FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9445, 672 aa
  1>>>pF1KB9445 672 - 672 aa - 672 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 13.6114+/-0.00157; mu= -21.3288+/- 0.090
 mean_var=661.2468+/-179.663, 0's: 0 Z-trim(109.1): 243  B-trim: 528 in 1/50
 Lambda= 0.049876
 statistics sampled from 10554 (10681) to 10554 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.663), E-opt: 0.2 (0.328), width:  16
 Scan time:  4.090

The best scores are:                                      opt bits E(32554)
CCDS14596.1 ZBTB33 gene_id:10009|Hs108|chrX        ( 672) 4391 332.3 1.3e-90


>>CCDS14596.1 ZBTB33 gene_id:10009|Hs108|chrX             (672 aa)
 initn: 4391 init1: 4391 opt: 4391  Z-score: 1740.1  bits: 332.3 E(32554): 1.3e-90
Smith-Waterman score: 4391; 100.0% identity (100.0% similar) in 672 aa overlap (1-672:1-672)

               10        20        30        40        50        60
pF1KB9 MESRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MESRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 FSVAGQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAELGVPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FSVAGQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAELGVPL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 SQVKSISGTAQDGNTEPLPPDSGDKNLVIQKSKDEAQDNGATIMPIITESFSLSAEDYEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SQVKSISGTAQDGNTEPLPPDSGDKNLVIQKSKDEAQDNGATIMPIITESFSLSAEDYEM
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 KKIIVTDSDDDDDDVIFCSEILPTKETLPSNNTVAQVQSNPGPVAISDVAPSASNNSPPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KKIIVTDSDDDDDDVIFCSEILPTKETLPSNNTVAQVQSNPGPVAISDVAPSASNNSPPL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 TNITPTQKLPTPVNQATLSQTQGSEKLLVSSAPTHLTPNIILLNQTPLSTPPNVSSSLPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TNITPTQKLPTPVNQATLSQTQGSEKLLVSSAPTHLTPNIILLNQTPLSTPPNVSSSLPN
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 HMPSSINLLVQNQQTPNSAILTGNKANEEEEEEIIDDDDDTISSSPDSAVSNTSLVPQAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HMPSSINLLVQNQQTPNSAILTGNKANEEEEEEIIDDDDDTISSSPDSAVSNTSLVPQAD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 TSQNTSFDGSLIQKMQIPTLLQEPLSNSLKISDIITRNTNDPGVGSKHLMEGQKIITLDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TSQNTSFDGSLIQKMQIPTLLQEPLSNSLKISDIITRNTNDPGVGSKHLMEGQKIITLDT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 ATEIEGLSTGCKVYANIGEDTYDIVIPVKDDPDEGEARLENEIPKTSGSEMANKRMKVKH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ATEIEGLSTGCKVYANIGEDTYDIVIPVKDDPDEGEARLENEIPKTSGSEMANKRMKVKH
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB9 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKH
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB9 EIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYL
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB9 SDRSSTIPAMKDDGIGYKVDTGKEPPVGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SDRSSTIPAMKDDGIGYKVDTGKEPPVGTTTSTQNKPMTWEDIFIQQENDSIFKQNVTDG
              610       620       630       640       650       660

              670  
pF1KB9 STEFEFIIPESY
       ::::::::::::
CCDS14 STEFEFIIPESY
              670  




672 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 17:03:36 2016 done: Fri Nov  4 17:03:37 2016
 Total Scan time:  4.090 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]