Result of FASTA (ccds) for
pF1KB9508
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9508, 343 aa
1>>>pF1KB9508 343 - 343 aa - 343 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2871+/-0.000684; mu= 18.0040+/- 0.041
mean_var=86.8630+/-17.500, 0's: 0 Z-trim(112.8): 19 B-trim: 400 in 1/50
Lambda= 0.137612
statistics sampled from 13463 (13481) to 13463 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.758), E-opt: 0.2 (0.414), width: 16
Scan time: 2.690
The best scores are: opt bits E(32554)
CCDS12258.1 PLPPR2 gene_id:64748|Hs108|chr19 ( 343) 2348 475.4 3e-134
CCDS59352.1 PLPPR2 gene_id:64748|Hs108|chr19 ( 427) 1853 377.2 1.3e-104
CCDS30779.1 PLPPR5 gene_id:163404|Hs108|chr1 ( 316) 1047 217.1 1.6e-56
CCDS30778.1 PLPPR5 gene_id:163404|Hs108|chr1 ( 321) 1039 215.5 4.8e-56
CCDS6751.1 PLPPR1 gene_id:54886|Hs108|chr9 ( 325) 998 207.4 1.4e-53
CCDS757.1 PLPPR4 gene_id:9890|Hs108|chr1 ( 763) 589 126.5 7.1e-29
CCDS58636.1 PLPPR3 gene_id:79948|Hs108|chr19 ( 718) 569 122.5 1.1e-27
CCDS53347.1 PLPPR4 gene_id:9890|Hs108|chr1 ( 705) 433 95.5 1.4e-19
CCDS12043.1 PLPPR3 gene_id:79948|Hs108|chr19 ( 746) 392 87.4 4.1e-17
CCDS45889.1 PLPP2 gene_id:8612|Hs108|chr19 ( 232) 308 70.2 1.9e-12
CCDS12023.1 PLPP2 gene_id:8612|Hs108|chr19 ( 288) 308 70.3 2.2e-12
CCDS12024.1 PLPP2 gene_id:8612|Hs108|chr19 ( 309) 308 70.4 2.3e-12
>>CCDS12258.1 PLPPR2 gene_id:64748|Hs108|chr19 (343 aa)
initn: 2348 init1: 2348 opt: 2348 Z-score: 2523.7 bits: 475.4 E(32554): 3e-134
Smith-Waterman score: 2348; 100.0% identity (100.0% similar) in 343 aa overlap (1-343:1-343)
10 20 30 40 50 60
pF1KB9 MAGGRPHLKRSFSIIPCFVFVESVLLGIVILLAYRLEFTDTFPVHTQGFFCYDSTYAKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MAGGRPHLKRSFSIIPCFVFVESVLLGIVILLAYRLEFTDTFPVHTQGFFCYDSTYAKPY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PGPEAASRVPPALVYALVTAGPTLTILLGELARAFFPAPPSAVPVIGESTIVSGACCRFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PGPEAASRVPPALVYALVTAGPTLTILLGELARAFFPAPPSAVPVIGESTIVSGACCRFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 PPVRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCLPPSPDRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PPVRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCLPPSPDRPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PDRFVTDQGACAGSPSLVAAARRAFPCKDAALCAYAVTYTAMYVTLVFRVKGSRLVKPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 PDRFVTDQGACAGSPSLVAAARRAFPCKDAALCAYAVTYTAMYVTLVFRVKGSRLVKPSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 CLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHNFQSRPPSGRRLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 CLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHNFQSRPPSGRRLSP
250 260 270 280 290 300
310 320 330 340
pF1KB9 WEDLGQAPTMDSPLEKNPRSAGRIRHRHGSPHPSRRTAPAVAT
:::::::::::::::::::::::::::::::::::::::::::
CCDS12 WEDLGQAPTMDSPLEKNPRSAGRIRHRHGSPHPSRRTAPAVAT
310 320 330 340
>>CCDS59352.1 PLPPR2 gene_id:64748|Hs108|chr19 (427 aa)
initn: 1853 init1: 1853 opt: 1853 Z-score: 1991.4 bits: 377.2 E(32554): 1.3e-104
Smith-Waterman score: 1943; 92.1% identity (92.1% similar) in 316 aa overlap (1-316:1-291)
10 20 30 40 50 60
pF1KB9 MAGGRPHLKRSFSIIPCFVFVESVLLGIVILLAYRLEFTDTFPVHTQGFFCYDSTYAKPY
:::::::::::::::::::::: :::::::::::::
CCDS59 MAGGRPHLKRSFSIIPCFVFVE-------------------------GFFCYDSTYAKPY
10 20 30
70 80 90 100 110 120
pF1KB9 PGPEAASRVPPALVYALVTAGPTLTILLGELARAFFPAPPSAVPVIGESTIVSGACCRFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 PGPEAASRVPPALVYALVTAGPTLTILLGELARAFFPAPPSAVPVIGESTIVSGACCRFS
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB9 PPVRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCLPPSPDRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 PPVRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCLPPSPDRPG
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB9 PDRFVTDQGACAGSPSLVAAARRAFPCKDAALCAYAVTYTAMYVTLVFRVKGSRLVKPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 PDRFVTDQGACAGSPSLVAAARRAFPCKDAALCAYAVTYTAMYVTLVFRVKGSRLVKPSL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB9 CLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHNFQSRPPSGRRLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 CLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHNFQSRPPSGRRLSP
220 230 240 250 260 270
310 320 330 340
pF1KB9 WEDLGQAPTMDSPLEKNPRSAGRIRHRHGSPHPSRRTAPAVAT
::::::::::::::::
CCDS59 WEDLGQAPTMDSPLEKLSVAQEPEVCRPHSTPARLTPSKSQNCARRGHLIPSCVSSRAPA
280 290 300 310 320 330
>>CCDS30779.1 PLPPR5 gene_id:163404|Hs108|chr1 (316 aa)
initn: 1053 init1: 445 opt: 1047 Z-score: 1128.3 bits: 217.1 E(32554): 1.6e-56
Smith-Waterman score: 1047; 51.0% identity (78.6% similar) in 308 aa overlap (19-321:13-311)
10 20 30 40 50 60
pF1KB9 MAGGRPHLKRSFSIIPCFVFVESVLLGIVILLAYRLEFTDTFPVHTQGFFCYDSTYAKPY
.. . :... ...::: .:.:::: :..:::::.::.: :::
CCDS30 MPLLPAALTSSMLYFQMVIMAGTVMLAYYFEYTDTFTVNVQGFFCHDSAYRKPY
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 PGPEAASRVPPALVYALVTAGPTLTILLGELARAFFPAPPSAVPVIGESTIVSGACCRFS
:::: .: :::.:.:.:... :.:.:..:: : .: . :.::..: :: ..
CCDS30 PGPEDSSAVPPVLLYSLAAGVPVLVIIVGETA-VFCLQLATRDFENQEKTILTGDCCYIN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 PPVRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCLPPSPDRPG
: ::: :::::.:.::::.: ::.::::::::: .::::..:.:::::::: .
CCDS30 PLVRRTVRFLGIYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQYT-----
120 130 140 150 160
190 200 210 220 230 240
pF1KB9 PDRFVTDQGACAGSPSLVAAARRAFPCKDAALCAYAVTYTAMYVTLVFRVKGSRLVKPSL
.:.. . ::.:.:.:. ::..:: :.::: .::. : .::.: ....::.::.:: :
CCDS30 --QFISGEEACTGNPDLIMRARKTFPSKEAALSVYAAMYLTMYITNTIKAKGTRLAKPVL
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 CLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHNFQSRPPSGRRLSP
::.:.: :::.:. ::::::::::::.::::.: .::.:::.:::.::..: ....
CCDS30 CLGLMCLAFLTGLNRVAEYRNHWSDVIAGFLVGISIAVFLVVCVVNNFKGRQAENEHIH-
230 240 250 260 270 280
310 320 330 340
pF1KB9 WEDLGQAPTM-----DSPLEKNPRSAGRIRHRHGSPHPSRRTAPAVAT
..:.: : . .:::::: .:
CCDS30 MDNLAQMPMISIPRVESPLEKNHITAFAEVT
290 300 310
>>CCDS30778.1 PLPPR5 gene_id:163404|Hs108|chr1 (321 aa)
initn: 1046 init1: 445 opt: 1039 Z-score: 1119.6 bits: 215.5 E(32554): 4.8e-56
Smith-Waterman score: 1039; 51.2% identity (78.9% similar) in 303 aa overlap (19-316:13-306)
10 20 30 40 50 60
pF1KB9 MAGGRPHLKRSFSIIPCFVFVESVLLGIVILLAYRLEFTDTFPVHTQGFFCYDSTYAKPY
.. . :... ...::: .:.:::: :..:::::.::.: :::
CCDS30 MPLLPAALTSSMLYFQMVIMAGTVMLAYYFEYTDTFTVNVQGFFCHDSAYRKPY
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 PGPEAASRVPPALVYALVTAGPTLTILLGELARAFFPAPPSAVPVIGESTIVSGACCRFS
:::: .: :::.:.:.:... :.:.:..:: : .: . :.::..: :: ..
CCDS30 PGPEDSSAVPPVLLYSLAAGVPVLVIIVGETA-VFCLQLATRDFENQEKTILTGDCCYIN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 PPVRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCLPPSPDRPG
: ::: :::::.:.::::.: ::.::::::::: .::::..:.:::::::: .
CCDS30 PLVRRTVRFLGIYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQYT-----
120 130 140 150 160
190 200 210 220 230 240
pF1KB9 PDRFVTDQGACAGSPSLVAAARRAFPCKDAALCAYAVTYTAMYVTLVFRVKGSRLVKPSL
.:.. . ::.:.:.:. ::..:: :.::: .::. : .::.: ....::.::.:: :
CCDS30 --QFISGEEACTGNPDLIMRARKTFPSKEAALSVYAAMYLTMYITNTIKAKGTRLAKPVL
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 CLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHNFQSRPPSGRRLSP
::.:.: :::.:. ::::::::::::.::::.: .::.:::.:::.::..: ....
CCDS30 CLGLMCLAFLTGLNRVAEYRNHWSDVIAGFLVGISIAVFLVVCVVNNFKGRQAENEHIH-
230 240 250 260 270 280
310 320 330 340
pF1KB9 WEDLGQAPTM-----DSPLEKNPRSAGRIRHRHGSPHPSRRTAPAVAT
..:.: : . .:::::
CCDS30 MDNLAQMPMISIPRVESPLEKVTSVQNHITAFAEVT
290 300 310 320
>>CCDS6751.1 PLPPR1 gene_id:54886|Hs108|chr9 (325 aa)
initn: 960 init1: 369 opt: 998 Z-score: 1075.6 bits: 207.4 E(32554): 1.4e-53
Smith-Waterman score: 1001; 47.3% identity (72.4% similar) in 319 aa overlap (1-315:1-310)
10 20 30 40 50 60
pF1KB9 MAGGRPHLKRSFSIIPCFVFVESVLLGIVILLAYRLEFTDTFPVHTQGFFCYDSTYAKPY
:: : . .::.::::::.::: :... ..:::: .: :::: :: ::::: :. :::
CCDS67 MAVGN-NTQRSYSIIPCFIFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 PGPEAASRVPPALVYALVTAGPTLTILLGELARAFFPAPPSAVPVIGESTIVSGACCRFS
:: : : . : ..: ...: :: :..::.. :. . .. . :.::..: :: ..
CCDS67 PGTEEESFITPLVLYCVLAATPTAIIFIGEISMYFIKSTRESL-IAQEKTILTGECCYLN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 PPVRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCLPPSPDRPG
: .::..:: ::..::::.: ::.::::::::. ::.::.::.::::. : .
CCDS67 PLLRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADC-------QA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 PDRFVTDQGACAGSPSLVAAARRAFPCKDAALCAYAVTYTAMYVTLVFRVKGSRLVKPSL
.:... . :.:. .. :::.:: : ::: :.. :..::.: ....:.:::.:: :
CCDS67 HHQFINNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 CLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHNFQSRPPSGRRLSP
::. :: :::.:. ::.::::: :::.:::. :.:.: :: ::::::.. : . .:
CCDS67 CLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKP
240 250 260 270 280 290
310 320 330 340
pF1KB9 WEDLGQA----PTMDSPLEKNPRSAGRIRHRHGSPHPSRRTAPAVAT
. : : ..::::
CCDS67 EDPRGVPLMAFPRIESPLETLSAQNHSASMTEVT
300 310 320
>>CCDS757.1 PLPPR4 gene_id:9890|Hs108|chr1 (763 aa)
initn: 479 init1: 172 opt: 589 Z-score: 631.9 bits: 126.5 E(32554): 7.1e-29
Smith-Waterman score: 589; 33.8% identity (62.5% similar) in 349 aa overlap (5-341:54-386)
10 20 30
pF1KB9 MAGGRPH---LKRSFSIIPCFVFVESVLLGIVIL
::. .: : ...::: ::: .:. ..
CCDS75 EEAARLSCAVHTSPGGGRRPGQAAGMSAKERPKGKVIKDSVTLLPCFYFVELPILASSVV
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB9 LAYRLEFTDTF-PVHTQGFFCYDSTYAKPYPGPEAASRVPPALVYALVTAGPTLTILLGE
: ::.::.: :::. :: ::: . . :: : . .: .. .:. :::..::..::
CCDS75 SLYFLELTDVFKPVHS-GFSCYDRSLSMPYIEPTQEA-IPFLMLLSLAFAGPAITIMVGE
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB9 LARAFFPAPPSAVPVIGESTIVSGACCRFSPPVRRLVRFLGVYSFGLFTTTIFANAGQVV
.. . .: .... : :. .:: :::.::. ::: .:..... :.
CCDS75 --GILYCCLSKRRNGVGLEPNINAGGCNFNSFLRRAVRFVGVHVFGLCSTALITDIIQLS
150 160 170 180 190
160 170 180 190 200
pF1KB9 TGNPTPHFLSVCRPNYTALG--CLPPSPDRPGPDRFVTDQGACAGSP-SLVAAARRAFPC
:: .:.::.::.::::.:. : : .: : :.:: ... ..:..::
CCDS75 TGYQAPYFLTVCKPNYTSLNVSCKENS-------YIVED--ICSGSDLTVINSGRKSFPS
200 210 220 230 240 250
210 220 230 240 250 260
pF1KB9 KDAALCAYAVTYTAMYVTLVFRVKGSRLVKPSLCLALLCPAFLVGVVRVAEYRNHWSDVL
. :.: :.:..:..:: . .. . .:.:.:: : .... ... :..:...:.:: ::
CCDS75 QHATLAAFAAVYVSMYFNSTL-TDSSKLLKPLLVFTFIICGIICGLTRITQYKNHPVDVY
260 270 280 290 300
270 280 290 300 310 320
pF1KB9 AGFLTGAAIATFLVTCVVHNFQSRPPSGRR----LSPWEDLGQAPT-MDSPLEKNPRSAG
::: :..:: .: .: :: : . : ::.: :. . : :: :.
CCDS75 CGFLIGGGIALYLGLYAVGNFLPSDESMFQHRDALRSLTDLNQDPNRLLSA--KNGSSSD
310 320 330 340 350 360
330 340
pF1KB9 RIRHRHGSPHPSRRTAPAVAT
: : .: . ..: : ..
CCDS75 GIAHTEGILNRNHRDASSLTNLKRANADVEIITPRSPMGKENMVTFSNTLPRANTPSVED
370 380 390 400 410 420
>>CCDS58636.1 PLPPR3 gene_id:79948|Hs108|chr19 (718 aa)
initn: 528 init1: 179 opt: 569 Z-score: 610.8 bits: 122.5 E(32554): 1.1e-27
Smith-Waterman score: 569; 33.6% identity (62.4% similar) in 348 aa overlap (9-343:12-348)
10 20 30 40 50
pF1KB9 MAGGRPHLKRSFSIIPCFVFVESVLLGIVILLAYRLEFTDTFPVHTQGFFCYDSTYA
: :....::: ::: ... :. : ::.:: : :: ::: : .
CCDS58 MISTKEKNKIPKDSMTLLPCFYFVELPIVASSIVSLYFLELTDLFKPAKVGFQCYDRTLS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 KPYPGPEAASRVPPALVYALVTAGPTLTILLGELARAFFPA---PPSAVPVIGESTIVSG
:: .: .. .:. :.:. .:...: . . .. :. .:..: .:
CCDS58 MPYV-ETNEELIPLLMLLSLAFAAPAASIMVAEGMLYCLQSRLWGRAGGPAGAEGSINAG
70 80 90 100 110
120 130 140 150 160 170
pF1KB9 ACCRFSPPVRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCLPP
.: :. .:: :::.::. ::: .:.. ... :..:: :: ::.::.:::: ::
CCDS58 GC-NFNSFLRRTVRFVGVHVFGLCATALVTDVIQLATGYHTPFFLTVCKPNYTLLG----
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 SPDRPGPDRFVTDQGACAGSP-SLVAAARRAFPCKDAALCAYAVTYTAMYVTLVFRVKGS
. . .: ..: : :.: . .::..:: . :.: :.:..:..:: . :. .
CCDS58 TSCEVNP--YIT-QDICSGHDIHAILSARKTFPSQHATLSAFAAVYVSMYFNSVIS-DTT
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB9 RLVKPSLCLALLCPAFLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHNFQSRPP
.:.:: : .:. : . :......::.: :: :::: ::.::..:. .: :::. ::
CCDS58 KLLKPILVFAFAIAAGVCGLTQITQYRSHPVDVYAGFLIGAGIAAYLACHAVGNFQA-PP
240 250 260 270 280
300 310 320 330 340
pF1KB9 SGRRLSPW--EDLGQAPTM---DSPLEKNPRSA----GRIRHRHGSPHPSRRTAPAVAT
. . .: .: .: :. :: ..: . : . .:.:.: : ....
CCDS58 AEKPAAPAPAKDALRALTQRGHDSVYQQNKSVSTDELGPPGRLEGAPRPVAREKTSLGSL
290 300 310 320 330 340
CCDS58 KRASVDVDLLAPRSPMAKENMVTFSHTLPRASAPSLDDPARRHMTIHVPLDASRSKQLIS
350 360 370 380 390 400
>>CCDS53347.1 PLPPR4 gene_id:9890|Hs108|chr1 (705 aa)
initn: 356 init1: 172 opt: 433 Z-score: 464.9 bits: 95.5 E(32554): 1.4e-19
Smith-Waterman score: 433; 36.1% identity (65.2% similar) in 233 aa overlap (5-228:54-272)
10 20 30
pF1KB9 MAGGRPH---LKRSFSIIPCFVFVESVLLGIVIL
::. .: : ...::: ::: .:. ..
CCDS53 EEAARLSCAVHTSPGGGRRPGQAAGMSAKERPKGKVIKDSVTLLPCFYFVELPILASSVV
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB9 LAYRLEFTDTF-PVHTQGFFCYDSTYAKPYPGPEAASRVPPALVYALVTAGPTLTILLGE
: ::.::.: :::. :: ::: . . :: : . .: .. .:. :::..::..::
CCDS53 SLYFLELTDVFKPVHS-GFSCYDRSLSMPYIEPTQEA-IPFLMLLSLAFAGPAITIMVGE
90 100 110 120 130 140
100 110 120 130 140
pF1KB9 -LARAFFPAPPSAVPVIGESTIVSGACCRFSPPVRRLVRFLGVYSFGLFTTTIFANAGQV
. . ..: . : .: .:.: :. .:: :::.::. ::: .:..... :.
CCDS53 GILYCCLSKRRNGVGL--EPNINAGGC-NFNSFLRRAVRFVGVHVFGLCSTALITDIIQL
150 160 170 180 190
150 160 170 180 190 200
pF1KB9 VTGNPTPHFLSVCRPNYTALG--CLPPSPDRPGPDRFVTDQGACAGSP-SLVAAARRAFP
:: .:.::.::.::::.:. : : .: : :.:: ... ..:..::
CCDS53 STGYQAPYFLTVCKPNYTSLNVSCKENS-------YIVED--ICSGSDLTVINSGRKSFP
200 210 220 230 240
210 220 230 240 250 260
pF1KB9 CKDAALCAYAVTY-TAMYVTLVFRVKGSRLVKPSLCLALLCPAFLVGVVRVAEYRNHWSD
. :.: :.:..: ...:.. :
CCDS53 SQHATLAAFAAVYVSGLYAVGNFLPSDESMFQHRDALRSLTDLNQDPNRLLSAKNGSSSD
250 260 270 280 290 300
>>CCDS12043.1 PLPPR3 gene_id:79948|Hs108|chr19 (746 aa)
initn: 461 init1: 179 opt: 392 Z-score: 420.6 bits: 87.4 E(32554): 4.1e-17
Smith-Waterman score: 503; 31.2% identity (58.1% similar) in 375 aa overlap (9-343:12-376)
10 20 30 40 50
pF1KB9 MAGGRPHLKRSFSIIPCFVFVESVLLGIVILLAYRLEFTDTFPVHTQGFFCYDSTYA
: :....::: ::: ... :. : ::.:: : :: ::: : .
CCDS12 MISTKEKNKIPKDSMTLLPCFYFVELPIVASSIVSLYFLELTDLFKPAKVGFQCYDRTLS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 KPYPGPEAASRVPPALVYALVTAGPTLTILLGELARAFFPA---PPSAVPVIGESTIVSG
:: .: .. .:. :.:. .:...: . . .. :. .:..: .:
CCDS12 MPYV-ETNEELIPLLMLLSLAFAAPAASIMVAEGMLYCLQSRLWGRAGGPAGAEGSINAG
70 80 90 100 110
120 130 140 150 160 170
pF1KB9 ACCRFSPPVRRLVRFLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCLPP
.: :. .:: :::.::. ::: .:.. ... :..:: :: ::.::.:::: ::
CCDS12 GC-NFNSFLRRTVRFVGVHVFGLCATALVTDVIQLATGYHTPFFLTVCKPNYTLLG----
120 130 140 150 160 170
180 190 200 210 220
pF1KB9 SPDRPGPDRFVTDQGACAGSP-SLVAAARRAFPCKDAALCAYAVTYTAM--------YVT
. . .: ..: : :.: . .::..:: . :.: :.:..:... .
CCDS12 TSCEVNP--YIT-QDICSGHDIHAILSARKTFPSQHATLSAFAAVYVSVSPAPHCPSQAL
180 190 200 210 220 230
230 240 250 260
pF1KB9 LVFRVKGS-------------------RLVKPSLCLALLCPAFLVGVVRVAEYRNHWSDV
:. : . : .:.:: : .:. : . :......::.: ::
CCDS12 LLTRGEPSLTPTPMPQMYFNSVISDTTKLLKPILVFAFAIAAGVCGLTQITQYRSHPVDV
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB9 LAGFLTGAAIATFLVTCVVHNFQSRPPSGRRLSPW--EDLGQAPTM---DSPLEKNPRSA
:::: ::.::..:. .: :::. ::. . .: .: .: :. :: ..: .
CCDS12 YAGFLIGAGIAAYLACHAVGNFQA-PPAEKPAAPAPAKDALRALTQRGHDSVYQQNKSVS
300 310 320 330 340 350
330 340
pF1KB9 ----GRIRHRHGSPHPSRRTAPAVAT
: . .:.:.: : ....
CCDS12 TDELGPPGRLEGAPRPVAREKTSLGSLKRASVDVDLLAPRSPMAKENMVTFSHTLPRASA
360 370 380 390 400 410
>>CCDS45889.1 PLPP2 gene_id:8612|Hs108|chr19 (232 aa)
initn: 336 init1: 251 opt: 308 Z-score: 337.1 bits: 70.2 E(32554): 1.9e-12
Smith-Waterman score: 351; 29.8% identity (61.0% similar) in 218 aa overlap (119-334:32-231)
90 100 110 120 130 140
pF1KB9 GELARAFFPAPPSAVPVIGESTIVSGACCRFSPPVRRLVRFLGVYSFGLFTTTIFANAGQ
:. : . . ::.. :: .. ... ..
CCDS45 AGVTITATVILVSAGEAYLVYTDRLYSRSDFNNYVAAVYKVLGTFLFGAAVSQSLTDLAK
10 20 30 40 50 60
150 160 170 180 190 200
pF1KB9 VVTGNPTPHFLSVCRPNYTALGCLPPSPDRPGPDRFVTDQGACAGSPSLVAAARRAFPCK
. : :.::.:: :... ..: . .: . .: :.:. :. :: .:
CCDS45 YMIGRLRPNFLAVCDPDWSRVNC----------SVYVQLEKVCRGNPADVTEARLSFYSG
70 80 90 100 110
210 220 230 240 250 260
pF1KB9 DAALCAYAVTYTAMYVTLVFRVKGSRLVKPSLCLALLCPAFLVGVVRVAEYRNHWSDVLA
... : ... :.:: . : .::..:.. . :. :. :: .::..:..::::::.
CCDS45 HSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLV
120 130 140 150 160 170
270 280 290 300 310 320
pF1KB9 GFLTGAAIATFLVTCVVHNF-QSRPPSGRRLSPWEDLGQAPTMDSPLEKNPRSAGRIRHR
:.: :: .:. :..: . .: ..::: .. :.: . :... : . :. :
CCDS45 GLLQGALVAA-LTVCYISDFFKARPP--QHCLKEEELERKPSLSLTL-----TLGEADHN
180 190 200 210 220
330 340
pF1KB9 H-GSPHPSRRTAPAVAT
: : :: :
CCDS45 HYGYPHSSS
230
343 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 21:01:37 2016 done: Sat Nov 5 21:01:37 2016
Total Scan time: 2.690 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]