Result of FASTA (omim) for
pF1KB8970
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8970, 359 aa
1>>>pF1KB8970 359 - 359 aa - 359 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4849+/-0.000367; mu= 21.7584+/- 0.023
mean_var=76.5242+/-16.178, 0's: 0 Z-trim(113.4): 95 B-trim: 0 in 0/51
Lambda= 0.146614
statistics sampled from 22594 (22699) to 22594 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.63), E-opt: 0.2 (0.266), width: 16
Scan time: 7.510
The best scores are: opt bits E(85289)
NP_000944 (OMIM: 604687,607277) prostaglandin D2 r ( 359) 2409 519.1 6e-147
XP_005267948 (OMIM: 604687,607277) PREDICTED: pros ( 359) 2409 519.1 6e-147
NP_001268398 (OMIM: 604687,607277) prostaglandin D ( 296) 1901 411.5 1.2e-114
NP_000947 (OMIM: 176804,208550) prostaglandin E2 r ( 358) 773 173.0 8.9e-43
XP_005259150 (OMIM: 600022) PREDICTED: prostacycli ( 342) 535 122.7 1.2e-27
XP_005259152 (OMIM: 600022) PREDICTED: prostacycli ( 257) 533 122.1 1.4e-27
NP_000951 (OMIM: 600022) prostacyclin receptor [Ho ( 386) 533 122.3 1.8e-27
XP_016865148 (OMIM: 601586) PREDICTED: prostagland ( 313) 405 95.1 2.2e-19
XP_016865147 (OMIM: 601586) PREDICTED: prostagland ( 325) 405 95.2 2.3e-19
XP_016865146 (OMIM: 601586) PREDICTED: prostagland ( 326) 405 95.2 2.3e-19
XP_016865145 (OMIM: 601586) PREDICTED: prostagland ( 350) 405 95.2 2.4e-19
NP_000949 (OMIM: 601586) prostaglandin E2 receptor ( 488) 405 95.4 3e-19
NP_942011 (OMIM: 176806) prostaglandin E2 receptor ( 418) 382 90.4 7.8e-18
NP_942010 (OMIM: 176806) prostaglandin E2 receptor ( 365) 376 89.1 1.7e-17
NP_942009 (OMIM: 176806) prostaglandin E2 receptor ( 374) 373 88.5 2.7e-17
NP_942008 (OMIM: 176806) prostaglandin E2 receptor ( 388) 372 88.3 3.2e-17
NP_942007 (OMIM: 176806) prostaglandin E2 receptor ( 390) 372 88.3 3.2e-17
NP_001119516 (OMIM: 176806) prostaglandin E2 recep ( 390) 372 88.3 3.2e-17
NP_942012 (OMIM: 176806) prostaglandin E2 receptor ( 390) 372 88.3 3.2e-17
XP_011540112 (OMIM: 176806) PREDICTED: prostagland ( 410) 372 88.3 3.3e-17
XP_011526516 (OMIM: 188070,614009) PREDICTED: thro ( 343) 306 74.2 4.7e-13
NP_001051 (OMIM: 188070,614009) thromboxane A2 rec ( 343) 306 74.2 4.7e-13
NP_963998 (OMIM: 188070,614009) thromboxane A2 rec ( 407) 306 74.3 5.3e-13
NP_000946 (OMIM: 176802) prostaglandin E2 receptor ( 402) 250 62.5 1.9e-09
XP_016857362 (OMIM: 600563) PREDICTED: prostagland ( 291) 229 57.9 3.4e-08
NP_001034674 (OMIM: 600563) prostaglandin F2-alpha ( 297) 229 57.9 3.4e-08
NP_000950 (OMIM: 600563) prostaglandin F2-alpha re ( 359) 229 58.0 3.9e-08
NP_001025186 (OMIM: 606665) melanopsin isoform 2 [ ( 489) 190 49.9 1.4e-05
XP_016872444 (OMIM: 606665) PREDICTED: melanopsin ( 539) 190 49.9 1.5e-05
XP_016872446 (OMIM: 606665) PREDICTED: melanopsin ( 405) 177 47.0 8.6e-05
NP_473362 (OMIM: 300393,300943) probable G-protein ( 508) 167 45.0 0.00043
NP_703143 (OMIM: 604847) G-protein coupled recepto ( 337) 164 44.2 0.00051
NP_150598 (OMIM: 606665) melanopsin isoform 1 [Hom ( 478) 161 43.7 0.001
XP_016872445 (OMIM: 606665) PREDICTED: melanopsin ( 528) 161 43.8 0.0011
NP_543009 (OMIM: 606921) G-protein coupled recepto ( 363) 151 41.5 0.0036
NP_000667 (OMIM: 600446) adenosine receptor A2b [H ( 332) 150 41.2 0.004
XP_011527129 (OMIM: 162651) PREDICTED: neurotensin ( 336) 148 40.8 0.0053
>>NP_000944 (OMIM: 604687,607277) prostaglandin D2 recep (359 aa)
initn: 2409 init1: 2409 opt: 2409 Z-score: 2759.1 bits: 519.1 E(85289): 6e-147
Smith-Waterman score: 2409; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:1-359)
10 20 30 40 50 60
pF1KB8 MKSPFYRCQNTTSVEKGNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MKSPFYRCQNTTSVEKGNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 FYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSST
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 TWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 RDCAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEKNRTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RDCAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEKNRTS
250 260 270 280 290 300
310 320 330 340 350
pF1KB8 EEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFFHKIFIRPLRYRSRCSNSTNMESSL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 EEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFFHKIFIRPLRYRSRCSNSTNMESSL
310 320 330 340 350
>>XP_005267948 (OMIM: 604687,607277) PREDICTED: prostagl (359 aa)
initn: 2409 init1: 2409 opt: 2409 Z-score: 2759.1 bits: 519.1 E(85289): 6e-147
Smith-Waterman score: 2409; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:1-359)
10 20 30 40 50 60
pF1KB8 MKSPFYRCQNTTSVEKGNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKSPFYRCQNTTSVEKGNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 FYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSST
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 TWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 RDCAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEKNRTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RDCAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEKNRTS
250 260 270 280 290 300
310 320 330 340 350
pF1KB8 EEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFFHKIFIRPLRYRSRCSNSTNMESSL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFFHKIFIRPLRYRSRCSNSTNMESSL
310 320 330 340 350
>>NP_001268398 (OMIM: 604687,607277) prostaglandin D2 re (296 aa)
initn: 1901 init1: 1901 opt: 1901 Z-score: 2179.4 bits: 411.5 E(85289): 1.2e-114
Smith-Waterman score: 1901; 100.0% identity (100.0% similar) in 282 aa overlap (1-282:1-282)
10 20 30 40 50 60
pF1KB8 MKSPFYRCQNTTSVEKGNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKSPFYRCQNTTSVEKGNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 FYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSST
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 TWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 RDCAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEKNRTS
::::::::::::::::::::::::::::::::::::::::::
NP_001 RDCAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIAFVPGVPAKTPGSR
250 260 270 280 290
310 320 330 340 350
pF1KB8 EEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFFHKIFIRPLRYRSRCSNSTNMESSL
>>NP_000947 (OMIM: 176804,208550) prostaglandin E2 recep (358 aa)
initn: 916 init1: 345 opt: 773 Z-score: 888.9 bits: 173.0 E(85289): 8.9e-43
Smith-Waterman score: 895; 44.1% identity (68.5% similar) in 356 aa overlap (8-357:13-350)
10 20 30 40 50
pF1KB8 MKSPFYRCQNTTSVEKGNSAVMGGVLFSTGLLGNLLALGLLARSGLG--WCSRRP
:.. . :.: ....:.::.:.::::.::.:::: : ::
NP_000 MGNASNDSQSEDCETRQWLPPGESPAISSVMFSAGVLGNLIALALLARRWRGDVGCSA-G
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 LRPLPSVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMS
: :.:..:: :. ::::: ::.::::::.::.:..: .::: .. : ::: :.
NP_000 RRSSLSLFHVLVTELVFTDLLGTCLISPVVLASYARNQTLVALAP--ESRACTYFAFAMT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 FFGLSSTLQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGK
::.:.. :.:.::::: .::.:::.::.:... : : ::. : :: ::.::.. .:.
NP_000 FFSLATMLMLFAMALERYLSIGHPYFYQRRVSRSGGLAVLPVIYAVSLLFCSLPLLDYGQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 FVQYCPGTWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQ
.:::::::::::. .: . : ::..:. ::..... ::.... :: :::: .
NP_000 YVQYCPGTWCFIR----HGRTAYLQ---LYATLLLLLIVSVLACNFSVILNLIRMHRRSR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 RH---PRSCTRDCAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAF
: : : . : : : . :: :::.:::.::. :..:::: ::..
NP_000 RSRCGP-SLGSGRGGPGARRRGERVSMAEETDHLILLAIMTITFAVCSLPFTIFAYMNET
240 250 260 270 280
300 310 320 330 340
pF1KB8 KDVKEKNRTSEEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFFHKIFIR-PLRYRSRC
.. ::: ::.::::::. ::.:::.: :.: ::.:.. . : :: ..
NP_000 SSRKEK-------WDLQALRFLSINSIIDPWVFAILRPPVLRLMRSVLCCRISLRTQDAT
290 300 310 320 330 340
350
pF1KB8 SNSTNMESSL
..: . .:
NP_000 QTSCSTQSDASKQADL
350
>>XP_005259150 (OMIM: 600022) PREDICTED: prostacyclin re (342 aa)
initn: 645 init1: 321 opt: 535 Z-score: 617.1 bits: 122.7 E(85289): 1.2e-27
Smith-Waterman score: 671; 42.7% identity (69.1% similar) in 288 aa overlap (8-295:5-267)
10 20 30 40 50 60
pF1KB8 MKSPFYRCQNTTSVEKGNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSV
:.: : :. . . . . ..: .:..:: ::::.:. .::: :: :.
XP_005 MADSCRNLTYVRGSVGPATSTLMFVAGVVGNGLALGILS-------ARRPARP--SA
10 20 30 40
70 80 90 100 110 120
pF1KB8 FYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSST
: .:: ::..::::: .:::.:..:::.: :: :: . .::.:::: :.::::.:
XP_005 FAVLVTGLAATDLLGTSFLSPAVFVAYARNSSLLGLARG-GPALCDAFAFAMTFFGLASM
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 LQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPG
: :.:::.: :.:.::..: . : . :. :.. :: . :::::..:.:. :::::
XP_005 LILFAMAVERCLALSHPYLYAQLDGPRCARLALPAIYAFCVLFCALPLLGLGQHQQYCPG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB8 TWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCT
.:::..: . . .. .:. :..:.:::: : ::: .. .: :.:. .:: :
XP_005 SWCFLRMRWAQPGGAA--FSLAYAGLVALLVAAIFLCNGSVTLSLCRMYRQQKRHQGSLG
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB8 RDCAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEKNRTS
:: : .:.:::.:::::::....::::. .:. ..:. : .
XP_005 -----PRPRTGE------DEVDHLILLALMTVVMAVCSLPLTMRG--SVFRPVTQSQVLV
230 240 250 260 270
310 320 330 340 350
pF1KB8 EEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFFHKIFIRPLRYRSRCSNSTNMESSL
XP_005 LGPSIVEPDLPPTWLPSASEQAPPLPLHLGFLRGPRPAPPQWEWHRPWYPLSVCDTWSCH
280 290 300 310 320 330
>>XP_005259152 (OMIM: 600022) PREDICTED: prostacyclin re (257 aa)
initn: 639 init1: 321 opt: 533 Z-score: 616.3 bits: 122.1 E(85289): 1.4e-27
Smith-Waterman score: 663; 43.8% identity (69.3% similar) in 274 aa overlap (8-281:5-255)
10 20 30 40 50 60
pF1KB8 MKSPFYRCQNTTSVEKGNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSV
:.: : :. . . . . ..: .:..:: ::::.:. .::: :: :.
XP_005 MADSCRNLTYVRGSVGPATSTLMFVAGVVGNGLALGILS-------ARRPARP--SA
10 20 30 40
70 80 90 100 110 120
pF1KB8 FYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSST
: .:: ::..::::: .:::.:..:::.: :: :: . .::.:::: :.::::.:
XP_005 FAVLVTGLAATDLLGTSFLSPAVFVAYARNSSLLGLARG-GPALCDAFAFAMTFFGLASM
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 LQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPG
: :.:::.: :.:.::..: . : . :. :.. :: . :::::..:.:. :::::
XP_005 LILFAMAVERCLALSHPYLYAQLDGPRCARLALPAIYAFCVLFCALPLLGLGQHQQYCPG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB8 TWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCT
.:::..: . . . ..:. :..:.:::: : ::: .. .: :.:. .:: :
XP_005 SWCFLRMRWAQPGGA--AFSLAYAGLVALLVAAIFLCNGSVTLSLCRMYRQQKRHQGSLG
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB8 RDCAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEKNRTS
:: : .:.:::.:::::::....::::.
XP_005 -----PRPRTGE------DEVDHLILLALMTVVMAVCSLPLTQ
230 240 250
310 320 330 340 350
pF1KB8 EEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFFHKIFIRPLRYRSRCSNSTNMESSL
>>NP_000951 (OMIM: 600022) prostacyclin receptor [Homo s (386 aa)
initn: 746 init1: 321 opt: 533 Z-score: 614.2 bits: 122.3 E(85289): 1.8e-27
Smith-Waterman score: 767; 42.8% identity (67.1% similar) in 325 aa overlap (8-332:5-301)
10 20 30 40 50 60
pF1KB8 MKSPFYRCQNTTSVEKGNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSV
:.: : :. . . . . ..: .:..:: ::::.:. .::: :: :.
NP_000 MADSCRNLTYVRGSVGPATSTLMFVAGVVGNGLALGILS-------ARRPARP--SA
10 20 30 40
70 80 90 100 110 120
pF1KB8 FYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSST
: .:: ::..::::: .:::.:..:::.: :: :: . .::.:::: :.::::.:
NP_000 FAVLVTGLAATDLLGTSFLSPAVFVAYARNSSLLGLARG-GPALCDAFAFAMTFFGLASM
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 LQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPG
: :.:::.: :.:.::..: . : . :. :.. :: . :::::..:.:. :::::
NP_000 LILFAMAVERCLALSHPYLYAQLDGPRCARLALPAIYAFCVLFCALPLLGLGQHQQYCPG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB8 TWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCT
.:::..: . . .. .:. :..:.:::: : ::: .. .: :.:. .:: :
NP_000 SWCFLRMRWAQPGGAA--FSLAYAGLVALLVAAIFLCNGSVTLSLCRMYRQQKRHQGSLG
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB8 RDCAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEKNRTS
:: : .:.:::.:::::::....::::. : . : .:
NP_000 -----PRPRTGE------DEVDHLILLALMTVVMAVCSLPLTIRCFTQAVAP-----DSS
230 240 250 260
310 320 330 340 350
pF1KB8 EEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFFHKIFIRPLRYRSRCSNSTNMESSL
: :: :.:: . :.:::.::.::. ::.
NP_000 SEMGDLLAFRFYAFNPILDPWVFILFRKAVFQRLKLWVCCLCLGPAHGDSQTPLSQLASG
270 280 290 300 310 320
NP_000 RRDPRAPSAPVGKEGSCVPLSAWGEGQVEPLPPTQQSSGSAVGTSSKAEASVACSLC
330 340 350 360 370 380
>>XP_016865148 (OMIM: 601586) PREDICTED: prostaglandin E (313 aa)
initn: 424 init1: 218 opt: 405 Z-score: 469.0 bits: 95.1 E(85289): 2.2e-19
Smith-Waterman score: 453; 36.9% identity (67.8% similar) in 236 aa overlap (1-234:1-219)
10 20 30 40 50
pF1KB8 MKSPFYRCQNTTSVEKGNSAV-MGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPS
:..: . . : .. :: : . .:.: :..:::.:. .: .: :. . .
XP_016 MSTPGVNSSASLSPDRLNSPVTIPAVMFIFGVVGNLVAIVVLCKS------RKEQKE--T
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 VFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSS
.:: :::::.:::::: :.:::..:.: ... :. . ::. .:.. ::.::.
XP_016 TFYTLVCGLAVTDLLGTLLVSPVTIATYMKGQ-----WPG-GQPLCEYSTFILLFFSLSG
60 70 80 90 100
120 130 140 150 160 170
pF1KB8 TLQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKF-VQYC
. ::..: .:...: .:: ... ::..:. .: : .. ::::: ::.:. .::
XP_016 LSIICAMSVERYLAINHAYFYSHYVDKRLAGLTLFAVYASNVLFCALPNMGLGSSRLQY-
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB8 PGTWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRS
: :::::. . . . .. :: .:... ..:.:::::::. . : :::...:
XP_016 PDTWCFIDWTTNVTAHAA--YSYMYAGFSSFLILATVLCNVLVCGALLRMHRQFMRRTSL
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB8 CTRDCAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEKNR
XP_016 GTEQHHAAAAASVASRGHPAASPALPRLSDFRRRRSFRRIAGAEIQMVILLIATSLVVLI
230 240 250 260 270 280
>>XP_016865147 (OMIM: 601586) PREDICTED: prostaglandin E (325 aa)
initn: 424 init1: 218 opt: 405 Z-score: 468.8 bits: 95.2 E(85289): 2.3e-19
Smith-Waterman score: 453; 36.9% identity (67.8% similar) in 236 aa overlap (1-234:1-219)
10 20 30 40 50
pF1KB8 MKSPFYRCQNTTSVEKGNSAV-MGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPS
:..: . . : .. :: : . .:.: :..:::.:. .: .: :. . .
XP_016 MSTPGVNSSASLSPDRLNSPVTIPAVMFIFGVVGNLVAIVVLCKS------RKEQKE--T
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 VFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSS
.:: :::::.:::::: :.:::..:.: ... :. . ::. .:.. ::.::.
XP_016 TFYTLVCGLAVTDLLGTLLVSPVTIATYMKGQ-----WPG-GQPLCEYSTFILLFFSLSG
60 70 80 90 100
120 130 140 150 160 170
pF1KB8 TLQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKF-VQYC
. ::..: .:...: .:: ... ::..:. .: : .. ::::: ::.:. .::
XP_016 LSIICAMSVERYLAINHAYFYSHYVDKRLAGLTLFAVYASNVLFCALPNMGLGSSRLQY-
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB8 PGTWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRS
: :::::. . . . .. :: .:... ..:.:::::::. . : :::...:
XP_016 PDTWCFIDWTTNVTAHAA--YSYMYAGFSSFLILATVLCNVLVCGALLRMHRQFMRRTSL
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB8 CTRDCAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEKNR
XP_016 GTEQHHAAAAASVASRGHPAASPALPRLSDFRRRRSFRRIAGAEIQMVILLIATSLVVLI
230 240 250 260 270 280
>>XP_016865146 (OMIM: 601586) PREDICTED: prostaglandin E (326 aa)
initn: 424 init1: 218 opt: 405 Z-score: 468.8 bits: 95.2 E(85289): 2.3e-19
Smith-Waterman score: 456; 31.9% identity (61.6% similar) in 307 aa overlap (1-283:1-290)
10 20 30 40 50
pF1KB8 MKSPFYRCQNTTSVEKGNSAV-MGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPS
:..: . . : .. :: : . .:.: :..:::.:. .: .: :. . .
XP_016 MSTPGVNSSASLSPDRLNSPVTIPAVMFIFGVVGNLVAIVVLCKS------RKEQKE--T
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 VFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSS
.:: :::::.:::::: :.:::..:.: ... :. . ::. .:.. ::.::.
XP_016 TFYTLVCGLAVTDLLGTLLVSPVTIATYMKGQ-----WPG-GQPLCEYSTFILLFFSLSG
60 70 80 90 100
120 130 140 150 160 170
pF1KB8 TLQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKF-VQYC
. ::..: .:...: .:: ... ::..:. .: : .. ::::: ::.:. .::
XP_016 LSIICAMSVERYLAINHAYFYSHYVDKRLAGLTLFAVYASNVLFCALPNMGLGSSRLQY-
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB8 PGTWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRS
: :::::. . . . .. :: .:... ..:.:::::::. . : :::...:.
XP_016 PDTWCFIDWTTNVTAHAA--YSYMYAGFSSFLILATVLCNVLVCGALLRMHRQFMRRTSL
170 180 190 200 210 220
240 250 260 270
pF1KB8 CTRD-----CAEPRADGREASPQPLE-----------------ELDHLLLLALMTVLFTM
:.. : . :. :. : :.. ..:: ... .
XP_016 GTEQHHAAAAASVASRGHPAASPALPRLSDFRRRRSFRRIAGAEIQMVILLIATSLVVLI
230 240 250 260 270 280
280 290 300 310 320 330
pF1KB8 CSLPVIYRAYYGAFKDVKEKNRTSEEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFFH
::.:...
XP_016 CSIPLVFPKLQMKNLYHSATYRVAIGASIRQPVISAKFGARSQ
290 300 310 320
359 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 16:46:02 2016 done: Fri Nov 4 16:46:03 2016
Total Scan time: 7.510 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]