Result of FASTA (omim) for
pF1KB8963
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8963, 350 aa
1>>>pF1KB8963 350 - 350 aa - 350 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.5207+/-0.000472; mu= 20.9235+/- 0.029
mean_var=109.8579+/-26.458, 0's: 0 Z-trim(110.0): 708 B-trim: 864 in 1/48
Lambda= 0.122365
statistics sampled from 17505 (18319) to 17505 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.566), E-opt: 0.2 (0.215), width: 16
Scan time: 7.480
The best scores are: opt bits E(85289)
NP_005949 (OMIM: 600665) melatonin receptor type 1 ( 350) 2315 420.3 3.2e-117
XP_011530304 (OMIM: 600665) PREDICTED: melatonin r ( 265) 1777 325.1 1.1e-88
NP_005950 (OMIM: 125853,600804) melatonin receptor ( 362) 1392 257.3 3.7e-68
XP_011541141 (OMIM: 125853,600804) PREDICTED: mela ( 362) 1392 257.3 3.7e-68
XP_016873266 (OMIM: 125853,600804) PREDICTED: mela ( 320) 1212 225.5 1.3e-58
NP_004215 (OMIM: 300207) melatonin-related recepto ( 617) 1142 213.6 9.5e-55
NP_001471 (OMIM: 600377) galanin receptor type 1 [ ( 349) 451 91.2 3.7e-18
NP_001138757 (OMIM: 600018) mu-type opioid recepto ( 389) 451 91.3 3.9e-18
NP_001008504 (OMIM: 600018) mu-type opioid recepto ( 392) 451 91.3 3.9e-18
NP_001138755 (OMIM: 600018) mu-type opioid recepto ( 397) 451 91.3 3.9e-18
NP_000905 (OMIM: 600018) mu-type opioid receptor i ( 400) 451 91.3 3.9e-18
NP_001138756 (OMIM: 600018) mu-type opioid recepto ( 403) 451 91.3 4e-18
NP_001138754 (OMIM: 600018) mu-type opioid recepto ( 406) 451 91.3 4e-18
NP_001272452 (OMIM: 600018) mu-type opioid recepto ( 414) 451 91.3 4e-18
NP_001008503 (OMIM: 600018) mu-type opioid recepto ( 418) 451 91.3 4e-18
NP_001138758 (OMIM: 600018) mu-type opioid recepto ( 420) 451 91.3 4.1e-18
NP_001008505 (OMIM: 600018) mu-type opioid recepto ( 446) 451 91.4 4.2e-18
NP_001138751 (OMIM: 600018) mu-type opioid recepto ( 493) 451 91.4 4.4e-18
NP_001272453 (OMIM: 600018) mu-type opioid recepto ( 493) 451 91.4 4.4e-18
NP_004239 (OMIM: 600895) prolactin-releasing pepti ( 370) 431 87.7 4.4e-17
NP_001043 (OMIM: 182454) somatostatin receptor typ ( 388) 417 85.3 2.5e-16
NP_000902 (OMIM: 165195) delta-type opioid recepto ( 372) 416 85.1 2.7e-16
NP_001041 (OMIM: 182452) somatostatin receptor typ ( 369) 412 84.4 4.5e-16
NP_003848 (OMIM: 603691) galanin receptor type 2 [ ( 387) 407 83.5 8.4e-16
NP_001138753 (OMIM: 600018) mu-type opioid recepto ( 319) 401 82.3 1.6e-15
NP_000903 (OMIM: 165196) kappa-type opioid recepto ( 380) 399 82.1 2.2e-15
NP_001305426 (OMIM: 165196) kappa-type opioid rece ( 409) 399 82.1 2.3e-15
NP_001044 (OMIM: 182455) somatostatin receptor typ ( 364) 397 81.7 2.8e-15
NP_001166031 (OMIM: 182455) somatostatin receptor ( 364) 397 81.7 2.8e-15
NP_000904 (OMIM: 602548) nociceptin receptor isofo ( 370) 394 81.2 4e-15
NP_872588 (OMIM: 602548) nociceptin receptor isofo ( 370) 394 81.2 4e-15
NP_001186948 (OMIM: 602548) nociceptin receptor is ( 370) 394 81.2 4e-15
XP_016883343 (OMIM: 602548) PREDICTED: nociceptin ( 370) 394 81.2 4e-15
XP_011527130 (OMIM: 602548) PREDICTED: nociceptin ( 388) 394 81.2 4.1e-15
XP_016883341 (OMIM: 602548) PREDICTED: nociceptin ( 388) 394 81.2 4.1e-15
XP_016883342 (OMIM: 602548) PREDICTED: nociceptin ( 388) 394 81.2 4.1e-15
NP_001305782 (OMIM: 602548) nociceptin receptor is ( 399) 394 81.2 4.2e-15
NP_001272456 (OMIM: 600018) mu-type opioid recepto ( 292) 391 80.5 5.1e-15
NP_001138752 (OMIM: 600018) mu-type opioid recepto ( 300) 391 80.5 5.2e-15
NP_001138759 (OMIM: 600018) mu-type opioid recepto ( 300) 391 80.5 5.2e-15
XP_016866395 (OMIM: 600018) PREDICTED: mu-type opi ( 300) 391 80.5 5.2e-15
NP_001272455 (OMIM: 600018) mu-type opioid recepto ( 300) 391 80.5 5.2e-15
NP_001272457 (OMIM: 600018) mu-type opioid recepto ( 314) 391 80.5 5.3e-15
XP_016866394 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 391 80.6 5.6e-15
XP_011534158 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 391 80.6 5.6e-15
XP_011534164 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 391 80.6 5.6e-15
XP_011534155 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 391 80.6 5.6e-15
XP_016866393 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 391 80.6 5.6e-15
XP_016866392 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 391 80.6 5.6e-15
XP_011534153 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 391 80.6 5.6e-15
>>NP_005949 (OMIM: 600665) melatonin receptor type 1A [H (350 aa)
initn: 2315 init1: 2315 opt: 2315 Z-score: 2225.5 bits: 420.3 E(85289): 3.2e-117
Smith-Waterman score: 2315; 99.7% identity (99.7% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KB8 MQGNGSALPNASQPVLRGDGARPSWLASALACVLIFTIVVDILGNLLVILSVYRNKKLRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MQGNGSALPNASQPVLRGDGARPSWLASALACVLIFTIVVDILGNLLVILSVYRNKKLRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 AGNIFVVSLAVADLVVAIYPYPLVLMSIFNNGWNLGYLHCQVSGFLMGLSVIGSIFNITG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 AGNIFVVSLAVADLVVAIYPYPLVLMSIFNNGWNLGYLHCQVSGFLMGLSVIGSIFNITG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 IAINRYCYICHSLKYDKLYSSKNSLCYVLLIWLLTLAAVLPNLRAETLQYDPRIYSCTFA
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
NP_005 IAINRYCYICHSLKYDKLYSSKNSLCYVLLIWLLTLAAVLPNLRAGTLQYDPRIYSCTFA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 QSVSSAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQVRQRVKPDRKPKLKPQDFRNFVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QSVSSAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQVRQRVKPDRKPKLKPQDFRNFVTM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 FVVFVLFAICWAPLNFIGLAVASDPASMVPRIPEWLFVASYYMAYFNSCLNAIIYGLLNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FVVFVLFAICWAPLNFIGLAVASDPASMVPRIPEWLFVASYYMAYFNSCLNAIIYGLLNQ
250 260 270 280 290 300
310 320 330 340 350
pF1KB8 NFRKEYRRIIVSLCTARVFFVDSSNDVADRVKWKPSPLMTNNNVVKVDSV
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NFRKEYRRIIVSLCTARVFFVDSSNDVADRVKWKPSPLMTNNNVVKVDSV
310 320 330 340 350
>>XP_011530304 (OMIM: 600665) PREDICTED: melatonin recep (265 aa)
initn: 1777 init1: 1777 opt: 1777 Z-score: 1713.4 bits: 325.1 E(85289): 1.1e-88
Smith-Waterman score: 1777; 99.6% identity (99.6% similar) in 265 aa overlap (86-350:1-265)
60 70 80 90 100 110
pF1KB8 KKLRNAGNIFVVSLAVADLVVAIYPYPLVLMSIFNNGWNLGYLHCQVSGFLMGLSVIGSI
::::::::::::::::::::::::::::::
XP_011 MSIFNNGWNLGYLHCQVSGFLMGLSVIGSI
10 20 30
120 130 140 150 160 170
pF1KB8 FNITGIAINRYCYICHSLKYDKLYSSKNSLCYVLLIWLLTLAAVLPNLRAETLQYDPRIY
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
XP_011 FNITGIAINRYCYICHSLKYDKLYSSKNSLCYVLLIWLLTLAAVLPNLRAGTLQYDPRIY
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB8 SCTFAQSVSSAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQVRQRVKPDRKPKLKPQDFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SCTFAQSVSSAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQVRQRVKPDRKPKLKPQDFR
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB8 NFVTMFVVFVLFAICWAPLNFIGLAVASDPASMVPRIPEWLFVASYYMAYFNSCLNAIIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NFVTMFVVFVLFAICWAPLNFIGLAVASDPASMVPRIPEWLFVASYYMAYFNSCLNAIIY
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB8 GLLNQNFRKEYRRIIVSLCTARVFFVDSSNDVADRVKWKPSPLMTNNNVVKVDSV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLLNQNFRKEYRRIIVSLCTARVFFVDSSNDVADRVKWKPSPLMTNNNVVKVDSV
220 230 240 250 260
>>NP_005950 (OMIM: 125853,600804) melatonin receptor typ (362 aa)
initn: 1396 init1: 1373 opt: 1392 Z-score: 1344.7 bits: 257.3 E(85289): 3.7e-68
Smith-Waterman score: 1392; 61.2% identity (83.0% similar) in 335 aa overlap (3-337:24-350)
10 20 30
pF1KB8 MQGNGSALPNASQPVLRGDGARPSWLASALACVLIFTIV
: ::: :. . : :: :.: ::. ::: : .
NP_005 MSENGSFANCCEAGGWAVRPGWSGAGSARPSRT-P-------RPPWVAPALSAVLIVTTA
10 20 30 40 50
40 50 60 70 80 90
pF1KB8 VDILGNLLVILSVYRNKKLRNAGNIFVVSLAVADLVVAIYPYPLVLMSIFNNGWNLGYLH
::..::::::::: ::.:::::::.:.::::.::::::.:::::.:..:: .:: :: :
NP_005 VDVVGNLLVILSVLRNRKLRNAGNLFLVSLALADLVVAFYPYPLILVAIFYDGWALGEEH
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB8 CQVSGFLMGLSVIGSIFNITGIAINRYCYICHSLKYDKLYSSKNSLCYVLLIWLLTLAAV
:..:.:.::::::::.::::.::::::::::::. : ..: .. .. ::::::..:.
NP_005 CKASAFVMGLSVIGSVFNITAIAINRYCYICHSMAYHRIYRRWHTPLHICLIWLLTVVAL
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB8 LPNLRAETLQYDPRIYSCTFAQSVSSAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQVRQ
:::. . .:.:::::::::: :..:. :: ::::.:::.:. .: :::::::.::::.:.
NP_005 LPNFFVGSLEYDPRIYSCTFIQTASTQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQARR
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB8 RVKPDRKPKLKPQDFRNFVTMFVVFVLFAICWAPLNFIGLAVASDPASMVPRIPEWLFVA
..::. . :::.:.:.:.:::::::.::::::::: :::::: .: :.:.::: :::.
NP_005 KAKPESRLCLKPSDLRSFLTMFVVFVIFAICWAPLNCIGLAVAINPQEMAPQIPEGLFVT
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB8 SYYMAYFNSCLNAIIYGLLNQNFRKEYRRIIVSLCTARVFFVDSSNDVADRVKWKPSPLM
:: .::::::::::.:::::::::.::.::...: . : . :.:. . .:.:
NP_005 SYLLAYFNSCLNAIVYGLLNQNFRREYKRILLALWNPRHCIQDASKGSHAEGLQSPAPPI
300 310 320 330 340 350
340 350
pF1KB8 TNNNVVKVDSV
NP_005 IGVQHQADAL
360
>>XP_011541141 (OMIM: 125853,600804) PREDICTED: melatoni (362 aa)
initn: 1396 init1: 1373 opt: 1392 Z-score: 1344.7 bits: 257.3 E(85289): 3.7e-68
Smith-Waterman score: 1392; 61.2% identity (83.0% similar) in 335 aa overlap (3-337:24-350)
10 20 30
pF1KB8 MQGNGSALPNASQPVLRGDGARPSWLASALACVLIFTIV
: ::: :. . : :: :.: ::. ::: : .
XP_011 MSENGSFANCCEAGGWAVRPGWSGAGSARPSRT-P-------RPPWVAPALSAVLIVTTA
10 20 30 40 50
40 50 60 70 80 90
pF1KB8 VDILGNLLVILSVYRNKKLRNAGNIFVVSLAVADLVVAIYPYPLVLMSIFNNGWNLGYLH
::..::::::::: ::.:::::::.:.::::.::::::.:::::.:..:: .:: :: :
XP_011 VDVVGNLLVILSVLRNRKLRNAGNLFLVSLALADLVVAFYPYPLILVAIFYDGWALGEEH
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB8 CQVSGFLMGLSVIGSIFNITGIAINRYCYICHSLKYDKLYSSKNSLCYVLLIWLLTLAAV
:..:.:.::::::::.::::.::::::::::::. : ..: .. .. ::::::..:.
XP_011 CKASAFVMGLSVIGSVFNITAIAINRYCYICHSMAYHRIYRRWHTPLHICLIWLLTVVAL
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB8 LPNLRAETLQYDPRIYSCTFAQSVSSAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQVRQ
:::. . .:.:::::::::: :..:. :: ::::.:::.:. .: :::::::.::::.:.
XP_011 LPNFFVGSLEYDPRIYSCTFIQTASTQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQARR
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB8 RVKPDRKPKLKPQDFRNFVTMFVVFVLFAICWAPLNFIGLAVASDPASMVPRIPEWLFVA
..::. . :::.:.:.:.:::::::.::::::::: :::::: .: :.:.::: :::.
XP_011 KAKPESRLCLKPSDLRSFLTMFVVFVIFAICWAPLNCIGLAVAINPQEMAPQIPEGLFVT
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB8 SYYMAYFNSCLNAIIYGLLNQNFRKEYRRIIVSLCTARVFFVDSSNDVADRVKWKPSPLM
:: .::::::::::.:::::::::.::.::...: . : . :.:. . .:.:
XP_011 SYLLAYFNSCLNAIVYGLLNQNFRREYKRILLALWNPRHCIQDASKGSHAEGLQSPAPPI
300 310 320 330 340 350
340 350
pF1KB8 TNNNVVKVDSV
XP_011 IGVQHQADAL
360
>>XP_016873266 (OMIM: 125853,600804) PREDICTED: melatoni (320 aa)
initn: 1218 init1: 1195 opt: 1212 Z-score: 1173.5 bits: 225.5 E(85289): 1.3e-58
Smith-Waterman score: 1212; 56.4% identity (81.4% similar) in 312 aa overlap (26-337:1-308)
10 20 30 40 50 60
pF1KB8 MQGNGSALPNASQPVLRGDGARPSWLASALACVLIFTIVVDILGNLLVILSVYRNKKLRN
.:... : .. ... : .: .. : .
XP_016 MATVFFCFPNSSMGISMAGA----MSFIHHCVLLE
10 20 30
70 80 90 100 110 120
pF1KB8 AGNIFVVSLAVADLVVAIYPYPLVLMSIFNNGWNLGYLHCQVSGFLMGLSVIGSIFNITG
::.:.::::.::::::.:::::.:..:: .:: :: ::..:.:.::::::::.::::.
XP_016 CGNLFLVSLALADLVVAFYPYPLILVAIFYDGWALGEEHCKASAFVMGLSVIGSVFNITA
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 IAINRYCYICHSLKYDKLYSSKNSLCYVLLIWLLTLAAVLPNLRAETLQYDPRIYSCTFA
::::::::::::. : ..: .. .. ::::::..:.:::. . .:.::::::::::
XP_016 IAINRYCYICHSMAYHRIYRRWHTPLHICLIWLLTVVALLPNFFVGSLEYDPRIYSCTFI
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 QSVSSAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQVRQRVKPDRKPKLKPQDFRNFVTM
:..:. :: ::::.:::.:. .: :::::::.::::.:...::. . :::.:.:.:.::
XP_016 QTASTQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQARRKAKPESRLCLKPSDLRSFLTM
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 FVVFVLFAICWAPLNFIGLAVASDPASMVPRIPEWLFVASYYMAYFNSCLNAIIYGLLNQ
:::::.::::::::: :::::: .: :.:.::: :::.:: .::::::::::.::::::
XP_016 FVVFVIFAICWAPLNCIGLAVAINPQEMAPQIPEGLFVTSYLLAYFNSCLNAIVYGLLNQ
220 230 240 250 260 270
310 320 330 340 350
pF1KB8 NFRKEYRRIIVSLCTARVFFVDSSNDVADRVKWKPSPLMTNNNVVKVDSV
:::.::.::...: . : . :.:. . .:.:
XP_016 NFRREYKRILLALWNPRHCIQDASKGSHAEGLQSPAPPIIGVQHQADAL
280 290 300 310 320
>>NP_004215 (OMIM: 300207) melatonin-related receptor [H (617 aa)
initn: 1134 init1: 780 opt: 1142 Z-score: 1103.9 bits: 213.6 E(85289): 9.5e-55
Smith-Waterman score: 1142; 51.1% identity (79.3% similar) in 305 aa overlap (23-327:24-326)
10 20 30 40 50
pF1KB8 MQGNGSALPNASQPVLRGDGARPSWLASALACVLIFTIVVDILGNLLVILSVYRNKKLR
: : . :....:::::..:: .:::.: .:::::
NP_004 MGPTLAVPTPYGCIGCKLPQPEYPPALIIFMFCAMVITIVVDLIGNSMVILAVTKNKKLR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 NAGNIFVVSLAVADLVVAIYPYPLVLMSIFNNGWNLGYLHCQVSGFLMGLSVIGSIFNIT
:.::::::::.:::..::::::::.: .. .::.:. :.::. ::. ::::.::::::.
NP_004 NSGNIFVVSLSVADMLVAIYPYPLMLHAMSIGGWDLSQLQCQMVGFITGLSVVGSIFNIV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 GIAINRYCYICHSLKYDKLYSSKNSLCYVLLIWLLTLAAVLPNLRAETLQYDPRIYSCTF
.:::::::::::::.:....: .:. :... :..:. :::::. :..:::: :.: :
NP_004 AIAINRYCYICHSLQYERIFSVRNTCIYLVITWIMTVLAVLPNMYIGTIEYDPRTYTCIF
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 AQSVSSAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQVRQRVKPDRKPKLKPQDFRNFVT
. ..:...: .::..:..:: :::.::: :: .:. ..: . . :::.:
NP_004 NYLNNPVFTVTIVCIHFVLPLLIVGFCYVRIWTKVLAARD--PAGQNPDNQLAEVRNFLT
190 200 210 220 230
240 250 260 270 280 290
pF1KB8 MFVVFVLFAICWAPLNFIGLAVASDPASMVPRIPEWLFVASYYMAYFNSCLNAIIYGLLN
:::.:.:::.:: :.: . . :: .: :. .::.::..:.:..:::::::::.::::::
NP_004 MFVIFLLFAVCWCPINVLTVLVAVSPKEMAGKIPNWLYLAAYFIAYFNSCLNAVIYGLLN
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB8 QNFRKEYRRIIVSLCTARVFFVDSSNDVADRVKWKPSPLMTNNNVVKVDSV
.:::.:: :. .. .:: .:.
NP_004 ENFRREYWTIFHAMRHPIIFFSGLISDIREMQEARTLARARAHARDQAREQDRAHACPAV
300 310 320 330 340 350
>>NP_001471 (OMIM: 600377) galanin receptor type 1 [Homo (349 aa)
initn: 285 init1: 210 opt: 451 Z-score: 447.1 bits: 91.2 E(85289): 3.7e-18
Smith-Waterman score: 451; 28.8% identity (61.1% similar) in 347 aa overlap (2-336:10-343)
10 20 30 40 50
pF1KB8 MQGNGS-ALPNASQP-VLRGDGARPSWLASALACVLIFTIVVDILGNLLVIL
.::.: : : .: : : :.. ... .. :::.. .::: :::
NP_001 MELAVGNLSEGNASWPEPPAPEPGPLFGIGVEN--FVTLVVFGLIFAL--GVLGNSLVIT
10 20 30 40 50
60 70 80 90 100
pF1KB8 SVYRNK--KLRNAGNIFVVSLAVADLVVAIYPYPLVLMSIFNNGWNLGYLHCQVSGFLMG
. :.: : :.. :.:...:..:::. .. :. : :: . :. ...
NP_001 VLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYALPTWVLGAFICKFIHYFFT
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB8 LSVIGSIFNITGIAINRYCYICHSLKYDKLYSSKNSLCYVLLIWLLTLAAVLPNLRAETL
.:.. :::........:: : :: . ..: :.:.: : :: :..: . : . :
NP_001 VSMLVSIFTLAAMSVDRYVAIVHSRRSSSLRVSRNALLGVGCIWALSIAMASPVAYHQGL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB8 QYDPRIYSCTFAQSV------SSAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQVRQRVK
. :: . :: ..::.. . :: .:.:.... ::: .. . ......:
NP_001 -FHPRASNQTFCWEQWPDPRHKKAYVVCTFVFGYLLPLLLICFCYAKV---LNHLHKKLK
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB8 PDRKPKLKPQDFRNFVTMFVVFVLFAICWAPLNFIGLAVASDPASMVPRIPEWLF-VASY
. . : . . .. :..:: :.:.: : : ..: : . ..: .:: ....
NP_001 -NMSKKSEASKKKTAQTVLVVVVVFGISWLPHHIIHLWAEFGVFPLTP--ASFLFRITAH
240 250 260 270 280
290 300 310 320 330 340
pF1KB8 YMAYFNSCLNAIIYGLLNQNFRKEYRRIIVSLCTARV-FFVDSSNDVADRVKWKPSPLMT
.:: :: .: :::..:..:::: :.... : : ...... .:. ::
NP_001 CLAYSNSSVNPIIYAFLSENFRKAYKQVF--KCHIRKDSHLSDTKESKSRIDTPPSTNCT
290 300 310 320 330 340
350
pF1KB8 NNNVVKVDSV
NP_001 HV
>>NP_001138757 (OMIM: 600018) mu-type opioid receptor is (389 aa)
initn: 331 init1: 117 opt: 451 Z-score: 446.6 bits: 91.3 E(85289): 3.9e-18
Smith-Waterman score: 451; 25.8% identity (59.6% similar) in 329 aa overlap (23-341:65-380)
10 20 30 40 50
pF1KB8 MQGNGSALPNASQPVLRGDGARPSWLASALACVLIFTIV--VDILGNLLVIL
:: . .:.. . ...:: : ..::.::.
NP_001 SHLDGNLSDPCGPNRTDLGGRDSLCPPTGSPS-MITAITIMALYSIVCVVGLFGNFLVMY
40 50 60 70 80 90
60 70 80 90 100 110
pF1KB8 SVYRNKKLRNAGNIFVVSLAVADLVVAIYPYPLVLMSIFNNGWNLGYLHCQVSGFLMGLS
. : :...: ::.. .::.:: ..: :. .. . . : .: . :.. . .
NP_001 VIVRYTKMKTATNIYIFNLALAD-ALATSTLPFQSVNYLMGTWPFGTILCKIVISIDYYN
100 110 120 130 140 150
120 130 140 150 160 170
pF1KB8 VIGSIFNITGIAINRYCYICHSLKYDKLYSSKNSLCYVLLIWLLTLAAVLPNLRAETLQY
.. :::.. ....:: .:: .: . . .:. . :.:. : :: . : .:
NP_001 MFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIINVCNWILSSAIGLPVMFMATTKY
160 170 180 190 200 210
180 190 200 210 220
pF1KB8 DPRIYSCTFAQSVSSAY-----TIAVVVFHFLVPMIIVIFCYLRIWILVLQVRQRVKPDR
.::.. : . : : : .: :..:..:. :: ...:.... :.
NP_001 RQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCY---GLMILRLKS-VRMLS
220 230 240 250 260
230 240 250 260 270 280
pF1KB8 KPKLKPQDFRNFVTM-FVVFVLFAICWAPLNF--IGLAVASDPASMVPRIPEWLFVASYY
: : ...: .. : .:: ..: .::.:... : :... : . . : : .
NP_001 GSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALVTIPETTFQTVS-WHFCIA--
270 280 290 300 310 320
290 300 310 320 330 340
pF1KB8 MAYFNSCLNAIIYGLLNQNFRKEYRRIIVSLCTARVFFVDSSNDVADRVKWKPSPLMTNN
..: ::::: ..:..:..::.. .:. .: ....:.. : . . : .:
NP_001 LGYTNSCLNPVLYAFLDENFKRCFRE----FCIPTSSNIEQQNSTRIRQNTRDHPSTANT
330 340 350 360 370 380
350
pF1KB8 NVVKVDSV
NP_001 VDRTNHQS
>>NP_001008504 (OMIM: 600018) mu-type opioid receptor is (392 aa)
initn: 331 init1: 117 opt: 451 Z-score: 446.6 bits: 91.3 E(85289): 3.9e-18
Smith-Waterman score: 451; 25.8% identity (59.6% similar) in 329 aa overlap (23-341:65-380)
10 20 30 40 50
pF1KB8 MQGNGSALPNASQPVLRGDGARPSWLASALACVLIFTIV--VDILGNLLVIL
:: . .:.. . ...:: : ..::.::.
NP_001 SHLDGNLSDPCGPNRTDLGGRDSLCPPTGSPS-MITAITIMALYSIVCVVGLFGNFLVMY
40 50 60 70 80 90
60 70 80 90 100 110
pF1KB8 SVYRNKKLRNAGNIFVVSLAVADLVVAIYPYPLVLMSIFNNGWNLGYLHCQVSGFLMGLS
. : :...: ::.. .::.:: ..: :. .. . . : .: . :.. . .
NP_001 VIVRYTKMKTATNIYIFNLALAD-ALATSTLPFQSVNYLMGTWPFGTILCKIVISIDYYN
100 110 120 130 140 150
120 130 140 150 160 170
pF1KB8 VIGSIFNITGIAINRYCYICHSLKYDKLYSSKNSLCYVLLIWLLTLAAVLPNLRAETLQY
.. :::.. ....:: .:: .: . . .:. . :.:. : :: . : .:
NP_001 MFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIINVCNWILSSAIGLPVMFMATTKY
160 170 180 190 200 210
180 190 200 210 220
pF1KB8 DPRIYSCTFAQSVSSAY-----TIAVVVFHFLVPMIIVIFCYLRIWILVLQVRQRVKPDR
.::.. : . : : : .: :..:..:. :: ...:.... :.
NP_001 RQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCY---GLMILRLKS-VRMLS
220 230 240 250 260
230 240 250 260 270 280
pF1KB8 KPKLKPQDFRNFVTM-FVVFVLFAICWAPLNF--IGLAVASDPASMVPRIPEWLFVASYY
: : ...: .. : .:: ..: .::.:... : :... : . . : : .
NP_001 GSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALVTIPETTFQTVS-WHFCIA--
270 280 290 300 310 320
290 300 310 320 330 340
pF1KB8 MAYFNSCLNAIIYGLLNQNFRKEYRRIIVSLCTARVFFVDSSNDVADRVKWKPSPLMTNN
..: ::::: ..:..:..::.. .:. .: ....:.. : . . : .:
NP_001 LGYTNSCLNPVLYAFLDENFKRCFRE----FCIPTSSNIEQQNSTRIRQNTRDHPSTANT
330 340 350 360 370 380
350
pF1KB8 NVVKVDSV
NP_001 VDRTNHQVRSL
390
>>NP_001138755 (OMIM: 600018) mu-type opioid receptor is (397 aa)
initn: 331 init1: 117 opt: 451 Z-score: 446.5 bits: 91.3 E(85289): 3.9e-18
Smith-Waterman score: 451; 25.8% identity (59.6% similar) in 329 aa overlap (23-341:65-380)
10 20 30 40 50
pF1KB8 MQGNGSALPNASQPVLRGDGARPSWLASALACVLIFTIV--VDILGNLLVIL
:: . .:.. . ...:: : ..::.::.
NP_001 SHLDGNLSDPCGPNRTDLGGRDSLCPPTGSPS-MITAITIMALYSIVCVVGLFGNFLVMY
40 50 60 70 80 90
60 70 80 90 100 110
pF1KB8 SVYRNKKLRNAGNIFVVSLAVADLVVAIYPYPLVLMSIFNNGWNLGYLHCQVSGFLMGLS
. : :...: ::.. .::.:: ..: :. .. . . : .: . :.. . .
NP_001 VIVRYTKMKTATNIYIFNLALAD-ALATSTLPFQSVNYLMGTWPFGTILCKIVISIDYYN
100 110 120 130 140 150
120 130 140 150 160 170
pF1KB8 VIGSIFNITGIAINRYCYICHSLKYDKLYSSKNSLCYVLLIWLLTLAAVLPNLRAETLQY
.. :::.. ....:: .:: .: . . .:. . :.:. : :: . : .:
NP_001 MFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIINVCNWILSSAIGLPVMFMATTKY
160 170 180 190 200 210
180 190 200 210 220
pF1KB8 DPRIYSCTFAQSVSSAY-----TIAVVVFHFLVPMIIVIFCYLRIWILVLQVRQRVKPDR
.::.. : . : : : .: :..:..:. :: ...:.... :.
NP_001 RQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCY---GLMILRLKS-VRMLS
220 230 240 250 260
230 240 250 260 270 280
pF1KB8 KPKLKPQDFRNFVTM-FVVFVLFAICWAPLNF--IGLAVASDPASMVPRIPEWLFVASYY
: : ...: .. : .:: ..: .::.:... : :... : . . : : .
NP_001 GSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALVTIPETTFQTVS-WHFCIA--
270 280 290 300 310 320
290 300 310 320 330 340
pF1KB8 MAYFNSCLNAIIYGLLNQNFRKEYRRIIVSLCTARVFFVDSSNDVADRVKWKPSPLMTNN
..: ::::: ..:..:..::.. .:. .: ....:.. : . . : .:
NP_001 LGYTNSCLNPVLYAFLDENFKRCFRE----FCIPTSSNIEQQNSTRIRQNTRDHPSTANT
330 340 350 360 370 380
350
pF1KB8 NVVKVDSV
NP_001 VDRTNHQRERRQKSDW
390
350 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 01:38:25 2016 done: Sat Nov 5 01:38:27 2016
Total Scan time: 7.480 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]