Result of FASTA (ccds) for
pF1KB9351
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9351, 1944 aa
1>>>pF1KB9351 1944 - 1944 aa - 1944 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7530+/-0.00108; mu= 16.8433+/- 0.065
mean_var=84.6964+/-16.696, 0's: 0 Z-trim(104.0): 25 B-trim: 0 in 0/52
Lambda= 0.139361
statistics sampled from 7658 (7666) to 7658 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.591), E-opt: 0.2 (0.235), width: 16
Scan time: 6.750
The best scores are: opt bits E(32554)
CCDS2093.1 ANAPC1 gene_id:64682|Hs108|chr2 (1944) 12962 2617.2 0
>>CCDS2093.1 ANAPC1 gene_id:64682|Hs108|chr2 (1944 aa)
initn: 12962 init1: 12962 opt: 12962 Z-score: 14071.8 bits: 2617.2 E(32554): 0
Smith-Waterman score: 12962; 100.0% identity (100.0% similar) in 1944 aa overlap (1-1944:1-1944)
10 20 30 40 50 60
pF1KB9 MSNFYEERTTMIAARDLQEFVPFGRDHCKHHPNALNLQLRQLQPASELWSSDGAAGLVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 MSNFYEERTTMIAARDLQEFVPFGRDHCKHHPNALNLQLRQLQPASELWSSDGAAGLVGS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LQEVTIHEKQKESWQLRKGVSEIGEDVDYDEELYVAGNMVIWSKGSKSQALAVYKAFTVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 LQEVTIHEKQKESWQLRKGVSEIGEDVDYDEELYVAGNMVIWSKGSKSQALAVYKAFTVD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SPVQQALWCDFIISQDKSEKAYSSNEVEKCICILQSSCINMHSIEGKDYIASLPFQVANV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 SPVQQALWCDFIISQDKSEKAYSSNEVEKCICILQSSCINMHSIEGKDYIASLPFQVANV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 WPTKYGLLFERSASSHEVPPGSPREPLPTMFSMLHPLDEITPLVCKSGSLFGSSRVQYVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 WPTKYGLLFERSASSHEVPPGSPREPLPTMFSMLHPLDEITPLVCKSGSLFGSSRVQYVV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DHAMKIVFLNTDPSIVMTYDAVQNVHSVWTLRRVKSEEENVVLKFSEQGGTPQNVATSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 DHAMKIVFLNTDPSIVMTYDAVQNVHSVWTLRRVKSEEENVVLKFSEQGGTPQNVATSSS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 LTAHLRSLSKGDSPVTSPFQNYSSIHSQSRSTSSPSLHSRSPSISNMAALSRAHSPALGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 LTAHLRSLSKGDSPVTSPFQNYSSIHSQSRSTSSPSLHSRSPSISNMAALSRAHSPALGV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 HSFSGVQRFNISSHNQSPKRHSISHSPNSNSNGSFLAPETEPIVPELCIDHLWTETITNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 HSFSGVQRFNISSHNQSPKRHSISHSPNSNSNGSFLAPETEPIVPELCIDHLWTETITNI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 REKNSQASKVFITSDLCGQKFLCFLVESQLQLRCVKFQESNDKTQLIFGSVTNIPAKDAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 REKNSQASKVFITSDLCGQKFLCFLVESQLQLRCVKFQESNDKTQLIFGSVTNIPAKDAA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 PVEKIDTMLVLEGSGNLVLYTGVVRVGKVFIPGLPAPSLTMSNTMPRPSTPLDGVSTPKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 PVEKIDTMLVLEGSGNLVLYTGVVRVGKVFIPGLPAPSLTMSNTMPRPSTPLDGVSTPKP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 LSKLLGSLDEVVLLSPVPELRDSSKLHDSLYNEDCTFQQLGTYIHSIRDPVHNRVTLELS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 LSKLLGSLDEVVLLSPVPELRDSSKLHDSLYNEDCTFQQLGTYIHSIRDPVHNRVTLELS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 NGSMVRITIPEIATSELVQTCLQAIKFILPKEIAVQMLVKWYNVHSAPGGPSYHSEWNLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 NGSMVRITIPEIATSELVQTCLQAIKFILPKEIAVQMLVKWYNVHSAPGGPSYHSEWNLF
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB9 VTCLMNMMGYNTDRLAWTRNFDFEGSLSPVIAPKKARPSETGSDDDWEYLLNSDYHQNVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 VTCLMNMMGYNTDRLAWTRNFDFEGSLSPVIAPKKARPSETGSDDDWEYLLNSDYHQNVE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB9 SHLLNRSLCLSPSEASQMKDEDFSQNLSLDSSTLLFTHIPAIFFVLHLVYEELKLNTLMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 SHLLNRSLCLSPSEASQMKDEDFSQNLSLDSSTLLFTHIPAIFFVLHLVYEELKLNTLMG
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB9 EGICSLVELLVQLARDLKLGPYVDHYYRDYPTLVRTTGQVCTIDPGQTGFMHHPSFFTSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 EGICSLVELLVQLARDLKLGPYVDHYYRDYPTLVRTTGQVCTIDPGQTGFMHHPSFFTSE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB9 PPSIYQWVSSCLKGEGMPPYPYLPGICERSRLVVLSIALYILGDESLVSDESSQYLTRIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 PPSIYQWVSSCLKGEGMPPYPYLPGICERSRLVVLSIALYILGDESLVSDESSQYLTRIT
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB9 IAPQKLQVEQEENRFSFRHSTSVSSLAERLVVWMTNVGFTLRDLETLPFGIALPIRDAIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 IAPQKLQVEQEENRFSFRHSTSVSSLAERLVVWMTNVGFTLRDLETLPFGIALPIRDAIY
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB9 HCREQPASDWPEAVCLLIGRQDLSKQACEGNLPKGKSVLSSDVPSGTETEEEDDGMNDMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 HCREQPASDWPEAVCLLIGRQDLSKQACEGNLPKGKSVLSSDVPSGTETEEEDDGMNDMN
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB9 HEVMSLIWSEDLRVQDVRRLLQSAHPVRVNVVQYPELSDHEFIEEKENRLLQLCQRTMAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 HEVMSLIWSEDLRVQDVRRLLQSAHPVRVNVVQYPELSDHEFIEEKENRLLQLCQRTMAL
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB9 PVGRGMFTLFSYHPVPTEPLPIPKLNLTGRAPPRNTTVDLNSGNIDVPPNMTSWASFHNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 PVGRGMFTLFSYHPVPTEPLPIPKLNLTGRAPPRNTTVDLNSGNIDVPPNMTSWASFHNG
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB9 VAAGLKIAPASQIDSAWIVYNKPKHAELANEYAGFLMALGLNGHLTKLATLNIHDYLTKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 VAAGLKIAPASQIDSAWIVYNKPKHAELANEYAGFLMALGLNGHLTKLATLNIHDYLTKG
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB9 HEMTSIGLLLGVSAAKLGTMDMSITRLLSIHIPALLPPTSTELDVPHNVQVAAVVGIGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 HEMTSIGLLLGVSAAKLGTMDMSITRLLSIHIPALLPPTSTELDVPHNVQVAAVVGIGLV
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB9 YQGTAHRHTAEVLLAEIGRPPGPEMEYCTDRESYSLAAGLALGMVCLGHGSNLIGMSDLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 YQGTAHRHTAEVLLAEIGRPPGPEMEYCTDRESYSLAAGLALGMVCLGHGSNLIGMSDLN
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KB9 VPEQLYQYMVGGHRRFQTGMHREKHKSPSYQIKEGDTINVDVTCPGATLALAMIYLKTNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 VPEQLYQYMVGGHRRFQTGMHREKHKSPSYQIKEGDTINVDVTCPGATLALAMIYLKTNN
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KB9 RSIADWLRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 RSIADWLRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSIS
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KB9 LSEIELPCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFNCLHKFAKDFMTYLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 LSEIELPCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFNCLHKFAKDFMTYLS
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KB9 APNASVTGPHNLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGEMNYGFHLAHHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 APNASVTGPHNLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGEMNYGFHLAHHM
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KB9 ALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 ALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLLV
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KB9 PVDVDTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLIDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 PVDVDTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLIDL
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KB9 SKGTQHLKSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETISA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 SKGTQHLKSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETISA
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KB9 FTSDPALLSFAEYFCKPTVNMGQKQEILDLFSSVLYECVTQETPEMLPAYIAMDQAIRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 FTSDPALLSFAEYFCKPTVNMGQKQEILDLFSSVLYECVTQETPEMLPAYIAMDQAIRRL
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KB9 GRREMSETSELWQIKLVLEFFSSRSHQERLQNHPKRGLFMNSEFLPVVKCTIDNTLDQWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 GRREMSETSELWQIKLVLEFFSSRSHQERLQNHPKRGLFMNSEFLPVVKCTIDNTLDQWL
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KB9 QVGGDMCVHAYLSGQPLEESQLSMLACFLVYHSVPAPQHLPPIGLEGSTSFAELLFKFKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 QVGGDMCVHAYLSGQPLEESQLSMLACFLVYHSVPAPQHLPPIGLEGSTSFAELLFKFKQ
1870 1880 1890 1900 1910 1920
1930 1940
pF1KB9 LKMPVRALLRLAPLLLGNPQPMVM
::::::::::::::::::::::::
CCDS20 LKMPVRALLRLAPLLLGNPQPMVM
1930 1940
1944 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 23:11:16 2016 done: Thu Nov 3 23:11:17 2016
Total Scan time: 6.750 Total Display time: 0.160
Function used was FASTA [36.3.4 Apr, 2011]