr15 ( 642) 372 66.8 6e-11
CCDS61694.1 LRRC49 gene_id:54839|Hs108|chr15 ( 676) 372 66.8 6.2e-11
CCDS32282.1 LRRC49 gene_id:54839|Hs108|chr15 ( 686) 372 66.8 6.3e-11
>>CCDS2546.1 PPP1R7 gene_id:5510|Hs108|chr2 (360 aa)
initn: 2266 init1: 2266 opt: 2266 Z-score: 1807.4 bits: 343.0 E(32554): 2.4e-94
Smith-Waterman score: 2266; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360)
10 20 30 40 50 60
pF1KB9 MAAERGAGQQQSQEMMEVDRRVESEESGDEEGKKHSSGIVADLSEQSLKDGEERGEEDPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 MAAERGAGQQQSQEMMEVDRRVESEESGDEEGKKHSSGIVADLSEQSLKDGEERGEEDPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 EEHELPVDMETINLDRDAEDVDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 EEHELPVDMETINLDRDAEDVDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 SLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 NLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 NLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 RLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 RLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 FWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFVRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS25 FWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFVRF
310 320 330 340 350 360
>>CCDS63194.1 PPP1R7 gene_id:5510|Hs108|chr2 (317 aa)
initn: 1885 init1: 1885 opt: 1899 Z-score: 1518.7 bits: 289.4 E(32554): 2.9e-78
Smith-Waterman score: 1899; 97.7% identity (99.4% similar) in 310 aa overlap (51-360:8-317)
30 40 50 60 70 80
pF1KB9 RVESEESGDEEGKKHSSGIVADLSEQSLKDGEERGEEDPEEEHELPVDMETINLDRDAED
:.....: :::::::::::::::::::::
CCDS63 MAAERGAGQQQSQEMMEEEHELPVDMETINLDRDAED
10 20 30
90 100 110 120 130 140
pF1KB9 VDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 VDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEA
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB9 LTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRA
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB9 IENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 IENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLS
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB9 HNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 HNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGA
220 230 240 250 260 270
330 340 350 360
pF1KB9 RSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFVRF
::::::::::::::::::::::::::::::::::::::::
CCDS63 RSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFVRF
280 290 300 310
>>CCDS63192.1 PPP1R7 gene_id:5510|Hs108|chr2 (280 aa)
initn: 1702 init1: 1702 opt: 1702 Z-score: 1364.0 bits: 260.6 E(32554): 1.2e-69
Smith-Waterman score: 1702; 100.0% identity (100.0% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB9 MAAERGAGQQQSQEMMEVDRRVESEESGDEEGKKHSSGIVADLSEQSLKDGEERGEEDPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 MAAERGAGQQQSQEMMEVDRRVESEESGDEEGKKHSSGIVADLSEQSLKDGEERGEEDPE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 EEHELPVDMETINLDRDAEDVDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 EEHELPVDMETINLDRDAEDVDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 NLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 NLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 RLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQE
:::::::::::::::::::::::::::::::::
CCDS63 RLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNVQDSLTY
250 260 270 280
310 320 330 340 350 360
pF1KB9 FWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFVRF
>>CCDS63193.1 PPP1R7 gene_id:5510|Hs108|chr2 (237 aa)
initn: 1321 init1: 1321 opt: 1335 Z-score: 1075.5 bits: 207.0 E(32554): 1.4e-53
Smith-Waterman score: 1335; 96.9% identity (99.1% similar) in 223 aa overlap (51-273:8-230)
30 40 50 60 70 80
pF1KB9 RVESEESGDEEGKKHSSGIVADLSEQSLKDGEERGEEDPEEEHELPVDMETINLDRDAED
:.....: :::::::::::::::::::::
CCDS63 MAAERGAGQQQSQEMMEEEHELPVDMETINLDRDAED
10 20 30
90 100 110 120 130 140
pF1KB9 VDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 VDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEA
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB9 LTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRA
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB9 IENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 IENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLS
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB9 HNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGA
:::::::::::::
CCDS63 HNGIEVIEGLENNVQDSLTY
220 230
>>CCDS63190.1 PPP1R7 gene_id:5510|Hs108|chr2 (221 aa)
initn: 1315 init1: 1315 opt: 1315 Z-score: 1060.2 bits: 204.0 E(32554): 9.9e-53
Smith-Waterman score: 1315; 100.0% identity (100.0% similar) in 213 aa overlap (61-273:2-214)
40 50 60 70 80 90
pF1KB9 EGKKHSSGIVADLSEQSLKDGEERGEEDPEEEHELPVDMETINLDRDAEDVDLNHYRIGK
::::::::::::::::::::::::::::::
CCDS63 MEEHELPVDMETINLDRDAEDVDLNHYRIGK
10 20 30
100 110 120 130 140 150
pF1KB9 IEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 IEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDIS
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB9 FNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 FNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNL
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB9 ESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 ESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGL
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB9 ENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLER
:::
CCDS63 ENNVQDSLTY
220
>>CCDS58376.1 LRRC49 gene_id:54839|Hs108|chr15 (691 aa)
initn: 605 init1: 334 opt: 379 Z-score: 315.1 bits: 67.8 E(32554): 3.1e-11
Smith-Waterman score: 379; 31.2% identity (69.5% similar) in 282 aa overlap (84-354:34-307)
60 70 80 90 100 110
pF1KB9 RGEEDPEEEHELPVDMETINLDRDAEDVDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCI
:. :. :.: :.. : .... : :..
CCDS58 GKYRSVSGRAANNVNCGLHLVIQTSSLPEKNKVRFKKVE-FKLNKDTSSFPGR--LLQ--
10 20 30 40 50
120 130 140 150 160
pF1KB9 ENLEELQSLRELD---LYDNQIKKIENLEALTELEIL-DISFNLLRN-------IEGVDK
..::. : :. : : ....... :. .: .:: . ..: :. :.: :.
CCDS58 HDLERNYSSRQGDHINLVSSSLSSFPILQRSSEEKILYSDRLSLERQKLTVCPIINGEDH
60 70 80 90 100 110
170 180 190 200 210 220
pF1KB9 LTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITK
: :: : . .: :..:.:.:::..: :.: .:.:. : ...:: :. :.::::.: :
CCDS58 L-RL--LNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKK
120 130 140 150 160 170
230 240 250 260 270 280
pF1KB9 LQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIA
..::. : .: ::....:..::::....: .:: : :..: . ...:.. ..:: :..
CCDS58 ISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLR
180 190 200 210 220 230
290 300 310 320 330 340
pF1KB9 SNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRK
:.: ......: ::..... : . :..... : . :: . .. ::. .. :..
CCDS58 HNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQESWYKHT
240 250 260 270 280 290
350 360
pF1KB9 VMLALPSVRQIDATFVRF
:. . ..::.:
CCDS58 VLQNMMQLRQLDMKRITEEERRMASVLAKKEEEKKRESHKQSLLKEKKRLTINNVARQWD
300 310 320 330 340 350
>>CCDS55971.1 LRRC49 gene_id:54839|Hs108|chr15 (642 aa)
initn: 605 init1: 334 opt: 372 Z-score: 310.1 bits: 66.8 E(32554): 6e-11
Smith-Waterman score: 372; 34.3% identity (74.2% similar) in 198 aa overlap (157-354:64-258)
130 140 150 160 170 180
pF1KB9 LYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLH
:.: :.: :: : . .: :..:.:.:::.
CCDS55 FPILQRSSEEKILYSDRLSLERQKLTVCPIINGEDHL-RL--LNFQHNFITRIQNISNLQ
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB9 QLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIE
.: :.: .:.:. : ...:: :. :.::::.: :..::. : .: ::....:..::::
CCDS55 KLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITKIE
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB9 GLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDN
....: .:: : :..: . ...:.. ..:: :.. :.: ......: ::..... :
CCDS55 NINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQITFVRDVDNLPCLQHLFLSFN
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB9 LLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFVRF
. :..... : . :: . .. ::. .. :.. :. . ..::.:
CCDS55 NISSFDSVSCLADSSSLSDITFDGNPIAQESWYKHTVLQNMMQLRQLDMKRITEEERRMA
220 230 240 250 260 270
CCDS55 SVLAKKEEEKKRESHKQSLLKEKKRLTINNVARQWDLQQQRVANIATNEDRKDSDSPQDP
280 290 300 310 320 330
>>CCDS61694.1 LRRC49 gene_id:54839|Hs108|chr15 (676 aa)
initn: 605 init1: 334 opt: 372 Z-score: 309.8 bits: 66.8 E(32554): 6.2e-11
Smith-Waterman score: 372; 34.3% identity (74.2% similar) in 198 aa overlap (157-354:98-292)
130 140 150 160 170 180
pF1KB9 LYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLH
:.: :.: :: : . .: :..:.:.:::.
CCDS61 FPILQRSSEEKILYSDRLSLERQKLTVCPIINGEDHL-RL--LNFQHNFITRIQNISNLQ
70 80 90 100 110 120
190 200 210 220 230 240
pF1KB9 QLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIE
.: :.: .:.:. : ...:: :. :.::::.: :..::. : .: ::....:..::::
CCDS61 KLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITKIE
130 140 150 160 170 180
250 260 270 280 290 300
pF1KB9 GLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDN
....: .:: : :..: . ...:.. ..:: :.. :.: ......: ::..... :
CCDS61 NINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQITFVRDVDNLPCLQHLFLSFN
190 200 210 220 230 240
310 320 330 340 350 360
pF1KB9 LLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFVRF
. :..... : . :: . .. ::. .. :.. :. . ..::.:
CCDS61 NISSFDSVSCLADSSSLSDITFDGNPIAQESWYKHTVLQNMMQLRQLDMKRITEEERRMA
250 260 270 280 290 300
CCDS61 SVLAKKEEEKKRESHKQSLLKEKKRLTINNVARQWDLQQQRVANIATNEDRKDSDSPQDP
310 320 330 340 350 360
>>CCDS32282.1 LRRC49 gene_id:54839|Hs108|chr15 (686 aa)
initn: 605 init1: 334 opt: 372 Z-score: 309.7 bits: 66.8 E(32554): 6.3e-11
Smith-Waterman score: 372; 34.3% identity (74.2% similar) in 198 aa overlap (157-354:108-302)
130 140 150 160 170 180
pF1KB9 LYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLH
:.: :.: :: : . .: :..:.:.:::.
CCDS32 FPILQRSSEEKILYSDRLSLERQKLTVCPIINGEDHL-RL--LNFQHNFITRIQNISNLQ
80 90 100 110 120 130
190 200 210 220 230 240
pF1KB9 QLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIE
.: :.: .:.:. : ...:: :. :.::::.: :..::. : .: ::....:..::::
CCDS32 KLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITKIE
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB9 GLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDN
....: .:: : :..: . ...:.. ..:: :.. :.: ......: ::..... :
CCDS32 NINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQITFVRDVDNLPCLQHLFLSFN
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB9 LLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFVRF
. :..... : . :: . .. ::. .. :.. :. . ..::.:
CCDS32 NISSFDSVSCLADSSSLSDITFDGNPIAQESWYKHTVLQNMMQLRQLDMKRITEEERRMA
260 270 280 290 300 310
CCDS32 SVLAKKEEEKKRESHKQSLLKEKKRLTINNVARQWDLQQQRVANIATNEDRKDSDSPQDP
320 330 340 350 360 370
360 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 00:06:48 2016 done: Fri Nov 4 00:06:49 2016
Total Scan time: 2.800 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]