Result of FASTA (ccds) for
pF1KB9468
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9468, 2144 aa
1>>>pF1KB9468 2144 - 2144 aa - 2144 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9379+/-0.00143; mu= 21.6072+/- 0.086
mean_var=68.6135+/-13.521, 0's: 0 Z-trim(98.2): 42 B-trim: 21 in 1/47
Lambda= 0.154835
statistics sampled from 5283 (5287) to 5283 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.487), E-opt: 0.2 (0.162), width: 16
Scan time: 4.320
The best scores are: opt bits E(32554)
CCDS31066.1 HEATR1 gene_id:55127|Hs108|chr1 (2144) 13740 3079.8 0
>>CCDS31066.1 HEATR1 gene_id:55127|Hs108|chr1 (2144 aa)
initn: 13740 init1: 13740 opt: 13740 Z-score: 16570.6 bits: 3079.8 E(32554): 0
Smith-Waterman score: 13740; 100.0% identity (100.0% similar) in 2144 aa overlap (1-2144:1-2144)
10 20 30 40 50 60
pF1KB9 MTSLAQQLQRLALPQSDASLLSRDEVASLLFDPKEAATIDRDTAFAIGCTGLEELLGIDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MTSLAQQLQRLALPQSDASLLSRDEVASLLFDPKEAATIDRDTAFAIGCTGLEELLGIDP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SFEQFEAPLFSQLAKTLERSVQTKAVNKQLDENISLFLIHLSPYFLLKPAQKCLEWLIHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SFEQFEAPLFSQLAKTLERSVQTKAVNKQLDENISLFLIHLSPYFLLKPAQKCLEWLIHR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 FHIHLYNQDSLIACVLPYHETRIFVRVIQLLKINNSKHRWFWLLPVKQSGVPLAKGTLIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 FHIHLYNQDSLIACVLPYHETRIFVRVIQLLKINNSKHRWFWLLPVKQSGVPLAKGTLIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HCYKDLGFMDFICSLVTKSVKVFAEYPGSSAQLRVLLAFYASTIVSALVAAEDVSDNIIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 HCYKDLGFMDFICSLVTKSVKVFAEYPGSSAQLRVLLAFYASTIVSALVAAEDVSDNIIA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 KLFPYIQKGLKSSLPDYRAATYMIICQISVKVTMENTFVNSLASQIIKTLTKIPSLIKDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KLFPYIQKGLKSSLPDYRAATYMIICQISVKVTMENTFVNSLASQIIKTLTKIPSLIKDG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 LSCLIVLLQRQKPESLGKKPFPHLCNVPDLITILHGISETYDVSPLLHYMLPHLVVSIIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LSCLIVLLQRQKPESLGKKPFPHLCNVPDLITILHGISETYDVSPLLHYMLPHLVVSIIH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 HVTGEETEGMDGQIYKRHLEAILTKISLKNNLDHLLASLLFEEYISYSSQEEMDSNKVSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 HVTGEETEGMDGQIYKRHLEAILTKISLKNNLDHLLASLLFEEYISYSSQEEMDSNKVSL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 LNEQFLPLIRLLESKYPRTLDVVLEEHLKEIADLKKQELFHQFVSLSTSGGKYQFLADSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LNEQFLPLIRLLESKYPRTLDVVLEEHLKEIADLKKQELFHQFVSLSTSGGKYQFLADSD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 TSLMLSLNHPLAPVRILAMNHLKKIMKTSKEGVDESFIKEAVLARLGDDNIDVVLSAISA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TSLMLSLNHPLAPVRILAMNHLKKIMKTSKEGVDESFIKEAVLARLGDDNIDVVLSAISA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 FEIFKEHFSSEVTISNLLNLFQRAELSKNGEWYEVLKIAADILIKEEILSENDQLSNQVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 FEIFKEHFSSEVTISNLLNLFQRAELSKNGEWYEVLKIAADILIKEEILSENDQLSNQVV
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 VCLLPFMVINNDDTESAEMKIAIYLSKSGICSLHPLLRGWEEALENVIKSTKPGKLIGVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VCLLPFMVINNDDTESAEMKIAIYLSKSGICSLHPLLRGWEEALENVIKSTKPGKLIGVA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB9 NQKMIELLADNINLGDPSSMLKMVEDLISVGEEESFNLKQKVTFHVILSVLVSCCSSLKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 NQKMIELLADNINLGDPSSMLKMVEDLISVGEEESFNLKQKVTFHVILSVLVSCCSSLKE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB9 THFPFAIRVFSLLQKKIKKLESVITAVEIPSEWHIELMLDRGIPVELWAHYVEELNSTQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 THFPFAIRVFSLLQKKIKKLESVITAVEIPSEWHIELMLDRGIPVELWAHYVEELNSTQR
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB9 VAVEDSVFLVFSLKKFIYALKAPKSFPKGDIWWNPEQLKEDSRDYLHLLIGLFEMMLNGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VAVEDSVFLVFSLKKFIYALKAPKSFPKGDIWWNPEQLKEDSRDYLHLLIGLFEMMLNGA
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB9 DAVHFRVLMKLFIKVHLEDVFQLFKFCSVLWTYGSSLSNPLNCSVKTVLQTQALYVGCAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DAVHFRVLMKLFIKVHLEDVFQLFKFCSVLWTYGSSLSNPLNCSVKTVLQTQALYVGCAM
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB9 LSSQKTQCKHQLASISSPVVTSLLINLGSPVKEVRRAAIQCLQALSGVASPFYLIIDHLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LSSQKTQCKHQLASISSPVVTSLLINLGSPVKEVRRAAIQCLQALSGVASPFYLIIDHLI
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB9 SKAEEITSDAAYVIQDLATLFEELQREKKLKSHQKLSETLKNLLSCVYSCPSYIAKDLMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SKAEEITSDAAYVIQDLATLFEELQREKKLKSHQKLSETLKNLLSCVYSCPSYIAKDLMK
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB9 VLQGVNGEMVLSQLLPMAEQLLEKIQKEPTAVLKDEAMVLHLTLGKYNEFSVSLLNEDPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VLQGVNGEMVLSQLLPMAEQLLEKIQKEPTAVLKDEAMVLHLTLGKYNEFSVSLLNEDPK
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB9 SLDIFIKAVHTTKELYAGMPTIQITALEKITKPFFAAISDEKVQQKLLRMLFDLLVNCKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SLDIFIKAVHTTKELYAGMPTIQITALEKITKPFFAAISDEKVQQKLLRMLFDLLVNCKN
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB9 SHCAQTVSSVFKGISVNAEQVRIELEPPDKAKPLGTVQQKRRQKMQQKKSQDLESVQEVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SHCAQTVSSVFKGISVNAEQVRIELEPPDKAKPLGTVQQKRRQKMQQKKSQDLESVQEVG
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB9 GSYWQRVTLILELLQHKKKLRSPQILVPTLFNLLSRCLEPLPQEQGNMEYTKQLILSCLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GSYWQRVTLILELLQHKKKLRSPQILVPTLFNLLSRCLEPLPQEQGNMEYTKQLILSCLL
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB9 NICQKLSPDGGKIPKDILDEEKFNVELIVQCIRLSEMPQTHHHALLLLGTVAGIFPDKVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 NICQKLSPDGGKIPKDILDEEKFNVELIVQCIRLSEMPQTHHHALLLLGTVAGIFPDKVL
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KB9 HNIMSIFTFMGANVMRLDDTYSFQVINKTVKMVIPALIQSDSGDSIEVSRNVEEIVVKII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 HNIMSIFTFMGANVMRLDDTYSFQVINKTVKMVIPALIQSDSGDSIEVSRNVEEIVVKII
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KB9 SVFVDALPHVPEHRRLPILVQLVDTLGAEKFLWILLILLFEQYVTKTVLAAAYGEKDAIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SVFVDALPHVPEHRRLPILVQLVDTLGAEKFLWILLILLFEQYVTKTVLAAAYGEKDAIL
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KB9 EADTEFWFSVCCEFSVQHQIQSLMNILQYLLKLPEEKEETIPKAVSFNKSESQEEMLQVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EADTEFWFSVCCEFSVQHQIQSLMNILQYLLKLPEEKEETIPKAVSFNKSESQEEMLQVF
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KB9 NVETHTSKQLRHFKFLSVSFMSQLLSSNNFLKKVVESGGPEILKGLEERLLETVLGYISA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 NVETHTSKQLRHFKFLSVSFMSQLLSSNNFLKKVVESGGPEILKGLEERLLETVLGYISA
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KB9 VAQSMERNADKLTVKFWRALLSKAYDLLDKVNALLPTETFIPVIRGLVGNPLPSVRRKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VAQSMERNADKLTVKFWRALLSKAYDLLDKVNALLPTETFIPVIRGLVGNPLPSVRRKAL
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KB9 DLLNNKLQQNISWKKTIVTRFLKLVPDLLAIVQRKKKEGEEEQAINRQTALYTLKLLCKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DLLNNKLQQNISWKKTIVTRFLKLVPDLLAIVQRKKKEGEEEQAINRQTALYTLKLLCKN
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KB9 FGAENPDPFVPVLNTAVKLIAPERKEEKNVLGSALLCIAEVTSTLEALAIPQLPSLMPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 FGAENPDPFVPVLNTAVKLIAPERKEEKNVLGSALLCIAEVTSTLEALAIPQLPSLMPSL
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KB9 LTTMKNTSELVSSEVYLLSALAALQKVVETLPHFISPYLEGILSQVIHLEKITSEMGSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LTTMKNTSELVSSEVYLLSALAALQKVVETLPHFISPYLEGILSQVIHLEKITSEMGSAS
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KB9 QANIRLTSLKKTLATTLAPRVLLPAIKKTYKQIEKNWKNHMGPFMSILQEHIGVMKKEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QANIRLTSLKKTLATTLAPRVLLPAIKKTYKQIEKNWKNHMGPFMSILQEHIGVMKKEEL
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KB9 TSHQSQLTAFFLEALDFRAQHSENDLEEVGKTENCIIDCLVAMVVKLSEVTFRPLFFKLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TSHQSQLTAFFLEALDFRAQHSENDLEEVGKTENCIIDCLVAMVVKLSEVTFRPLFFKLF
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KB9 DWAKTEDAPKDRLLTFYNLADCIAEKLKGLFTLFAGHLVKPFADTLNQVNISKTDEAFFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DWAKTEDAPKDRLLTFYNLADCIAEKLKGLFTLFAGHLVKPFADTLNQVNISKTDEAFFD
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KB9 SENDPEKCCLLLQFILNCLYKIFLFDTQHFISKERAEALMMPLVDQLENRLGGEEKFQER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SENDPEKCCLLLQFILNCLYKIFLFDTQHFISKERAEALMMPLVDQLENRLGGEEKFQER
1990 2000 2010 2020 2030 2040
2050 2060 2070 2080 2090 2100
pF1KB9 VTKHLIPCIAQFSVAMADDSLWKPLNYQILLKTRDSSPKVRFAALITVLALAEKLKENYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VTKHLIPCIAQFSVAMADDSLWKPLNYQILLKTRDSSPKVRFAALITVLALAEKLKENYI
2050 2060 2070 2080 2090 2100
2110 2120 2130 2140
pF1KB9 VLLPESIPFLAELMEDECEEVEHQCQKTIQQLETVLGEPLQSYF
::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VLLPESIPFLAELMEDECEEVEHQCQKTIQQLETVLGEPLQSYF
2110 2120 2130 2140
2144 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 23:39:42 2016 done: Thu Nov 3 23:39:43 2016
Total Scan time: 4.320 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]