Result of FASTA (ccds) for
pF1KB8955
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8955, 332 aa
1>>>pF1KB8955 332 - 332 aa - 332 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3983+/-0.00111; mu= 15.3968+/- 0.066
mean_var=228.1571+/-116.004, 0's: 0 Z-trim(103.5): 360 B-trim: 872 in 2/50
Lambda= 0.084910
statistics sampled from 6868 (7441) to 6868 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.578), E-opt: 0.2 (0.229), width: 16
Scan time: 2.120
The best scores are: opt bits E(32554)
CCDS11173.1 ADORA2B gene_id:136|Hs108|chr17 ( 332) 2200 283.5 1.7e-76
CCDS13826.1 ADORA2A gene_id:135|Hs108|chr22 ( 412) 1274 170.2 2.6e-42
CCDS1434.1 ADORA1 gene_id:134|Hs108|chr1 ( 326) 903 124.6 1.1e-28
CCDS839.1 ADORA3 gene_id:140|Hs108|chr1 ( 318) 462 70.5 2e-12
>>CCDS11173.1 ADORA2B gene_id:136|Hs108|chr17 (332 aa)
initn: 2200 init1: 2200 opt: 2200 Z-score: 1487.1 bits: 283.5 E(32554): 1.7e-76
Smith-Waterman score: 2200; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:1-332)
10 20 30 40 50 60
pF1KB8 MLLETQDALYVALELVIAALSVAGNVLVCAAVGTANTLQTPTNYFLVSLAAADVAVGLFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MLLETQDALYVALELVIAALSVAGNVLVCAAVGTANTLQTPTNYFLVSLAAADVAVGLFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 IPFAITISLGFCTDFYGCLFLACFVLVLTQSSIFSLLAVAVDRYLAICVPLRYKSLVTGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IPFAITISLGFCTDFYGCLFLACFVLVLTQSSIFSLLAVAVDRYLAICVPLRYKSLVTGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 RARGVIAVLWVLAFGIGLTPFLGWNSKDSATNNCTEPWDGTTNESCCLVKCLFENVVPMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RARGVIAVLWVLAFGIGLTPFLGWNSKDSATNNCTEPWDGTTNESCCLVKCLFENVVPMS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 YMVYFNFFGCVLPPLLIMLVIYIKIFLVACRQLQRTELMDHSRTTLQREIHAAKSLAMIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YMVYFNFFGCVLPPLLIMLVIYIKIFLVACRQLQRTELMDHSRTTLQREIHAAKSLAMIV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 GIFALCWLPVHAVNCVTLFQPAQGKNKPKWAMNMAILLSHANSVVNPIVYAYRNRDFRYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GIFALCWLPVHAVNCVTLFQPAQGKNKPKWAMNMAILLSHANSVVNPIVYAYRNRDFRYT
250 260 270 280 290 300
310 320 330
pF1KB8 FHKIISRYLLCQADVKSGNGQAGVQPALGVGL
::::::::::::::::::::::::::::::::
CCDS11 FHKIISRYLLCQADVKSGNGQAGVQPALGVGL
310 320 330
>>CCDS13826.1 ADORA2A gene_id:135|Hs108|chr22 (412 aa)
initn: 1234 init1: 824 opt: 1274 Z-score: 873.2 bits: 170.2 E(32554): 2.6e-42
Smith-Waterman score: 1274; 59.4% identity (82.1% similar) in 330 aa overlap (8-329:7-328)
10 20 30 40 50 60
pF1KB8 MLLETQDALYVALELVIAALSVAGNVLVCAAVGTANTLQTPTNYFLVSLAAADVAVGLFA
..:...::.::.:.. :::::: :: ..::. ::::.:::::::.:::..:
CCDS13 MPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLA
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 IPFAITISLGFCTDFYGCLFLACFVLVLTQSSIFSLLAVAVDRYLAICVPLRYKSLVTGT
:::::::: :::. .::::.:::::::::::::::::.:.:::.:: .::::..:::::
CCDS13 IPFAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGT
60 70 80 90 100 110
130 140 150 160 170
pF1KB8 RARGVIAVLWVLAFGIGLTPFLGWNSKDSATNNCTEPWDGTTNESCC---LVKCLFENVV
::.:.::. :::.:.:::::.:::: :: .: .: .. . : : ::::.::
CCDS13 RAKGIIAICWVLSFAIGLTPMLGWN-------NCGQPKEGKNHSQGCGEGQVACLFEDVV
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 PMSYMVYFNFFGCVLPPLLIMLVIYIKIFLVACRQLQRTELM----DHSRTTLQREIHAA
::.::::::::.::: :::.:: .:..:::.: :::.. : . ...:.:::.:.:::
CCDS13 PMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 KSLAMIVGIFALCWLPVHAVNCVTLFQPAQGKNKPKWAMNMAILLSHANSVVNPIVYAYR
::::.:::.:::::::.: .:: :.: : . .. : : : .::.:::.::::::..::::
CCDS13 KSLAIIVGLFALCWLPLHIINCFTFFCP-DCSHAPLWLMYLAIVLSHTNSVVNPFIYAYR
240 250 260 270 280 290
300 310 320 330
pF1KB8 NRDFRYTFHKIISRYLLCQAD-VKSGNGQAGVQPALGVGL
:.:: ::.::: ..: : . :... .: : : :
CCDS13 IREFRQTFRKIIRSHVLRQQEPFKAAGTSARVLAAHGSDGEQVSLRLNGHPPGVWANGSA
300 310 320 330 340 350
CCDS13 PHPERRPNGYALGLVSGGSAQESQGNTGLPDVELLSHELKGVCPEPPGLDDPLAQDGAGV
360 370 380 390 400 410
>>CCDS1434.1 ADORA1 gene_id:134|Hs108|chr1 (326 aa)
initn: 740 init1: 472 opt: 903 Z-score: 628.5 bits: 124.6 E(32554): 1.1e-28
Smith-Waterman score: 903; 48.5% identity (74.6% similar) in 307 aa overlap (8-312:10-310)
10 20 30 40 50
pF1KB8 MLLETQDALYVALELVIAALSVAGNVLVCAAVGTANTLQTPTNYFLVSLAAADVAVGL
: :...:..:: .:: ::::: :: . ..:. : :.::::.::::::
CCDS14 MPPSISAFQAAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 FAIPFAITISLGFCTDFYGCLFLACFVLVLTQSSIFSLLAVAVDRYLAICVPLRYKSLVT
..::.:: :..: : :. ::..:: ::.::::::..:::.:::::: . .::::: .::
CCDS14 LVIPLAILINIGPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVT
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 GTRARGVIAVLWVLAFGIGLTPFLGWNSKDSATNNCTEPWDGTTNESCCLVKCLFENVVP
:: .:: :.:.: .::::..:::. ::.. . : .. . . ..:: ::.:.
CCDS14 PRRAAVAIAGCWILSFVVGLTPMFGWNNL-SAVE---RAWAANGSMGEPVIKCEFEKVIS
130 140 150 160 170
180 190 200 210 220 230
pF1KB8 MSYMVYFNFFGCVLPPLLIMLVIYIKIFLVACRQLQR--TELMDHSRTTLQREIHAAKSL
: :::::::: ::::::.:..::...: . .::.. . . .:.. ::::
CCDS14 MEYMVYFNFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 AMIVGIFALCWLPVHAVNCVTLFQPAQGKNKPKWAMNMAILLSHANSVVNPIVYAYRNRD
:.:. .::: :::.: .::.::: :. .::. .::.:.:.::..::::::.: .
CCDS14 ALILFLFALSWLPLHILNCITLFCPSC--HKPSILTYIAIFLTHGNSAMNPIVYAFRIQK
240 250 260 270 280 290
300 310 320 330
pF1KB8 FRYTFHKIISRYLLCQADVKSGNGQAGVQPALGVGL
:: :: :: . .. ::
CCDS14 FRVTFLKIWNDHFRCQPAPPIDEDLPEERPDD
300 310 320
>>CCDS839.1 ADORA3 gene_id:140|Hs108|chr1 (318 aa)
initn: 740 init1: 452 opt: 462 Z-score: 336.6 bits: 70.5 E(32554): 2e-12
Smith-Waterman score: 766; 39.3% identity (71.9% similar) in 313 aa overlap (3-312:8-304)
10 20 30 40 50
pF1KB8 MLLETQDALYVALELVIAALSVAGNVLVCAAVGTANTLQTPTNYFLVSLAAADVA
: .. :...:. :. ...::::: .: .::: : ::.:::: ::.:
CCDS83 MPNNSTALSLANVTYITMEIFIGLCAIVGNVLVICVVKLNPSLQTTTFYFIVSLALADIA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 VGLFAIPFAITISLGFCTDFYGCLFLACFVLVLTQSSIFSLLAVAVDRYLAICVPLRYKS
::....:.::..:::. ::.:::..:..:..:..::.::::.:::::: . . .:::
CCDS83 VGVLVMPLAIVVSLGITIHFYSCLFMTCLLLIFTHASIMSLLAIAVDRYLRVKLTVRYKR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 LVTGTRARGVIAVLWVLAFGIGLTPFLGWNSKDSATNNCTEPWDGTTNESCCLVKCLFEN
..: : .... :...: .::::..::: : .. . .. ...: : .
CCDS83 VTTHRRIWLALGLCWLVSFLVGLTPMFGWNMKLTSEYH----------RNVTFLSCQFVS
130 140 150 160 170
180 190 200 210 220 230
pF1KB8 VVPMSYMVYFNFFGCVLPPLLIMLVIYIKIFLVACRQLQRTELMDHSRTT---LQREIHA
:. :.:::::.:. .. ::..: .::. :: . .:. . ...:. : ::...
CCDS83 VMRMDYMVYFSFLTWIFIPLVVMCAIYLDIFYIIRNKLSLN--LSNSKETGAFYGREFKT
180 190 200 210 220
240 250 260 270 280 290
pF1KB8 AKSLAMIVGIFALCWLPVHAVNCVTLFQPAQGKNKPKWAMNMAILLSHANSVVNPIVYAY
:::: ... .::: :::. .::. :. :. :. .. :.::::::::..:::::::
CCDS83 AKSLFLVLFLFALSWLPLSIINCIIYFN---GEV-PQLVLYMGILLSHANSMMNPIVYAY
230 240 250 260 270 280
300 310 320 330
pF1KB8 RNRDFRYTFHKIISRYLLCQADVKSGNGQAGVQPALGVGL
. . :. :. :.. ..:.
CCDS83 KIKKFKETYLLILKACVVCHPSDSLDTSIEKNSE
290 300 310
332 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 16:40:17 2016 done: Fri Nov 4 16:40:17 2016
Total Scan time: 2.120 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]