Result of FASTA (omim) for
pF1KB9477
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9477, 333 aa
1>>>pF1KB9477 333 - 333 aa - 333 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8387+/-0.000319; mu= 6.4716+/- 0.020
mean_var=190.7081+/-37.998, 0's: 0 Z-trim(122.2): 9 B-trim: 0 in 0/55
Lambda= 0.092873
statistics sampled from 40058 (40069) to 40058 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.773), E-opt: 0.2 (0.47), width: 16
Scan time: 8.910
The best scores are: opt bits E(85289)
NP_974197 (OMIM: 605072) PDZ domain-containing pro ( 333) 2231 310.6 2.9e-84
XP_016881636 (OMIM: 605072) PREDICTED: PDZ domain- ( 333) 2231 310.6 2.9e-84
NP_005707 (OMIM: 605072) PDZ domain-containing pro ( 333) 2231 310.6 2.9e-84
NP_974199 (OMIM: 605072) PDZ domain-containing pro ( 333) 2231 310.6 2.9e-84
XP_016881637 (OMIM: 605072) PREDICTED: PDZ domain- ( 236) 1553 219.7 5e-57
NP_974198 (OMIM: 605072) PDZ domain-containing pro ( 236) 1553 219.7 5e-57
NP_974223 (OMIM: 605072) PDZ domain-containing pro ( 236) 1553 219.7 5e-57
NP_573568 (OMIM: 601869,608792) PDZ domain-contain ( 312) 1288 184.3 3e-46
XP_005259549 (OMIM: 601869,608792) PREDICTED: PDZ (1349) 1125 163.0 3.3e-39
>>NP_974197 (OMIM: 605072) PDZ domain-containing protein (333 aa)
initn: 2231 init1: 2231 opt: 2231 Z-score: 1633.8 bits: 310.6 E(85289): 2.9e-84
Smith-Waterman score: 2231; 100.0% identity (100.0% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KB9 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPALRPRLVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPALRPRLVF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 DFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 DFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 INGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 INGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 GTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDEL
250 260 270 280 290 300
310 320 330
pF1KB9 AEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY
:::::::::::::::::::::::::::::::::
NP_974 AEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY
310 320 330
>>XP_016881636 (OMIM: 605072) PREDICTED: PDZ domain-cont (333 aa)
initn: 2231 init1: 2231 opt: 2231 Z-score: 1633.8 bits: 310.6 E(85289): 2.9e-84
Smith-Waterman score: 2231; 100.0% identity (100.0% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KB9 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPALRPRLVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPALRPRLVF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 DFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 INGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 INGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDEL
250 260 270 280 290 300
310 320 330
pF1KB9 AEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY
:::::::::::::::::::::::::::::::::
XP_016 AEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY
310 320 330
>>NP_005707 (OMIM: 605072) PDZ domain-containing protein (333 aa)
initn: 2231 init1: 2231 opt: 2231 Z-score: 1633.8 bits: 310.6 E(85289): 2.9e-84
Smith-Waterman score: 2231; 100.0% identity (100.0% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KB9 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPALRPRLVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPALRPRLVF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 DFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 INGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 INGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDEL
250 260 270 280 290 300
310 320 330
pF1KB9 AEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY
:::::::::::::::::::::::::::::::::
NP_005 AEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY
310 320 330
>>NP_974199 (OMIM: 605072) PDZ domain-containing protein (333 aa)
initn: 2231 init1: 2231 opt: 2231 Z-score: 1633.8 bits: 310.6 E(85289): 2.9e-84
Smith-Waterman score: 2231; 100.0% identity (100.0% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KB9 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPALRPRLVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPALRPRLVF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 DFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 DFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 INGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 INGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 GTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDEL
250 260 270 280 290 300
310 320 330
pF1KB9 AEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY
:::::::::::::::::::::::::::::::::
NP_974 AEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY
310 320 330
>>XP_016881637 (OMIM: 605072) PREDICTED: PDZ domain-cont (236 aa)
initn: 1553 init1: 1553 opt: 1553 Z-score: 1144.8 bits: 219.7 E(85289): 5e-57
Smith-Waterman score: 1553; 100.0% identity (100.0% similar) in 236 aa overlap (98-333:1-236)
70 80 90 100 110 120
pF1KB9 SPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLEDFIFAHV
::::::::::::::::::::::::::::::
XP_016 MFCTLNTHKVDMDKLLGGQIGLEDFIFAHV
10 20 30
130 140 150 160 170 180
pF1KB9 KGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEAINGQSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEAINGQSLL
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB9 GCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGRGTLRLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGRGTLRLRS
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB9 RGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDELAEALDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDELAEALDER
160 170 180 190 200 210
310 320 330
pF1KB9 LGDFAFPDEFVFDVWGAIGDAKVGRY
::::::::::::::::::::::::::
XP_016 LGDFAFPDEFVFDVWGAIGDAKVGRY
220 230
>>NP_974198 (OMIM: 605072) PDZ domain-containing protein (236 aa)
initn: 1553 init1: 1553 opt: 1553 Z-score: 1144.8 bits: 219.7 E(85289): 5e-57
Smith-Waterman score: 1553; 100.0% identity (100.0% similar) in 236 aa overlap (98-333:1-236)
70 80 90 100 110 120
pF1KB9 SPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLEDFIFAHV
::::::::::::::::::::::::::::::
NP_974 MFCTLNTHKVDMDKLLGGQIGLEDFIFAHV
10 20 30
130 140 150 160 170 180
pF1KB9 KGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEAINGQSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 KGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEAINGQSLL
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB9 GCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGRGTLRLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 GCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGRGTLRLRS
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB9 RGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDELAEALDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 RGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDELAEALDER
160 170 180 190 200 210
310 320 330
pF1KB9 LGDFAFPDEFVFDVWGAIGDAKVGRY
::::::::::::::::::::::::::
NP_974 LGDFAFPDEFVFDVWGAIGDAKVGRY
220 230
>>NP_974223 (OMIM: 605072) PDZ domain-containing protein (236 aa)
initn: 1553 init1: 1553 opt: 1553 Z-score: 1144.8 bits: 219.7 E(85289): 5e-57
Smith-Waterman score: 1553; 100.0% identity (100.0% similar) in 236 aa overlap (98-333:1-236)
70 80 90 100 110 120
pF1KB9 SPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLEDFIFAHV
::::::::::::::::::::::::::::::
NP_974 MFCTLNTHKVDMDKLLGGQIGLEDFIFAHV
10 20 30
130 140 150 160 170 180
pF1KB9 KGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEAINGQSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 KGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEAINGQSLL
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB9 GCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGRGTLRLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 GCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGRGTLRLRS
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB9 RGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDELAEALDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_974 RGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDELAEALDER
160 170 180 190 200 210
310 320 330
pF1KB9 LGDFAFPDEFVFDVWGAIGDAKVGRY
::::::::::::::::::::::::::
NP_974 LGDFAFPDEFVFDVWGAIGDAKVGRY
220 230
>>NP_573568 (OMIM: 601869,608792) PDZ domain-containing (312 aa)
initn: 1306 init1: 1280 opt: 1288 Z-score: 951.3 bits: 184.3 E(85289): 3e-46
Smith-Waterman score: 1288; 66.1% identity (84.9% similar) in 298 aa overlap (39-329:11-308)
10 20 30 40 50 60
pF1KB9 KKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPP----PPAL---RPRLVFH
:. :. . ::: ::: ::::::.
NP_573 MEGAAAREARGTETPRASAPPPAPSEPPAAPRARPRLVFR
10 20 30 40
70 80 90 100 110 120
pF1KB9 TQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLED
::::::::::.:::::::.:::.:::::: . .:..:::::.:::::.:::::::::::
NP_573 TQLAHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEILFCTLNSHKVDMQKLLGGQIGLED
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 FIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEAI
::::::.:. ::::: :.:::::::::::::::::::::::::.:..:. . ::: ::::
NP_573 FIFAHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAI
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 NGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGRG
: .:..::::::::..:.:::... :::.:..:..:::::.::: ... .. .::
NP_573 NDHSIVGCRHYEVAKMLRELPKSQPFTLRLVQPKRAFDMIGQRSRSSKCPVEAKVTSGRE
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 TLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDELA
:::::: : ::::. :: :::.: .:::::::::::::: :::.:::: .: . .:.:
NP_573 TLRLRSGGAATVEEAPSEFEEEASRKVDDLLESYMGIRDPELASTMVETSKKTASAQEFA
230 240 250 260 270 280
310 320 330
pF1KB9 EALDERLGDFAFPDEFVFDVWGAIGDAKVGRY
. :: ::.:::::::: .::.:::.:.
NP_573 RCLDSVLGEFAFPDEFVVEVWAAIGEAREACG
290 300 310
>>XP_005259549 (OMIM: 601869,608792) PREDICTED: PDZ doma (1349 aa)
initn: 1108 init1: 1108 opt: 1125 Z-score: 824.9 bits: 163.0 E(85289): 3.3e-39
Smith-Waterman score: 1125; 59.7% identity (79.0% similar) in 305 aa overlap (39-332:11-312)
10 20 30 40 50 60
pF1KB9 KKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPP----PPAL---RPRLVFH
:. :. . ::: ::: ::::::.
XP_005 MEGAAAREARGTETPRASAPPPAPSEPPAAPRARPRLVFR
10 20 30 40
70 80 90 100 110 120
pF1KB9 TQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLED
::::::::::.:::::::.:::.:::::: . .:..:::::.:::::.:::::::::::
XP_005 TQLAHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEILFCTLNSHKVDMQKLLGGQIGLED
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 FIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEAI
::::::.:. ::::: :.:::::::::::::::::::::::::.:..:. . ::: ::::
XP_005 FIFAHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAI
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 NGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGRG
: .:..::::::::..:.:::... :::.:..:..:::::.::: ... .. .::
XP_005 NDHSIVGCRHYEVAKMLRELPKSQPFTLRLVQPKRAFDMIGQRSRSSKCPVEAKVTSGRE
170 180 190 200 210 220
250 260 270 280 290
pF1KB9 TLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELA-ATMVELGKDKRNPDE-
:::::: : ::::. :: :::.: .:::::::::::::: ::. . :. : : .. .:
XP_005 TLRLRSGGAATVEEAPSEFEEEASRKVDDLLESYMGIRDPELGKGPGVHHGGDVQEDSER
230 240 250 260 270 280
300 310 320 330
pF1KB9 --LAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY
. . ::: .: . :..: . :.
XP_005 PGVCTLFRLRLGRVRLPRRVC---GGSVGRHRRGQRGLWLVCPGGAQHSPSPEPSPLPRP
290 300 310 320 330
XP_005 CSRTQPRSEDKFLSRTQSNLEPQPNSRTQPFSRIQPRSEAKLCARAQASSETKPSIENKL
340 350 360 370 380 390
333 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 23:46:10 2016 done: Thu Nov 3 23:46:11 2016
Total Scan time: 8.910 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]