FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9446, 323 aa
  1>>>pF1KB9446 323 - 323 aa - 323 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8678+/-0.000843; mu= 14.9461+/- 0.051
 mean_var=104.2718+/-20.797, 0's: 0 Z-trim(109.7): 27  B-trim: 0 in 0/51
 Lambda= 0.125600
 statistics sampled from 11057 (11076) to 11057 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.713), E-opt: 0.2 (0.34), width:  16
 Scan time:  2.660

The best scores are:                                      opt bits E(32554)
CCDS32304.1 MORF4L1 gene_id:10933|Hs108|chr15      ( 323) 2170 403.4 1.2e-112
CCDS10307.1 MORF4L1 gene_id:10933|Hs108|chr15      ( 362) 1805 337.3 1.1e-92
CCDS58393.1 MORF4L1 gene_id:10933|Hs108|chr15      ( 235) 1548 290.6 8.3e-79
CCDS14512.1 MORF4L2 gene_id:9643|Hs108|chrX        ( 288) 1284 242.8 2.4e-64


>>CCDS32304.1 MORF4L1 gene_id:10933|Hs108|chr15           (323 aa)
 initn: 2170 init1: 2170 opt: 2170  Z-score: 2135.7  bits: 403.4 E(32554): 1.2e-112
Smith-Waterman score: 2170; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323)

               10        20        30        40        50        60
pF1KB9 MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPES
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 RVLKYVDTNLQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RVLKYVDTNLQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 LFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 QYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYLAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 QYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYLAK
              250       260       270       280       290       300

              310       320   
pF1KB9 NSATLFSASDYEVAPPEYHRKAV
       :::::::::::::::::::::::
CCDS32 NSATLFSASDYEVAPPEYHRKAV
              310       320   

>>CCDS10307.1 MORF4L1 gene_id:10933|Hs108|chr15           (362 aa)
 initn: 2150 init1: 1796 opt: 1805  Z-score: 1777.6  bits: 337.3 E(32554): 1.1e-92
Smith-Waterman score: 2023; 88.7% identity (89.0% similar) in 355 aa overlap (8-323:8-362)

               10        20        30        40        50          
pF1KB9 MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNK---------
              ::::::::::::::::::::::::::::::::::::::::::::         
CCDS10 MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKKSAVRPRRS
               10        20        30        40        50        60

                                            60        70        80 
pF1KB9 ------------------------------NWDEWVPESRVLKYVDTNLQKQRELQKANQ
                                     .:::::::::::::::::::::::::::::
CCDS10 EKSLKTHEDIVALFPVPEGAPSVHHPLLTSSWDEWVPESRVLKYVDTNLQKQRELQKANQ
               70        80        90       100       110       120

              90       100       110       120       130       140 
pF1KB9 EQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVD
              130       140       150       160       170       180

             150       160       170       180       190       200 
pF1KB9 PTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYK
              190       200       210       220       230       240

             210       220       230       240       250       260 
pF1KB9 KSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAP
              250       260       270       280       290       300

             270       280       290       300       310       320 
pF1KB9 HLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLFSASDYEVAPPEYHRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 HLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLFSASDYEVAPPEYHRK
              310       320       330       340       350       360

         
pF1KB9 AV
       ::
CCDS10 AV
         

>>CCDS58393.1 MORF4L1 gene_id:10933|Hs108|chr15           (235 aa)
 initn: 1548 init1: 1548 opt: 1548  Z-score: 1528.4  bits: 290.6 E(32554): 8.3e-79
Smith-Waterman score: 1548; 100.0% identity (100.0% similar) in 235 aa overlap (89-323:1-235)

       60        70        80        90       100       110        
pF1KB9 ESRVLKYVDTNLQKQRELQKANQEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTP
                                     ::::::::::::::::::::::::::::::
CCDS58                               MRGAAPGKKTSGLQQKNVEVKTKKNKQKTP
                                             10        20        30

      120       130       140       150       160       170        
pF1KB9 GNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQ
               40        50        60        70        80        90

      180       190       200       210       220       230        
pF1KB9 KQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFE
              100       110       120       130       140       150

      240       250       260       270       280       290        
pF1KB9 RPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYL
              160       170       180       190       200       210

      300       310       320   
pF1KB9 AKNSATLFSASDYEVAPPEYHRKAV
       :::::::::::::::::::::::::
CCDS58 AKNSATLFSASDYEVAPPEYHRKAV
              220       230     

>>CCDS14512.1 MORF4L2 gene_id:9643|Hs108|chrX             (288 aa)
 initn: 1387 init1: 1274 opt: 1284  Z-score: 1268.7  bits: 242.8 E(32554): 2.4e-64
Smith-Waterman score: 1328; 76.1% identity (87.9% similar) in 272 aa overlap (72-323:17-288)

              50        60        70        80        90       100 
pF1KB9 YFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQRELQKANQEQYAEGKMRGAAPGKKTSGL
                                     ......: .. .. ..:::::. ::::.: 
CCDS14               MSSRKQGSQPRGQQSAEEENFKKPTRSNMQRSKMRGASSGKKTAGP
                             10        20        30        40      

                                 110       120       130       140 
pF1KB9 QQKNVEV--------------------KTKKNKQKTPGNGDGGSTSETPQPPRKKRARVD
       ::::.:                     ::.:::::::::::::::::.::::::::::.:
CCDS14 QQKNLEPALPGRWGGRSAENPPSGSVRKTRKNKQKTPGNGDGGSTSEAPQPPRKKRARAD
         50        60        70        80        90       100      

             150       160       170       180       190       200 
pF1KB9 PTVENEETFMNRVEVKVKIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYK
       ::::.::.: ::.:::::::::::::::.::::.::::::: ::::::::.:::.::: :
CCDS14 PTVESEEAFKNRMEVKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANCK
        110       120       130       140       150       160      

             210       220       230       240       250       260 
pF1KB9 KSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILADHPDAPMSQVYGAP
       ::.::.:::::::::::::::::::::::::::::::::::::::  :::::::::::::
CCDS14 KSQGNVDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQYAEILLAHPDAPMSQVYGAP
        170       180       190       200       210       220      

             270       280       290       300       310       320 
pF1KB9 HLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLFSASDYEVAPPEYHRK
       :::::::::::::::::::::::::::.::::::::::::::.::.::::.::  :::::
CCDS14 HLLRLFVRIGAMLAYTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVASAEYHRK
        230       240       250       260       270       280      

         
pF1KB9 AV
       :.
CCDS14 AL
         




323 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 23:25:37 2016 done: Thu Nov  3 23:25:38 2016
 Total Scan time:  2.660 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]