Result of FASTA (ccds) for
pF1KB9435
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9435, 216 aa
1>>>pF1KB9435 216 - 216 aa - 216 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2824+/-0.000789; mu= 13.1569+/- 0.047
mean_var=54.8427+/-11.114, 0's: 0 Z-trim(105.5): 20 B-trim: 0 in 0/49
Lambda= 0.173187
statistics sampled from 8443 (8461) to 8443 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.26), width: 16
Scan time: 1.940
The best scores are: opt bits E(32554)
CCDS46340.1 MOB1A gene_id:55233|Hs108|chr2 ( 216) 1439 367.4 3.7e-102
CCDS34002.1 MOB1B gene_id:92597|Hs108|chr4 ( 216) 1391 355.5 1.5e-98
CCDS58903.1 MOB1B gene_id:92597|Hs108|chr4 ( 221) 1379 352.5 1.2e-97
CCDS12081.1 MOB3A gene_id:126308|Hs108|chr19 ( 217) 841 218.0 3.5e-57
CCDS6520.1 MOB3B gene_id:79817|Hs108|chr9 ( 216) 835 216.5 1e-56
CCDS540.1 MOB3C gene_id:148932|Hs108|chr1 ( 216) 829 215.0 2.8e-56
CCDS539.1 MOB3C gene_id:148932|Hs108|chr1 ( 268) 829 215.1 3.4e-56
CCDS53591.1 MOB2 gene_id:81532|Hs108|chr11 ( 268) 551 145.6 2.8e-35
>>CCDS46340.1 MOB1A gene_id:55233|Hs108|chr2 (216 aa)
initn: 1439 init1: 1439 opt: 1439 Z-score: 1947.5 bits: 367.4 E(32554): 3.7e-102
Smith-Waterman score: 1439; 98.6% identity (99.1% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KB9 MLFYLSSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSGNLRQAVMLPEGEDLNEWIAVN
: : .:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSFLFSSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSGNLRQAVMLPEGEDLNEWIAVN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 TVDFFNQINMLYGTITEFCTEASCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDYLMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TVDFFNQINMLYGTITEFCTEASCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDYLMT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 WVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEEAHLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 WVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEEAHLN
130 140 150 160 170 180
190 200 210
pF1KB9 TSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR
::::::::::::::::::::::::::::::::::::
CCDS46 TSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR
190 200 210
>>CCDS34002.1 MOB1B gene_id:92597|Hs108|chr4 (216 aa)
initn: 1391 init1: 1391 opt: 1391 Z-score: 1882.7 bits: 355.5 E(32554): 1.5e-98
Smith-Waterman score: 1391; 94.4% identity (97.7% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KB9 MLFYLSSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSGNLRQAVMLPEGEDLNEWIAVN
: : ..::::::::::::::::::::::::::::::::::::.:::::::::::::.:::
CCDS34 MSFLFGSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSGNLRMAVMLPEGEDLNEWVAVN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 TVDFFNQINMLYGTITEFCTEASCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDYLMT
::::::::::::::::.:::: :::::::::.::::::::::::::::::::::::::::
CCDS34 TVDFFNQINMLYGTITDFCTEESCPVMSAGPKYEYHWADGTNIKKPIKCSAPKYIDYLMT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 WVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEEAHLN
:::::::::::::::::::::::::::::::::::::::::::::::: :.:::::::::
CCDS34 WVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDPVIQLQEEAHLN
130 140 150 160 170 180
190 200 210
pF1KB9 TSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR
::::::::::::::::::::::::::::::: ::::
CCDS34 TSFKHFIFFVQEFNLIDRRELAPLQELIEKLTSKDR
190 200 210
>>CCDS58903.1 MOB1B gene_id:92597|Hs108|chr4 (221 aa)
initn: 1379 init1: 1379 opt: 1379 Z-score: 1866.3 bits: 352.5 E(32554): 1.2e-97
Smith-Waterman score: 1379; 96.2% identity (98.6% similar) in 210 aa overlap (7-216:12-221)
10 20 30 40 50
pF1KB9 MLFYLSSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSGNLRQAVMLPEGEDLNE
::::::::::::::::::::::::::::::::::::.::::::::::::
CCDS58 MEGATDVNESGSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSGNLRMAVMLPEGEDLNE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 WIAVNTVDFFNQINMLYGTITEFCTEASCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYI
:.:::::::::::::::::::.:::: :::::::::.:::::::::::::::::::::::
CCDS58 WVAVNTVDFFNQINMLYGTITDFCTEESCPVMSAGPKYEYHWADGTNIKKPIKCSAPKYI
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 DYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::: :.::::
CCDS58 DYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDPVIQLQE
130 140 150 160 170 180
180 190 200 210
pF1KB9 EAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR
:::::::::::::::::::::::::::::::::::: ::::
CCDS58 EAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLTSKDR
190 200 210 220
>>CCDS12081.1 MOB3A gene_id:126308|Hs108|chr19 (217 aa)
initn: 858 init1: 754 opt: 841 Z-score: 1140.0 bits: 218.0 E(32554): 3.5e-57
Smith-Waterman score: 841; 53.5% identity (85.1% similar) in 202 aa overlap (11-211:14-215)
10 20 30 40 50
pF1KB9 MLFYLSSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSG-NLRQAVMLPEGEDLNEW
:::.::... :....:: :.:.:.:..: .:: ::.:: :::::.:
CCDS12 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDW
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 IAVNTVDFFNQINMLYGTITEFCTEASCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYID
.::..:::::..:..::::.. ::: ::::::.::.:::.: : ...:: :::.:.:
CCDS12 VAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMD
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 YLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEE
:: :.. :...: :::...:.::::::..... ::.:::::..:.: .::: . :. :
CCDS12 LLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSE
130 140 150 160 170 180
180 190 200 210
pF1KB9 AHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR
::.:: .::: .::.::.::: .:: ::.:. ..
CCDS12 AHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH
190 200 210
>>CCDS6520.1 MOB3B gene_id:79817|Hs108|chr9 (216 aa)
initn: 845 init1: 737 opt: 835 Z-score: 1131.9 bits: 216.5 E(32554): 1e-56
Smith-Waterman score: 835; 54.5% identity (82.2% similar) in 202 aa overlap (11-211:13-214)
10 20 30 40 50
pF1KB9 MLFYLSSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSG-NLRQAVMLPEGEDLNEWI
:::.::... :....:: :.:.:.:.:: .:. ::.:: ::: :.:.
CCDS65 MSIALKQVFNKDKTFRPKRKFEPGTQRFELHKRAQASLNSGVDLKAAVQLPSGEDQNDWV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 AVNTVDFFNQINMLYGTITEFCTEASCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDY
::..:::::.::..:::: ::::: .:::::.::.:::.: : . ::: ::.:..
CCDS65 AVHVVDFFNRINLIYGTICEFCTERTCPVMSGGPKYEYRWQDDLKYKKPTALPAPQYMNL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 LMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEEA
:: :.. :...: .::. .::::::::... : :: :::::..:.: .::: :. . ::
CCDS65 LMDWIEVQINNEEIFPTCVGVPFPKNFLQICKKILCRLFRVFVHVYIHHFDRVIVMGAEA
130 140 150 160 170 180
180 190 200 210
pF1KB9 HLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR
:.:: .::: .:: :.:::::.:: ::.:. ..
CCDS65 HVNTCYKHFYYFVTEMNLIDRKELEPLKEMTSRMCH
190 200 210
>>CCDS540.1 MOB3C gene_id:148932|Hs108|chr1 (216 aa)
initn: 825 init1: 739 opt: 829 Z-score: 1123.8 bits: 215.0 E(32554): 2.8e-56
Smith-Waterman score: 829; 52.5% identity (84.2% similar) in 202 aa overlap (11-211:13-214)
10 20 30 40 50
pF1KB9 MLFYLSSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSG-NLRQAVMLPEGEDLNEWI
:::.:.: . :....:: :.:.:.: :: .::..: :: ::....::
CCDS54 MALCLKQVFAKDKTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDWI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 AVNTVDFFNQINMLYGTITEFCTEASCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDY
::..:::::.::..:::..: :.:.:::::..::::::.: : . ..: : :::.:.
CCDS54 AVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMAL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 LMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEEA
:: :.. ..:: .::...::::::::..: :: :::::..:.: .::::.... ::
CCDS54 LMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAEA
130 140 150 160 170 180
180 190 200 210
pF1KB9 HLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR
:.:: .::: .:..::.:.:.::: ::.:. :..
CCDS54 HVNTCYKHFYYFIREFSLVDQRELEPLREMTERICH
190 200 210
>>CCDS539.1 MOB3C gene_id:148932|Hs108|chr1 (268 aa)
initn: 825 init1: 739 opt: 829 Z-score: 1122.3 bits: 215.1 E(32554): 3.4e-56
Smith-Waterman score: 829; 52.5% identity (84.2% similar) in 202 aa overlap (11-211:65-266)
10 20 30
pF1KB9 MLFYLSSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSG-
:::.:.: . :....:: :.:.:.: ::
CCDS53 IWYPQVRAPGQQPQAQLAMALCLKQVFAKDKTFRPRKRFEPGTQRFELYKKAQASLKSGL
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB9 NLRQAVMLPEGEDLNEWIAVNTVDFFNQINMLYGTITEFCTEASCPVMSAGPRYEYHWAD
.::..: :: ::....::::..:::::.::..:::..: :.:.:::::..::::::.: :
CCDS53 DLRSVVRLPPGENIDDWIAVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQD
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB9 GTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVY
. ..: : :::.:. :: :.. ..:: .::...::::::::..: :: :::::.
CCDS53 ERQYRRPAKLSAPRYMALLMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVF
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB9 AHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR
.:.: .::::.... :::.:: .::: .:..::.:.:.::: ::.:. :..
CCDS53 VHVYIHHFDSILSMGAEAHVNTCYKHFYYFIREFSLVDQRELEPLREMTERICH
220 230 240 250 260
>>CCDS53591.1 MOB2 gene_id:81532|Hs108|chr11 (268 aa)
initn: 494 init1: 342 opt: 551 Z-score: 746.9 bits: 145.6 E(32554): 2.8e-35
Smith-Waterman score: 551; 42.3% identity (71.2% similar) in 208 aa overlap (8-213:37-240)
10 20 30
pF1KB9 MLFYLSSRSSKTFKP--KKNIPEGSHQYELLKHAEAT
:.::. :: :: : . : .:..:
CCDS53 SLPEDQARPGQSLQSGLCCKMVLQAVSKVLRKSKA-KPNGKKPAAEERKAYLEPEHTKAR
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB9 LGSGNLRQAVMLPEGEDLNEWIAVNTVDFFNQINMLYGTITEFCTEASCPVMSAGPRYEY
. . .... :.::. :::::.: ::. ::..::. :.::.:::: .: .:.. .:
CCDS53 ITDFQFKELVVLPREIDLNEWLASNTTTFFHHINLQYSTISEFCTGETCQTMAVC-NTQY
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB9 HWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRL
.: : . : .::.::.:.:..:. :: . :: .::.: : ::..: :... : ..:
CCDS53 YWYDERG--KKVKCTAPQYVDFVMSSVQKLVTDEDVFPTKYGREFPSSFESLVRKICRHL
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB9 FRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKD
:.: :::: :: .. :. ..:::: . :::.:..::::.: .: : ...: : : :
CCDS53 FHVLAHIYWAHFKETLALELHGHLNTLYVHFILFAREFNLLDPKETAIMDDLTEVLCSGA
190 200 210 220 230 240
pF1KB9 R
CCDS53 GGVHSGGSGDGAGSGGPGAQNHVKER
250 260
216 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:14:32 2016 done: Sat Nov 5 02:14:33 2016
Total Scan time: 1.940 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]