Result of FASTA (omim) for
pF1KB9017
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9017, 443 aa
1>>>pF1KB9017 443 - 443 aa - 443 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3503+/-0.000338; mu= 19.0500+/- 0.021
mean_var=94.8521+/-19.998, 0's: 0 Z-trim(116.4): 30 B-trim: 176 in 1/56
Lambda= 0.131689
statistics sampled from 27519 (27549) to 27519 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.695), E-opt: 0.2 (0.323), width: 16
Scan time: 8.000
The best scores are: opt bits E(85289)
NP_001479 (OMIM: 602276) transcriptional adapter 2 ( 443) 3023 584.6 1.8e-166
NP_001159577 (OMIM: 602276) transcriptional adapte ( 443) 3023 584.6 1.8e-166
XP_011523455 (OMIM: 602276) PREDICTED: transcripti ( 380) 2540 492.7 6.7e-139
XP_011523456 (OMIM: 602276) PREDICTED: transcripti ( 380) 2540 492.7 6.7e-139
XP_016880470 (OMIM: 602276) PREDICTED: transcripti ( 423) 2535 491.8 1.4e-138
XP_016880473 (OMIM: 602276) PREDICTED: transcripti ( 342) 2269 441.2 2e-123
XP_011523457 (OMIM: 602276) PREDICTED: transcripti ( 342) 2269 441.2 2e-123
XP_006722107 (OMIM: 602276) PREDICTED: transcripti ( 342) 2269 441.2 2e-123
XP_016880474 (OMIM: 602276) PREDICTED: transcripti ( 342) 2269 441.2 2e-123
XP_016880472 (OMIM: 602276) PREDICTED: transcripti ( 342) 2269 441.2 2e-123
NP_001278847 (OMIM: 602276) transcriptional adapte ( 305) 1926 376.0 7.5e-104
NP_597683 (OMIM: 602276) transcriptional adapter 2 ( 305) 1926 376.0 7.5e-104
XP_016880471 (OMIM: 602276) PREDICTED: transcripti ( 389) 1588 311.9 1.9e-84
XP_016880475 (OMIM: 602276) PREDICTED: transcripti ( 239) 1564 307.1 3.2e-83
NP_689506 (OMIM: 608790) transcriptional adapter 2 ( 420) 512 107.5 7e-23
XP_011511897 (OMIM: 608790) PREDICTED: transcripti ( 328) 330 72.8 1.5e-12
>>NP_001479 (OMIM: 602276) transcriptional adapter 2-alp (443 aa)
initn: 3023 init1: 3023 opt: 3023 Z-score: 3109.7 bits: 584.6 E(85289): 1.8e-166
Smith-Waterman score: 3023; 100.0% identity (100.0% similar) in 443 aa overlap (1-443:1-443)
10 20 30 40 50 60
pF1KB9 MDRLGSFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDRLGSFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 YEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFIN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 NPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 NYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLME
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 RRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 RTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 SAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALI
370 380 390 400 410 420
430 440
pF1KB9 KIDVNKTRKIYDFLIREGYITKG
:::::::::::::::::::::::
NP_001 KIDVNKTRKIYDFLIREGYITKG
430 440
>>NP_001159577 (OMIM: 602276) transcriptional adapter 2- (443 aa)
initn: 3023 init1: 3023 opt: 3023 Z-score: 3109.7 bits: 584.6 E(85289): 1.8e-166
Smith-Waterman score: 3023; 100.0% identity (100.0% similar) in 443 aa overlap (1-443:1-443)
10 20 30 40 50 60
pF1KB9 MDRLGSFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDRLGSFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 YEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFIN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 NPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 NYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLME
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 RRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 RTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 SAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALI
370 380 390 400 410 420
430 440
pF1KB9 KIDVNKTRKIYDFLIREGYITKG
:::::::::::::::::::::::
NP_001 KIDVNKTRKIYDFLIREGYITKG
430 440
>>XP_011523455 (OMIM: 602276) PREDICTED: transcriptional (380 aa)
initn: 2540 init1: 2540 opt: 2540 Z-score: 2614.6 bits: 492.7 E(85289): 6.7e-139
Smith-Waterman score: 2540; 100.0% identity (100.0% similar) in 380 aa overlap (64-443:1-380)
40 50 60 70 80 90
pF1KB9 CGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFG
::::::::::::::::::::::::::::::
XP_011 MTSDFPVLDPSWTAQEEMALLEAVMDCGFG
10 20 30
100 110 120 130 140 150
pF1KB9 NWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQAEEAKTADTAIPFHSTDDPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQAEEAKTADTAIPFHSTDDPP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB9 RPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHS
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB9 RLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESH
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB9 ALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSAC
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB9 QQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGA
280 290 300 310 320 330
400 410 420 430 440
pF1KB9 YLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYITKG
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYITKG
340 350 360 370 380
>>XP_011523456 (OMIM: 602276) PREDICTED: transcriptional (380 aa)
initn: 2540 init1: 2540 opt: 2540 Z-score: 2614.6 bits: 492.7 E(85289): 6.7e-139
Smith-Waterman score: 2540; 100.0% identity (100.0% similar) in 380 aa overlap (64-443:1-380)
40 50 60 70 80 90
pF1KB9 CGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFG
::::::::::::::::::::::::::::::
XP_011 MTSDFPVLDPSWTAQEEMALLEAVMDCGFG
10 20 30
100 110 120 130 140 150
pF1KB9 NWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQAEEAKTADTAIPFHSTDDPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQAEEAKTADTAIPFHSTDDPP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB9 RPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHS
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB9 RLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESH
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB9 ALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSAC
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB9 QQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGA
280 290 300 310 320 330
400 410 420 430 440
pF1KB9 YLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYITKG
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYITKG
340 350 360 370 380
>>XP_016880470 (OMIM: 602276) PREDICTED: transcriptional (423 aa)
initn: 2535 init1: 2535 opt: 2535 Z-score: 2608.9 bits: 491.8 E(85289): 1.4e-138
Smith-Waterman score: 2827; 95.5% identity (95.5% similar) in 443 aa overlap (1-443:1-423)
10 20 30 40 50 60
pF1KB9 MDRLGSFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYKKHQSDHT
::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDRLGSFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQ----------------
10 20 30 40
70 80 90 100 110 120
pF1KB9 YEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ----TSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFIN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 NPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFD
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 NYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLME
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 RRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSA
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 RTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRR
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB9 SAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALI
350 360 370 380 390 400
430 440
pF1KB9 KIDVNKTRKIYDFLIREGYITKG
:::::::::::::::::::::::
XP_016 KIDVNKTRKIYDFLIREGYITKG
410 420
>>XP_016880473 (OMIM: 602276) PREDICTED: transcriptional (342 aa)
initn: 2269 init1: 2269 opt: 2269 Z-score: 2337.0 bits: 441.2 E(85289): 2e-123
Smith-Waterman score: 2269; 100.0% identity (100.0% similar) in 342 aa overlap (102-443:1-342)
80 90 100 110 120 130
pF1KB9 DPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNL
::::::::::::::::::::::::::::::
XP_016 MCTKTKEECEKHYMKHFINNPLFASTLLNL
10 20 30
140 150 160 170 180 190
pF1KB9 KQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDID
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB9 FVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLY
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB9 ETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTRE
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB9 EERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLP
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB9 GTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIY
280 290 300 310 320 330
440
pF1KB9 DFLIREGYITKG
::::::::::::
XP_016 DFLIREGYITKG
340
>>XP_011523457 (OMIM: 602276) PREDICTED: transcriptional (342 aa)
initn: 2269 init1: 2269 opt: 2269 Z-score: 2337.0 bits: 441.2 E(85289): 2e-123
Smith-Waterman score: 2269; 100.0% identity (100.0% similar) in 342 aa overlap (102-443:1-342)
80 90 100 110 120 130
pF1KB9 DPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNL
::::::::::::::::::::::::::::::
XP_011 MCTKTKEECEKHYMKHFINNPLFASTLLNL
10 20 30
140 150 160 170 180 190
pF1KB9 KQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDID
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB9 FVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLY
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB9 ETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTRE
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB9 EERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLP
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB9 GTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIY
280 290 300 310 320 330
440
pF1KB9 DFLIREGYITKG
::::::::::::
XP_011 DFLIREGYITKG
340
>>XP_006722107 (OMIM: 602276) PREDICTED: transcriptional (342 aa)
initn: 2269 init1: 2269 opt: 2269 Z-score: 2337.0 bits: 441.2 E(85289): 2e-123
Smith-Waterman score: 2269; 100.0% identity (100.0% similar) in 342 aa overlap (102-443:1-342)
80 90 100 110 120 130
pF1KB9 DPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNL
::::::::::::::::::::::::::::::
XP_006 MCTKTKEECEKHYMKHFINNPLFASTLLNL
10 20 30
140 150 160 170 180 190
pF1KB9 KQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDID
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB9 FVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLY
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB9 ETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTRE
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB9 EERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLP
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB9 GTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIY
280 290 300 310 320 330
440
pF1KB9 DFLIREGYITKG
::::::::::::
XP_006 DFLIREGYITKG
340
>>XP_016880474 (OMIM: 602276) PREDICTED: transcriptional (342 aa)
initn: 2269 init1: 2269 opt: 2269 Z-score: 2337.0 bits: 441.2 E(85289): 2e-123
Smith-Waterman score: 2269; 100.0% identity (100.0% similar) in 342 aa overlap (102-443:1-342)
80 90 100 110 120 130
pF1KB9 DPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNL
::::::::::::::::::::::::::::::
XP_016 MCTKTKEECEKHYMKHFINNPLFASTLLNL
10 20 30
140 150 160 170 180 190
pF1KB9 KQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDID
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB9 FVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLY
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB9 ETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTRE
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB9 EERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLP
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB9 GTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIY
280 290 300 310 320 330
440
pF1KB9 DFLIREGYITKG
::::::::::::
XP_016 DFLIREGYITKG
340
>>XP_016880472 (OMIM: 602276) PREDICTED: transcriptional (342 aa)
initn: 2269 init1: 2269 opt: 2269 Z-score: 2337.0 bits: 441.2 E(85289): 2e-123
Smith-Waterman score: 2269; 100.0% identity (100.0% similar) in 342 aa overlap (102-443:1-342)
80 90 100 110 120 130
pF1KB9 DPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNL
::::::::::::::::::::::::::::::
XP_016 MCTKTKEECEKHYMKHFINNPLFASTLLNL
10 20 30
140 150 160 170 180 190
pF1KB9 KQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDID
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB9 FVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLY
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB9 ETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTRE
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB9 EERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLP
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB9 GTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIY
280 290 300 310 320 330
440
pF1KB9 DFLIREGYITKG
::::::::::::
XP_016 DFLIREGYITKG
340
443 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 18:17:08 2016 done: Thu Nov 3 18:17:09 2016
Total Scan time: 8.000 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]