Result of FASTA (omim) for
pF1KB9445
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9445, 672 aa
1>>>pF1KB9445 672 - 672 aa - 672 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.5410+/-0.00056; mu= -2.8164+/- 0.035
mean_var=752.7833+/-204.143, 0's: 0 Z-trim(117.1): 164 B-trim: 1750 in 1/56
Lambda= 0.046745
statistics sampled from 28648 (28815) to 28648 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.667), E-opt: 0.2 (0.338), width: 16
Scan time: 10.750
The best scores are: opt bits E(85289)
NP_006768 (OMIM: 300329) transcriptional regulator ( 672) 4391 312.9 2.5e-84
NP_001171671 (OMIM: 300329) transcriptional regula ( 672) 4391 312.9 2.5e-84
XP_006721627 (OMIM: 612308) PREDICTED: zinc finger (1013) 443 46.9 0.00044
XP_011522274 (OMIM: 612308) PREDICTED: zinc finger (1013) 443 46.9 0.00044
NP_065950 (OMIM: 612308) zinc finger and BTB domai (1013) 443 46.9 0.00044
XP_006721626 (OMIM: 612308) PREDICTED: zinc finger (1013) 443 46.9 0.00044
NP_001122305 (OMIM: 612308) zinc finger and BTB do (1013) 443 46.9 0.00044
XP_016861545 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
XP_016861547 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
XP_005247318 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
XP_016861544 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
XP_016861549 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
XP_016861550 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
XP_016861541 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
XP_016861548 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
XP_011510913 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
XP_016861543 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
XP_005247314 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
XP_005247315 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
XP_016861546 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
NP_001073881 (OMIM: 612218) zinc finger and BTB do (1195) 442 47.0 0.0005
XP_016861542 (OMIM: 612218) PREDICTED: zinc finger (1195) 442 47.0 0.0005
XP_005247313 (OMIM: 612218) PREDICTED: zinc finger (1196) 442 47.0 0.0005
XP_016861540 (OMIM: 612218) PREDICTED: zinc finger (1221) 442 47.0 0.0005
XP_011510909 (OMIM: 612218) PREDICTED: zinc finger (1221) 442 47.0 0.0005
XP_016861539 (OMIM: 612218) PREDICTED: zinc finger (1221) 442 47.0 0.0005
XP_011510910 (OMIM: 612218) PREDICTED: zinc finger (1221) 442 47.0 0.0005
XP_016884158 (OMIM: 607712) PREDICTED: hypermethyl ( 597) 392 43.1 0.0036
XP_011528311 (OMIM: 607712) PREDICTED: hypermethyl ( 615) 392 43.1 0.0037
XP_011528310 (OMIM: 607712) PREDICTED: hypermethyl ( 615) 392 43.1 0.0037
XP_011528312 (OMIM: 607712) PREDICTED: hypermethyl ( 615) 392 43.1 0.0037
XP_011528309 (OMIM: 607712) PREDICTED: hypermethyl ( 615) 392 43.1 0.0037
NP_055909 (OMIM: 607712) hypermethylated in cancer ( 615) 392 43.1 0.0037
>>NP_006768 (OMIM: 300329) transcriptional regulator Kai (672 aa)
initn: 4391 init1: 4391 opt: 4391 Z-score: 1634.9 bits: 312.9 E(85289): 2.5e-84
Smith-Waterman score: 4391; 100.0% identity (100.0% similar) in 672 aa overlap (1-672:1-672)
10 20 30 40 50 60
pF1KB9 MESRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MESRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 FSVAGQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAELGVPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 FSVAGQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAELGVPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SQVKSISGTAQDGNTEPLPPDSGDKNLVIQKSKDEAQDNGATIMPIITESFSLSAEDYEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SQVKSISGTAQDGNTEPLPPDSGDKNLVIQKSKDEAQDNGATIMPIITESFSLSAEDYEM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KKIIVTDSDDDDDDVIFCSEILPTKETLPSNNTVAQVQSNPGPVAISDVAPSASNNSPPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KKIIVTDSDDDDDDVIFCSEILPTKETLPSNNTVAQVQSNPGPVAISDVAPSASNNSPPL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TNITPTQKLPTPVNQATLSQTQGSEKLLVSSAPTHLTPNIILLNQTPLSTPPNVSSSLPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TNITPTQKLPTPVNQATLSQTQGSEKLLVSSAPTHLTPNIILLNQTPLSTPPNVSSSLPN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 HMPSSINLLVQNQQTPNSAILTGNKANEEEEEEIIDDDDDTISSSPDSAVSNTSLVPQAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 HMPSSINLLVQNQQTPNSAILTGNKANEEEEEEIIDDDDDTISSSPDSAVSNTSLVPQAD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TSQNTSFDGSLIQKMQIPTLLQEPLSNSLKISDIITRNTNDPGVGSKHLMEGQKIITLDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TSQNTSFDGSLIQKMQIPTLLQEPLSNSLKISDIITRNTNDPGVGSKHLMEGQKIITLDT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ATEIEGLSTGCKVYANIGEDTYDIVIPVKDDPDEGEARLENEIPKTSGSEMANKRMKVKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ATEIEGLSTGCKVYANIGEDTYDIVIPVKDDPDEGEARLENEIPKTSGSEMANKRMKVKH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 EIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 EIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 SDRSSTIPAMKDDGIGYKVDTGKEPPVGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SDRSSTIPAMKDDGIGYKVDTGKEPPVGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDG
610 620 630 640 650 660
670
pF1KB9 STEFEFIIPESY
::::::::::::
NP_006 STEFEFIIPESY
670
>>NP_001171671 (OMIM: 300329) transcriptional regulator (672 aa)
initn: 4391 init1: 4391 opt: 4391 Z-score: 1634.9 bits: 312.9 E(85289): 2.5e-84
Smith-Waterman score: 4391; 100.0% identity (100.0% similar) in 672 aa overlap (1-672:1-672)
10 20 30 40 50 60
pF1KB9 MESRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MESRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 FSVAGQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAELGVPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSVAGQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAELGVPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SQVKSISGTAQDGNTEPLPPDSGDKNLVIQKSKDEAQDNGATIMPIITESFSLSAEDYEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQVKSISGTAQDGNTEPLPPDSGDKNLVIQKSKDEAQDNGATIMPIITESFSLSAEDYEM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KKIIVTDSDDDDDDVIFCSEILPTKETLPSNNTVAQVQSNPGPVAISDVAPSASNNSPPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKIIVTDSDDDDDDVIFCSEILPTKETLPSNNTVAQVQSNPGPVAISDVAPSASNNSPPL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TNITPTQKLPTPVNQATLSQTQGSEKLLVSSAPTHLTPNIILLNQTPLSTPPNVSSSLPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TNITPTQKLPTPVNQATLSQTQGSEKLLVSSAPTHLTPNIILLNQTPLSTPPNVSSSLPN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 HMPSSINLLVQNQQTPNSAILTGNKANEEEEEEIIDDDDDTISSSPDSAVSNTSLVPQAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HMPSSINLLVQNQQTPNSAILTGNKANEEEEEEIIDDDDDTISSSPDSAVSNTSLVPQAD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 TSQNTSFDGSLIQKMQIPTLLQEPLSNSLKISDIITRNTNDPGVGSKHLMEGQKIITLDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSQNTSFDGSLIQKMQIPTLLQEPLSNSLKISDIITRNTNDPGVGSKHLMEGQKIITLDT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ATEIEGLSTGCKVYANIGEDTYDIVIPVKDDPDEGEARLENEIPKTSGSEMANKRMKVKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATEIEGLSTGCKVYANIGEDTYDIVIPVKDDPDEGEARLENEIPKTSGSEMANKRMKVKH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 EIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 SDRSSTIPAMKDDGIGYKVDTGKEPPVGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDRSSTIPAMKDDGIGYKVDTGKEPPVGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDG
610 620 630 640 650 660
670
pF1KB9 STEFEFIIPESY
::::::::::::
NP_001 STEFEFIIPESY
670
>>XP_006721627 (OMIM: 612308) PREDICTED: zinc finger and (1013 aa)
initn: 625 init1: 353 opt: 443 Z-score: 194.4 bits: 46.9 E(85289): 0.00044
Smith-Waterman score: 465; 41.9% identity (60.5% similar) in 172 aa overlap (482-637:297-467)
460 470 480 490 500 510
pF1KB9 PDEGEARLENEIPKTSGSEMANKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRR
.: .: :.: :.: .:.:::: :.::.:
XP_006 GLGAGGAGPGGPAGVDASALPPPVGFRGGPEHVVKVVGGHVLYVCAACERSYVTLSSLKR
270 280 290 300 310 320
520 530 540 550 560 570
pF1KB9 HFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKS
: :.:::..::::::::::: :::::::::. :::::::::. : ..:..: ...: ..
XP_006 HSNVHSWRRKYPCRYCEKVFALAEYRTKHEVWHTGERRYQCIFCWETFVTYYNLKTHQRA
330 340 350 360 370 380
580 590 600 610
pF1KB9 VHS---------QDPSGDSK-------LYRLHPCRSLQIRQYAYLSDRSSTIPAMKDDGI
:. . :.: : :::: : :. . : : :. . : .
XP_006 FHGISPGLLASEKTPNGGYKPKLNTLKLYRLLPMRAAK-RPYKTYSQGAPEAPLSPTLNT
390 400 410 420 430 440
620 630 640 650 660 670
pF1KB9 GYKVDTGKEPPVGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDGSTEFEFIIPESY
: :: : . . :
XP_006 PAPVAMPASPPPGPPPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGGGSGTASTGGSQAA
450 460 470 480 490 500
>>XP_011522274 (OMIM: 612308) PREDICTED: zinc finger and (1013 aa)
initn: 625 init1: 353 opt: 443 Z-score: 194.4 bits: 46.9 E(85289): 0.00044
Smith-Waterman score: 465; 41.9% identity (60.5% similar) in 172 aa overlap (482-637:297-467)
460 470 480 490 500 510
pF1KB9 PDEGEARLENEIPKTSGSEMANKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRR
.: .: :.: :.: .:.:::: :.::.:
XP_011 GLGAGGAGPGGPAGVDASALPPPVGFRGGPEHVVKVVGGHVLYVCAACERSYVTLSSLKR
270 280 290 300 310 320
520 530 540 550 560 570
pF1KB9 HFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKS
: :.:::..::::::::::: :::::::::. :::::::::. : ..:..: ...: ..
XP_011 HSNVHSWRRKYPCRYCEKVFALAEYRTKHEVWHTGERRYQCIFCWETFVTYYNLKTHQRA
330 340 350 360 370 380
580 590 600 610
pF1KB9 VHS---------QDPSGDSK-------LYRLHPCRSLQIRQYAYLSDRSSTIPAMKDDGI
:. . :.: : :::: : :. . : : :. . : .
XP_011 FHGISPGLLASEKTPNGGYKPKLNTLKLYRLLPMRAAK-RPYKTYSQGAPEAPLSPTLNT
390 400 410 420 430 440
620 630 640 650 660 670
pF1KB9 GYKVDTGKEPPVGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDGSTEFEFIIPESY
: :: : . . :
XP_011 PAPVAMPASPPPGPPPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGGGSGTASTGGSQAA
450 460 470 480 490 500
>>NP_065950 (OMIM: 612308) zinc finger and BTB domain-co (1013 aa)
initn: 625 init1: 353 opt: 443 Z-score: 194.4 bits: 46.9 E(85289): 0.00044
Smith-Waterman score: 465; 41.9% identity (60.5% similar) in 172 aa overlap (482-637:297-467)
460 470 480 490 500 510
pF1KB9 PDEGEARLENEIPKTSGSEMANKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRR
.: .: :.: :.: .:.:::: :.::.:
NP_065 GLGAGGAGPGGPAGVDASALPPPVGFRGGPEHVVKVVGGHVLYVCAACERSYVTLSSLKR
270 280 290 300 310 320
520 530 540 550 560 570
pF1KB9 HFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKS
: :.:::..::::::::::: :::::::::. :::::::::. : ..:..: ...: ..
NP_065 HSNVHSWRRKYPCRYCEKVFALAEYRTKHEVWHTGERRYQCIFCWETFVTYYNLKTHQRA
330 340 350 360 370 380
580 590 600 610
pF1KB9 VHS---------QDPSGDSK-------LYRLHPCRSLQIRQYAYLSDRSSTIPAMKDDGI
:. . :.: : :::: : :. . : : :. . : .
NP_065 FHGISPGLLASEKTPNGGYKPKLNTLKLYRLLPMRAAK-RPYKTYSQGAPEAPLSPTLNT
390 400 410 420 430 440
620 630 640 650 660 670
pF1KB9 GYKVDTGKEPPVGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDGSTEFEFIIPESY
: :: : . . :
NP_065 PAPVAMPASPPPGPPPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGGGSGTASTGGSQAA
450 460 470 480 490 500
>>XP_006721626 (OMIM: 612308) PREDICTED: zinc finger and (1013 aa)
initn: 625 init1: 353 opt: 443 Z-score: 194.4 bits: 46.9 E(85289): 0.00044
Smith-Waterman score: 465; 41.9% identity (60.5% similar) in 172 aa overlap (482-637:297-467)
460 470 480 490 500 510
pF1KB9 PDEGEARLENEIPKTSGSEMANKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRR
.: .: :.: :.: .:.:::: :.::.:
XP_006 GLGAGGAGPGGPAGVDASALPPPVGFRGGPEHVVKVVGGHVLYVCAACERSYVTLSSLKR
270 280 290 300 310 320
520 530 540 550 560 570
pF1KB9 HFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKS
: :.:::..::::::::::: :::::::::. :::::::::. : ..:..: ...: ..
XP_006 HSNVHSWRRKYPCRYCEKVFALAEYRTKHEVWHTGERRYQCIFCWETFVTYYNLKTHQRA
330 340 350 360 370 380
580 590 600 610
pF1KB9 VHS---------QDPSGDSK-------LYRLHPCRSLQIRQYAYLSDRSSTIPAMKDDGI
:. . :.: : :::: : :. . : : :. . : .
XP_006 FHGISPGLLASEKTPNGGYKPKLNTLKLYRLLPMRAAK-RPYKTYSQGAPEAPLSPTLNT
390 400 410 420 430 440
620 630 640 650 660 670
pF1KB9 GYKVDTGKEPPVGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDGSTEFEFIIPESY
: :: : . . :
XP_006 PAPVAMPASPPPGPPPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGGGSGTASTGGSQAA
450 460 470 480 490 500
>>NP_001122305 (OMIM: 612308) zinc finger and BTB domain (1013 aa)
initn: 625 init1: 353 opt: 443 Z-score: 194.4 bits: 46.9 E(85289): 0.00044
Smith-Waterman score: 465; 41.9% identity (60.5% similar) in 172 aa overlap (482-637:297-467)
460 470 480 490 500 510
pF1KB9 PDEGEARLENEIPKTSGSEMANKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRR
.: .: :.: :.: .:.:::: :.::.:
NP_001 GLGAGGAGPGGPAGVDASALPPPVGFRGGPEHVVKVVGGHVLYVCAACERSYVTLSSLKR
270 280 290 300 310 320
520 530 540 550 560 570
pF1KB9 HFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKS
: :.:::..::::::::::: :::::::::. :::::::::. : ..:..: ...: ..
NP_001 HSNVHSWRRKYPCRYCEKVFALAEYRTKHEVWHTGERRYQCIFCWETFVTYYNLKTHQRA
330 340 350 360 370 380
580 590 600 610
pF1KB9 VHS---------QDPSGDSK-------LYRLHPCRSLQIRQYAYLSDRSSTIPAMKDDGI
:. . :.: : :::: : :. . : : :. . : .
NP_001 FHGISPGLLASEKTPNGGYKPKLNTLKLYRLLPMRAAK-RPYKTYSQGAPEAPLSPTLNT
390 400 410 420 430 440
620 630 640 650 660 670
pF1KB9 GYKVDTGKEPPVGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDGSTEFEFIIPESY
: :: : . . :
NP_001 PAPVAMPASPPPGPPPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGGGSGTASTGGSQAA
450 460 470 480 490 500
>>XP_016861545 (OMIM: 612218) PREDICTED: zinc finger and (1195 aa)
initn: 756 init1: 442 opt: 442 Z-score: 193.4 bits: 47.0 E(85289): 0.0005
Smith-Waterman score: 786; 30.3% identity (58.9% similar) in 633 aa overlap (14-613:15-592)
10 20 30 40 50
pF1KB9 MESRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQ
.: ..:. ::::: .:..::::.:::: ::.::.:.:.::: ::..
XP_016 MTVMSLSRDLKDDFHSDTVLSILNEQRIRGILCDVTIIVEDTKFKAHSNVLAASSLYFKN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 LF-----SVAGQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIA
.: ....:.::. ..::.:.::::::::: .: :.. . .: .:. ::..:.
XP_016 IFWSHTICISSHVLELDDLKAEVFTEILNYIYSSTVVVKRQETVTDLAAAGKKLGISFLE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 ELGVPLSQVKSISGTAQDGNTEPLPPD-SGDKNLVIQKSKDEAQDNGATIM--PIITESF
.: : .. .. : : .. :... :.: . . .: : ::..:
XP_016 DL------------TDRNFSNSPGPYVFCITEKGVVKEEKNEKRHEEPAITNGPRITNAF
130 140 150 160
180 190 200 210 220
pF1KB9 SLSAEDYEMKKIIVTDSDDDDDDVIFCSEILPT--KETLPSNNTVAQVQSNPGPVAISDV
: :: :..... .: : . :.. : :.. ..
XP_016 S----------IIETENSNN----MFSPLDLRASFKKVSDSMRTASLCLERTDVCHEAEP
170 180 190 200 210
230 240 250 260 270 280
pF1KB9 APSASNNSPPLTNITPTQK-LPTPVNQATLSQTQGSEKLLVSSAPTHLTPNIILLNQTPL
. . ...: ..... . . :. .... . :.:. . .: :. .: .
XP_016 VRTLAEHSYAVSSVAEAYRSQPVREHDGSSPGNTGKENCEALAAK----PKTCRKPKT-F
220 230 240 250 260
290 300 310 320 330 340
pF1KB9 STPPNVSSSLPNHMPSSI-NLLVQNQQTPN-SAILTGNKA-NEEEEEEIIDDDDDTISSS
: : . .:. : : . :: :.....:. .:.:: .:. :.: . .. .:.. :.
XP_016 SIPQDSDSATENIPPPPVSNLEVNQERSPQPAAVLTRSKSPNNEGDVHFSREDENQSSDV
270 280 290 300 310 320
350 360 370 380 390 400
pF1KB9 PDSAVSNTSLVPQADTSQNTSFDGS--LIQKMQIPTLLQEPLSNSLKISDIITRNTNDPG
: .... . . . .::.: : .::. :::: . ... : : :
XP_016 PGPPAAEVPPLVYNCSCCSKAFDSSTLLSAHMQLHKPTQEPLVCKYCNKQFTTLNRLD--
330 340 350 360 370 380
410 420 430 440 450 460
pF1KB9 VGSKHLMEGQKIITLDTATEIEGLSTGC-KVYANIGEDTYDIVIPVKDDPDEGEARLENE
.: ..: .. : : . . : .::.. ... : .: .: :. .:
XP_016 ---RH----EQICMRSSHMPIPGGNQRFLENYPTIGQNGGSFTGP---EPLLSENRI-GE
390 400 410 420 430
470 480 490 500 510 520
pF1KB9 IPKTSGSEMANKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKY
. ...:: . . ::. .:.:.. : :.::::::: :.::::: :.:::.. :
XP_016 F-SSTGSTLPDT-------DHMVKFVNGQMLYSCVVCKRSYVTLSSLRRHANVHSWRRTY
440 450 460 470 480
530 540 550 560 570
pF1KB9 PCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQD------
::.::.::: ::::::.::: :::::::::. : ..:..: ....: :: :. :
XP_016 PCHYCNKVFALAEYRTRHEIWHTGERRYQCIFCLETFMTYYILKNHQKSFHAIDHRLSIS
490 500 510 520 530 540
580 590 600 610 620
pF1KB9 ---------PS-GDSKLYRLHPCRSLQIRQYAYLSDRSSTIPAMKDDGIGYKVDTGKEPP
:: ::::: : .. .. : : :.:. ...
XP_016 KKTANGGLKPSVYPYKLYRLLP---MKCKRAPYKSYRNSSYENARENSQMNESAPGTYVV
550 560 570 580 590 600
630 640 650 660 670
pF1KB9 VGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDGSTEFEFIIPESY
XP_016 QNPHSSELPTLNFQDTVNTLTNSPAIPLETSACQDIPTSANVQNAEGTKWGEEALKMDLD
610 620 630 640 650 660
>>XP_016861547 (OMIM: 612218) PREDICTED: zinc finger and (1195 aa)
initn: 756 init1: 442 opt: 442 Z-score: 193.4 bits: 47.0 E(85289): 0.0005
Smith-Waterman score: 786; 30.3% identity (58.9% similar) in 633 aa overlap (14-613:15-592)
10 20 30 40 50
pF1KB9 MESRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQ
.: ..:. ::::: .:..::::.:::: ::.::.:.:.::: ::..
XP_016 MTVMSLSRDLKDDFHSDTVLSILNEQRIRGILCDVTIIVEDTKFKAHSNVLAASSLYFKN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 LF-----SVAGQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIA
.: ....:.::. ..::.:.::::::::: .: :.. . .: .:. ::..:.
XP_016 IFWSHTICISSHVLELDDLKAEVFTEILNYIYSSTVVVKRQETVTDLAAAGKKLGISFLE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 ELGVPLSQVKSISGTAQDGNTEPLPPD-SGDKNLVIQKSKDEAQDNGATIM--PIITESF
.: : .. .. : : .. :... :.: . . .: : ::..:
XP_016 DL------------TDRNFSNSPGPYVFCITEKGVVKEEKNEKRHEEPAITNGPRITNAF
130 140 150 160
180 190 200 210 220
pF1KB9 SLSAEDYEMKKIIVTDSDDDDDDVIFCSEILPT--KETLPSNNTVAQVQSNPGPVAISDV
: :: :..... .: : . :.. : :.. ..
XP_016 S----------IIETENSNN----MFSPLDLRASFKKVSDSMRTASLCLERTDVCHEAEP
170 180 190 200 210
230 240 250 260 270 280
pF1KB9 APSASNNSPPLTNITPTQK-LPTPVNQATLSQTQGSEKLLVSSAPTHLTPNIILLNQTPL
. . ...: ..... . . :. .... . :.:. . .: :. .: .
XP_016 VRTLAEHSYAVSSVAEAYRSQPVREHDGSSPGNTGKENCEALAAK----PKTCRKPKT-F
220 230 240 250 260
290 300 310 320 330 340
pF1KB9 STPPNVSSSLPNHMPSSI-NLLVQNQQTPN-SAILTGNKA-NEEEEEEIIDDDDDTISSS
: : . .:. : : . :: :.....:. .:.:: .:. :.: . .. .:.. :.
XP_016 SIPQDSDSATENIPPPPVSNLEVNQERSPQPAAVLTRSKSPNNEGDVHFSREDENQSSDV
270 280 290 300 310 320
350 360 370 380 390 400
pF1KB9 PDSAVSNTSLVPQADTSQNTSFDGS--LIQKMQIPTLLQEPLSNSLKISDIITRNTNDPG
: .... . . . .::.: : .::. :::: . ... : : :
XP_016 PGPPAAEVPPLVYNCSCCSKAFDSSTLLSAHMQLHKPTQEPLVCKYCNKQFTTLNRLD--
330 340 350 360 370 380
410 420 430 440 450 460
pF1KB9 VGSKHLMEGQKIITLDTATEIEGLSTGC-KVYANIGEDTYDIVIPVKDDPDEGEARLENE
.: ..: .. : : . . : .::.. ... : .: .: :. .:
XP_016 ---RH----EQICMRSSHMPIPGGNQRFLENYPTIGQNGGSFTGP---EPLLSENRI-GE
390 400 410 420 430
470 480 490 500 510 520
pF1KB9 IPKTSGSEMANKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKY
. ...:: . . ::. .:.:.. : :.::::::: :.::::: :.:::.. :
XP_016 F-SSTGSTLPDT-------DHMVKFVNGQMLYSCVVCKRSYVTLSSLRRHANVHSWRRTY
440 450 460 470 480
530 540 550 560 570
pF1KB9 PCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQD------
::.::.::: ::::::.::: :::::::::. : ..:..: ....: :: :. :
XP_016 PCHYCNKVFALAEYRTRHEIWHTGERRYQCIFCLETFMTYYILKNHQKSFHAIDHRLSIS
490 500 510 520 530 540
580 590 600 610 620
pF1KB9 ---------PS-GDSKLYRLHPCRSLQIRQYAYLSDRSSTIPAMKDDGIGYKVDTGKEPP
:: ::::: : .. .. : : :.:. ...
XP_016 KKTANGGLKPSVYPYKLYRLLP---MKCKRAPYKSYRNSSYENARENSQMNESAPGTYVV
550 560 570 580 590 600
630 640 650 660 670
pF1KB9 VGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDGSTEFEFIIPESY
XP_016 QNPHSSELPTLNFQDTVNTLTNSPAIPLETSACQDIPTSANVQNAEGTKWGEEALKMDLD
610 620 630 640 650 660
>>XP_005247318 (OMIM: 612218) PREDICTED: zinc finger and (1195 aa)
initn: 756 init1: 442 opt: 442 Z-score: 193.4 bits: 47.0 E(85289): 0.0005
Smith-Waterman score: 786; 30.3% identity (58.9% similar) in 633 aa overlap (14-613:15-592)
10 20 30 40 50
pF1KB9 MESRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQ
.: ..:. ::::: .:..::::.:::: ::.::.:.:.::: ::..
XP_005 MTVMSLSRDLKDDFHSDTVLSILNEQRIRGILCDVTIIVEDTKFKAHSNVLAASSLYFKN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 LF-----SVAGQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIA
.: ....:.::. ..::.:.::::::::: .: :.. . .: .:. ::..:.
XP_005 IFWSHTICISSHVLELDDLKAEVFTEILNYIYSSTVVVKRQETVTDLAAAGKKLGISFLE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 ELGVPLSQVKSISGTAQDGNTEPLPPD-SGDKNLVIQKSKDEAQDNGATIM--PIITESF
.: : .. .. : : .. :... :.: . . .: : ::..:
XP_005 DL------------TDRNFSNSPGPYVFCITEKGVVKEEKNEKRHEEPAITNGPRITNAF
130 140 150 160
180 190 200 210 220
pF1KB9 SLSAEDYEMKKIIVTDSDDDDDDVIFCSEILPT--KETLPSNNTVAQVQSNPGPVAISDV
: :: :..... .: : . :.. : :.. ..
XP_005 S----------IIETENSNN----MFSPLDLRASFKKVSDSMRTASLCLERTDVCHEAEP
170 180 190 200 210
230 240 250 260 270 280
pF1KB9 APSASNNSPPLTNITPTQK-LPTPVNQATLSQTQGSEKLLVSSAPTHLTPNIILLNQTPL
. . ...: ..... . . :. .... . :.:. . .: :. .: .
XP_005 VRTLAEHSYAVSSVAEAYRSQPVREHDGSSPGNTGKENCEALAAK----PKTCRKPKT-F
220 230 240 250 260
290 300 310 320 330 340
pF1KB9 STPPNVSSSLPNHMPSSI-NLLVQNQQTPN-SAILTGNKA-NEEEEEEIIDDDDDTISSS
: : . .:. : : . :: :.....:. .:.:: .:. :.: . .. .:.. :.
XP_005 SIPQDSDSATENIPPPPVSNLEVNQERSPQPAAVLTRSKSPNNEGDVHFSREDENQSSDV
270 280 290 300 310 320
350 360 370 380 390 400
pF1KB9 PDSAVSNTSLVPQADTSQNTSFDGS--LIQKMQIPTLLQEPLSNSLKISDIITRNTNDPG
: .... . . . .::.: : .::. :::: . ... : : :
XP_005 PGPPAAEVPPLVYNCSCCSKAFDSSTLLSAHMQLHKPTQEPLVCKYCNKQFTTLNRLD--
330 340 350 360 370 380
410 420 430 440 450 460
pF1KB9 VGSKHLMEGQKIITLDTATEIEGLSTGC-KVYANIGEDTYDIVIPVKDDPDEGEARLENE
.: ..: .. : : . . : .::.. ... : .: .: :. .:
XP_005 ---RH----EQICMRSSHMPIPGGNQRFLENYPTIGQNGGSFTGP---EPLLSENRI-GE
390 400 410 420 430
470 480 490 500 510 520
pF1KB9 IPKTSGSEMANKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKY
. ...:: . . ::. .:.:.. : :.::::::: :.::::: :.:::.. :
XP_005 F-SSTGSTLPDT-------DHMVKFVNGQMLYSCVVCKRSYVTLSSLRRHANVHSWRRTY
440 450 460 470 480
530 540 550 560 570
pF1KB9 PCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQD------
::.::.::: ::::::.::: :::::::::. : ..:..: ....: :: :. :
XP_005 PCHYCNKVFALAEYRTRHEIWHTGERRYQCIFCLETFMTYYILKNHQKSFHAIDHRLSIS
490 500 510 520 530 540
580 590 600 610 620
pF1KB9 ---------PS-GDSKLYRLHPCRSLQIRQYAYLSDRSSTIPAMKDDGIGYKVDTGKEPP
:: ::::: : .. .. : : :.:. ...
XP_005 KKTANGGLKPSVYPYKLYRLLP---MKCKRAPYKSYRNSSYENARENSQMNESAPGTYVV
550 560 570 580 590 600
630 640 650 660 670
pF1KB9 VGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDGSTEFEFIIPESY
XP_005 QNPHSSELPTLNFQDTVNTLTNSPAIPLETSACQDIPTSANVQNAEGTKWGEEALKMDLD
610 620 630 640 650 660
672 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:03:37 2016 done: Fri Nov 4 17:03:39 2016
Total Scan time: 10.750 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]