Result of FASTA (ccds) for
pF1KB9027
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9027, 239 aa
1>>>pF1KB9027 239 - 239 aa - 239 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9740+/-0.000823; mu= 16.5893+/- 0.049
mean_var=70.0867+/-14.741, 0's: 0 Z-trim(107.8): 16 B-trim: 527 in 1/48
Lambda= 0.153199
statistics sampled from 9792 (9807) to 9792 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.674), E-opt: 0.2 (0.301), width: 16
Scan time: 2.200
The best scores are: opt bits E(32554)
CCDS11073.1 DERL2 gene_id:51009|Hs108|chr17 ( 239) 1640 371.2 3.5e-103
CCDS33615.1 DERL3 gene_id:91319|Hs108|chr22 ( 235) 1272 289.8 1e-78
CCDS42986.1 DERL3 gene_id:91319|Hs108|chr22 ( 205) 1158 264.6 3.6e-71
CCDS46672.1 DERL3 gene_id:91319|Hs108|chr22 ( 239) 1158 264.6 4.1e-71
CCDS6337.1 DERL1 gene_id:79139|Hs108|chr8 ( 251) 487 116.3 1.9e-26
CCDS47915.1 DERL1 gene_id:79139|Hs108|chr8 ( 231) 416 100.6 9.3e-22
CCDS76927.1 DERL2 gene_id:51009|Hs108|chr17 ( 74) 355 86.7 4.5e-18
CCDS83319.1 DERL1 gene_id:79139|Hs108|chr8 ( 151) 250 63.8 7.4e-11
>>CCDS11073.1 DERL2 gene_id:51009|Hs108|chr17 (239 aa)
initn: 1640 init1: 1640 opt: 1640 Z-score: 1966.0 bits: 371.2 E(32554): 3.5e-103
Smith-Waterman score: 1640; 100.0% identity (100.0% similar) in 239 aa overlap (1-239:1-239)
10 20 30 40 50 60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGH
130 140 150 160 170 180
190 200 210 220 230
pF1KB9 IYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
190 200 210 220 230
>>CCDS33615.1 DERL3 gene_id:91319|Hs108|chr22 (235 aa)
initn: 1272 init1: 1272 opt: 1272 Z-score: 1526.5 bits: 289.8 E(32554): 1e-78
Smith-Waterman score: 1272; 78.0% identity (94.3% similar) in 227 aa overlap (1-227:1-227)
10 20 30 40 50 60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
::.:.: :.::.: :.::::.:::::::::::::..::::::::.:.:..::.:::.::
CCDS33 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
::::::.::.:.:::.:..:::::::::::::::::::::::::: ::::.::. :: ::
CCDS33 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGH
:::. :::::::::.: ::.::::::.::::::::.::::::::::::.::::::::::
CCDS33 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
130 140 150 160 170 180
190 200 210 220 230
pF1KB9 IYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
::.:::::::::::: :.:.::..:: ..:.: ::::: :::::.::
CCDS33 IYYFLEDVFPNQPGGKRLLQTPGFLKLLLDAPAEDPNYLPLPEEQPGPHLPPPQQ
190 200 210 220 230
>>CCDS42986.1 DERL3 gene_id:91319|Hs108|chr22 (205 aa)
initn: 1185 init1: 1158 opt: 1158 Z-score: 1391.1 bits: 264.6 E(32554): 3.6e-71
Smith-Waterman score: 1158; 79.0% identity (95.1% similar) in 205 aa overlap (1-205:1-205)
10 20 30 40 50 60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
::.:.: :.::.: :.::::.:::::::::::::..::::::::.:.:..::.:::.::
CCDS42 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
::::::.::.:.:::.:..:::::::::::::::::::::::::: ::::.::. :: ::
CCDS42 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGH
:::. :::::::::.: ::.::::::.::::::::.::::::::::::.::::::::::
CCDS42 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
130 140 150 160 170 180
190 200 210 220 230
pF1KB9 IYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
::.:::::::::::: :.:.::..:
CCDS42 IYYFLEDVFPNQPGGKRLLQTPGFL
190 200
>>CCDS46672.1 DERL3 gene_id:91319|Hs108|chr22 (239 aa)
initn: 1158 init1: 1158 opt: 1158 Z-score: 1390.2 bits: 264.6 E(32554): 4.1e-71
Smith-Waterman score: 1158; 79.0% identity (95.1% similar) in 205 aa overlap (1-205:1-205)
10 20 30 40 50 60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
::.:.: :.::.: :.::::.:::::::::::::..::::::::.:.:..::.:::.::
CCDS46 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
::::::.::.:.:::.:..:::::::::::::::::::::::::: ::::.::. :: ::
CCDS46 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGH
:::. :::::::::.: ::.::::::.::::::::.::::::::::::.::::::::::
CCDS46 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
130 140 150 160 170 180
190 200 210 220 230
pF1KB9 IYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
::.:::::::::::: :.:.::..:
CCDS46 IYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAAPS
190 200 210 220 230
>>CCDS6337.1 DERL1 gene_id:79139|Hs108|chr8 (251 aa)
initn: 516 init1: 370 opt: 487 Z-score: 588.4 bits: 116.3 E(32554): 1.9e-26
Smith-Waterman score: 499; 35.5% identity (63.2% similar) in 242 aa overlap (10-238:8-249)
10 20 30 40 50 60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
. .:: ..: . .: : . . .: ::.: :.. :: .. .::::: ::
CCDS63 MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITA
10 20 30 40 50
70 80 90 100 110
pF1KB9 FLFF--GP-VGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSL
..: :: .:: .: :. :::.: :: :.: :: ::..::.::. . ... :: ...
CCDS63 TFYFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 VFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIA
.: . . ..:::.. : . ..:. :.: .::::..::. ..:.:.: .:.:
CCDS63 QLLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNL
120 130 140 150 160 170
180 190 200 210 220
pF1KB9 VGHIYFFLEDVFPNQPGGIRILKTPSILK----------AIFDTPDEDPNYNPLPEERPG
:::.:::: .: . :: .:.::..: . : .: . . :
CCDS63 VGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGG
180 190 200 210 220 230
230
pF1KB9 GFAWGEGQRLGG
::.: :::
CCDS63 RHNWGQGFRLGDQ
240 250
>>CCDS47915.1 DERL1 gene_id:79139|Hs108|chr8 (231 aa)
initn: 473 init1: 295 opt: 416 Z-score: 504.1 bits: 100.6 E(32554): 9.3e-22
Smith-Waterman score: 431; 33.2% identity (61.6% similar) in 232 aa overlap (10-238:8-229)
10 20 30 40 50 60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
. .:: ..: . .: : . . .: ::.: :.. :: .. .::::: ::
CCDS47 MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITA
10 20 30 40 50
70 80 90 100 110
pF1KB9 FLFF--GP-VGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSL
..: :: .:: .: :. :::.: :: :.: :: ::..::.::. . ... :: ...
CCDS47 TFYFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 VFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIA
.: . . ..:::.. : . ..:. :.: .::::..::. ..:.: .:: :
CCDS47 QLLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSYPMDLGGRN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 VGHIYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRL
:: .:.. ::. . .: .. . :.. . : ::.: ::
CCDS47 FLSTPQFLYRWLPSRRGGVSGFGVPP--ASMRRAADQNGG--------GGRHNWGQGFRL
180 190 200 210 220
pF1KB9 GG
:
CCDS47 GDQ
230
>>CCDS76927.1 DERL2 gene_id:51009|Hs108|chr17 (74 aa)
initn: 353 init1: 353 opt: 355 Z-score: 438.0 bits: 86.7 E(32554): 4.5e-18
Smith-Waterman score: 355; 88.9% identity (95.2% similar) in 63 aa overlap (1-63:1-62)
10 20 30 40 50 60
pF1KB9 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
:::::::::::::::::::::::::::::::::::::::::::::::::::::. .: :
CCDS76 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQVLQLDT-
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
..:
CCDS76 YIFSWKMYFPINLVE
60 70
>>CCDS83319.1 DERL1 gene_id:79139|Hs108|chr8 (151 aa)
initn: 277 init1: 242 opt: 250 Z-score: 308.4 bits: 63.8 E(32554): 7.4e-11
Smith-Waterman score: 262; 31.5% identity (60.4% similar) in 149 aa overlap (100-238:1-149)
70 80 90 100 110 120
pF1KB9 NFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFTIMLV
:.::. . ... :: ... .: . . ..
CCDS83 MLLFNWICIVITGLAMDMQLLMIPLIMSVL
10 20 30
130 140 150 160 170 180
pF1KB9 YVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVF
:::.. : . ..:. :.: .::::..::. ..:.:.: .:.: :::.:::: .
CCDS83 YVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNLVGHLYFFLMFRY
40 50 60 70 80 90
190 200 210 220 230
pF1KB9 PNQPGGIRILKTPSILK----------AIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
: . :: .:.::..: . : .: . . : ::.: :::
CCDS83 PMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGGRHNWGQGFRLGD
100 110 120 130 140 150
CCDS83 Q
239 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:58:05 2016 done: Thu Nov 3 22:58:05 2016
Total Scan time: 2.200 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]