Result of FASTA (ccds) for
pF1KB9423
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9423, 217 aa
1>>>pF1KB9423 217 - 217 aa - 217 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2318+/-0.000743; mu= 13.6567+/- 0.044
mean_var=57.6396+/-11.655, 0's: 0 Z-trim(107.5): 13 B-trim: 0 in 0/50
Lambda= 0.168933
statistics sampled from 9585 (9594) to 9585 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.686), E-opt: 0.2 (0.295), width: 16
Scan time: 1.780
The best scores are: opt bits E(32554)
CCDS12081.1 MOB3A gene_id:126308|Hs108|chr19 ( 217) 1507 375.2 1.7e-104
CCDS6520.1 MOB3B gene_id:79817|Hs108|chr9 ( 216) 1249 312.3 1.5e-85
CCDS540.1 MOB3C gene_id:148932|Hs108|chr1 ( 216) 1181 295.8 1.4e-80
CCDS539.1 MOB3C gene_id:148932|Hs108|chr1 ( 268) 1181 295.8 1.7e-80
CCDS34002.1 MOB1B gene_id:92597|Hs108|chr4 ( 216) 857 216.8 8.3e-57
CCDS58903.1 MOB1B gene_id:92597|Hs108|chr4 ( 221) 857 216.8 8.5e-57
CCDS46340.1 MOB1A gene_id:55233|Hs108|chr2 ( 216) 841 212.9 1.2e-55
CCDS53591.1 MOB2 gene_id:81532|Hs108|chr11 ( 268) 440 115.2 4e-26
>>CCDS12081.1 MOB3A gene_id:126308|Hs108|chr19 (217 aa)
initn: 1507 init1: 1507 opt: 1507 Z-score: 1989.4 bits: 375.2 E(32554): 1.7e-104
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 217 aa overlap (1-217:1-217)
10 20 30 40 50 60
pF1KB9 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSE
130 140 150 160 170 180
190 200 210
pF1KB9 AHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH
:::::::::::::::::::::::::::::::::::::
CCDS12 AHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH
190 200 210
>>CCDS6520.1 MOB3B gene_id:79817|Hs108|chr9 (216 aa)
initn: 1249 init1: 1249 opt: 1249 Z-score: 1649.6 bits: 312.3 E(32554): 1.5e-85
Smith-Waterman score: 1249; 82.1% identity (92.9% similar) in 212 aa overlap (6-217:5-216)
10 20 30 40 50 60
pF1KB9 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDW
::::::::::::::::::::::::::::.::::::.:.::. ::::: ::: :::
CCDS65 MSIALKQVFNKDKTFRPKRKFEPGTQRFELHKRAQASLNSGVDLKAAVQLPSGEDQNDW
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 VAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMD
:::::::::::.::::::: . :::..::::::::::::::::. :..::::: ::.::.
CCDS65 VAVHVVDFFNRINLIYGTICEFCTERTCPVMSGGPKYEYRWQDDLKYKKPTALPAPQYMN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 LLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSE
:::::::.:::::..::: ::.:::::::: .::: ::::::::::::::::. ::.:
CCDS65 LLMDWIEVQINNEEIFPTCVGVPFPKNFLQICKKILCRLFRVFVHVYIHHFDRVIVMGAE
120 130 140 150 160 170
190 200 210
pF1KB9 AHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH
:::::::::::::: :..::: ::::::::::.::::
CCDS65 AHVNTCYKHFYYFVTEMNLIDRKELEPLKEMTSRMCH
180 190 200 210
>>CCDS540.1 MOB3C gene_id:148932|Hs108|chr1 (216 aa)
initn: 1181 init1: 1181 opt: 1181 Z-score: 1560.1 bits: 295.8 E(32554): 1.4e-80
Smith-Waterman score: 1181; 74.1% identity (92.9% similar) in 212 aa overlap (6-217:5-216)
10 20 30 40 50 60
pF1KB9 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDW
::::: :::::::...::::::::::.:::::::..::::: .:.:::::...::
CCDS54 MALCLKQVFAKDKTFRPRKRFEPGTQRFELYKKAQASLKSGLDLRSVVRLPPGENIDDW
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 VAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMD
.::::::::::.::::::... :.: :::::.:::.::::::::...:.:. :::::::
CCDS54 IAVHVVDFFNRINLIYGTMAERCSETSCPVMAGGPRYEYRWQDERQYRRPAKLSAPRYMA
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 LLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSE
:::::::. ::.:..::: ::.:::::: :. :::.::::::::::::::: : .::.:
CCDS54 LLMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKILTRLFRVFVHVYIHHFDSILSMGAE
120 130 140 150 160 170
190 200 210
pF1KB9 AHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH
:::::::::::::..::.:.: .:::::.::: :.::
CCDS54 AHVNTCYKHFYYFIREFSLVDQRELEPLREMTERICH
180 190 200 210
>>CCDS539.1 MOB3C gene_id:148932|Hs108|chr1 (268 aa)
initn: 1181 init1: 1181 opt: 1181 Z-score: 1558.6 bits: 295.8 E(32554): 1.7e-80
Smith-Waterman score: 1181; 74.1% identity (92.9% similar) in 212 aa overlap (6-217:57-268)
10 20 30
pF1KB9 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKA
::::: :::::::...::::::::::.:::
CCDS53 GMDEMTFHIWYPQVRAPGQQPQAQLAMALCLKQVFAKDKTFRPRKRFEPGTQRFELYKKA
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB9 QASLNAGLDLRLAVQLPPGEDLNDWVAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGP
::::..::::: .:.:::::...::.::::::::::.::::::... :.: :::::.:::
CCDS53 QASLKSGLDLRSVVRLPPGENIDDWIAVHVVDFFNRINLIYGTMAERCSETSCPVMAGGP
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB9 KYEYRWQDEHKFRKPTALSAPRYMDLLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKI
.::::::::...:.:. ::::::: :::::::. ::.:..::: ::.:::::: :. ::
CCDS53 RYEYRWQDERQYRRPAKLSAPRYMALLMDWIEGLINDEEVFPTRVGVPFPKNFQQVCTKI
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB9 LSRLFRVFVHVYIHHFDRIAQMGSEAHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARM
:.::::::::::::::: : .::.::::::::::::::..::.:.: .:::::.::: :.
CCDS53 LTRLFRVFVHVYIHHFDSILSMGAEAHVNTCYKHFYYFIREFSLVDQRELEPLREMTERI
210 220 230 240 250 260
pF1KB9 CH
::
CCDS53 CH
>>CCDS34002.1 MOB1B gene_id:92597|Hs108|chr4 (216 aa)
initn: 874 init1: 770 opt: 857 Z-score: 1133.3 bits: 216.8 E(32554): 8.3e-57
Smith-Waterman score: 857; 55.0% identity (86.1% similar) in 202 aa overlap (14-215:11-211)
10 20 30 40 50 60
pF1KB9 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDW
:::.::... :....:: :.:.:.:..: .::.::.:: :::::.:
CCDS34 MSFLFGSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSG-NLRMAVMLPEGEDLNEW
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 VAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMD
:::..:::::..:..::::.: :::.::::::.::::::.: : ...:: :::.:.:
CCDS34 VAVNTVDFFNQINMLYGTITDFCTEESCPVMSAGPKYEYHWADGTNIKKPIKCSAPKYID
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 LLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSE
:: :.. :...: :::...:.::::::..... ::.:::::..:.: .::: . :. :
CCDS34 YLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDPVIQLQEE
120 130 140 150 160 170
190 200 210
pF1KB9 AHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH
::.:: .::: .::.::.::: .:: ::.:. ..
CCDS34 AHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLTSKDR
180 190 200 210
>>CCDS58903.1 MOB1B gene_id:92597|Hs108|chr4 (221 aa)
initn: 874 init1: 770 opt: 857 Z-score: 1133.1 bits: 216.8 E(32554): 8.5e-57
Smith-Waterman score: 857; 55.0% identity (86.1% similar) in 202 aa overlap (14-215:16-216)
10 20 30 40 50
pF1KB9 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLN
:::.::... :....:: :.:.:.:..: .::.::.:: :::::
CCDS58 MEGATDVNESGSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSG-NLRMAVMLPEGEDLN
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 DWVAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRY
.::::..:::::..:..::::.: :::.::::::.::::::.: : ...:: :::.:
CCDS58 EWVAVNTVDFFNQINMLYGTITDFCTEESCPVMSAGPKYEYHWADGTNIKKPIKCSAPKY
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 MDLLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMG
.: :: :.. :...: :::...:.::::::..... ::.:::::..:.: .::: . :.
CCDS58 IDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDPVIQLQ
120 130 140 150 160 170
180 190 200 210
pF1KB9 SEAHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH
:::.:: .::: .::.::.::: .:: ::.:. ..
CCDS58 EEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLTSKDR
180 190 200 210 220
>>CCDS46340.1 MOB1A gene_id:55233|Hs108|chr2 (216 aa)
initn: 858 init1: 754 opt: 841 Z-score: 1112.2 bits: 212.9 E(32554): 1.2e-55
Smith-Waterman score: 841; 53.5% identity (85.1% similar) in 202 aa overlap (14-215:11-211)
10 20 30 40 50 60
pF1KB9 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLRLAVQLPPGEDLNDW
:::.::... :....:: :.:.:.:..: .:: ::.:: :::::.:
CCDS46 MSFLFSSRSSKTFKPKKNIPEGSHQYELLKHAEATLGSG-NLRQAVMLPEGEDLNEW
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 VAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGPKYEYRWQDEHKFRKPTALSAPRYMD
.::..:::::..:..::::.. ::: ::::::.::.:::.: : ...:: :::.:.:
CCDS46 IAVNTVDFFNQINMLYGTITEFCTEASCPVMSAGPRYEYHWADGTNIKKPIKCSAPKYID
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 LLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRKILSRLFRVFVHVYIHHFDRIAQMGSE
:: :.. :...: :::...:.::::::..... ::.:::::..:.: .::: . :. :
CCDS46 YLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEE
120 130 140 150 160 170
190 200 210
pF1KB9 AHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTARMCH
::.:: .::: .::.::.::: .:: ::.:. ..
CCDS46 AHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR
180 190 200 210
>>CCDS53591.1 MOB2 gene_id:81532|Hs108|chr11 (268 aa)
initn: 276 init1: 276 opt: 440 Z-score: 582.6 bits: 115.2 E(32554): 4e-26
Smith-Waterman score: 440; 33.8% identity (68.1% similar) in 213 aa overlap (6-216:32-239)
10 20 30
pF1KB9 MSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKA
...:. :.:. .:. : .:.... . . .
CCDS53 LGDHCSLPEDQARPGQSLQSGLCCKMVLQAVSKVLRKSKA-KPNGK-KPAAEERKAYLEP
10 20 30 40 50
40 50 60 70 80 90
pF1KB9 QASLNAGLDLRLA--VQLPPGEDLNDWVAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSG
. . :... : :: :::.:.: ... ::...:: :.:::. :: ..: .:.
CCDS53 EHTKARITDFQFKELVVLPREIDLNEWLASNTTTFFHHINLQYSTISEFCTGETCQTMAV
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB9 GPKYEYRWQDEHKFRKPTALSAPRYMDLLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVR
. .: : ::. : . .::.:.:..:. .. ...::.:::. : ::..: . ::
CCDS53 C-NTQYYWYDERG--KKVKCTAPQYVDFVMSSVQKLVTDEDVFPTKYGREFPSSFESLVR
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB9 KILSRLFRVFVHVYIHHFDRIAQMGSEAHVNTCYKHFYYFVKEFGLIDTKELEPLKEMTA
:: .::.:..:.: :: . . ..:.:: : :: :..::.:.: :: . ..:
CCDS53 KICRHLFHVLAHIYWAHFKETLALELHGHLNTLYVHFILFAREFNLLDPKETAIMDDLTE
180 190 200 210 220 230
pF1KB9 RMCH
.:
CCDS53 VLCSGAGGVHSGGSGDGAGSGGPGAQNHVKER
240 250 260
217 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 23:18:06 2016 done: Thu Nov 3 23:18:06 2016
Total Scan time: 1.780 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]