Result of FASTA (omim) for
pF1KB8947
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8947, 314 aa
1>>>pF1KB8947 314 - 314 aa - 314 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2037+/-0.000395; mu= 16.2896+/- 0.025
mean_var=68.8923+/-14.433, 0's: 0 Z-trim(111.8): 22 B-trim: 1326 in 1/50
Lambda= 0.154521
statistics sampled from 20459 (20481) to 20459 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.604), E-opt: 0.2 (0.24), width: 16
Scan time: 8.160
The best scores are: opt bits E(85289)
NP_653165 (OMIM: 612168) zinc transporter ZIP3 iso ( 314) 1976 449.7 3.6e-126
NP_998733 (OMIM: 612168) zinc transporter ZIP3 iso ( 105) 455 110.3 1.8e-24
NP_055252 (OMIM: 604740) zinc transporter ZIP1 iso ( 324) 382 94.3 3.4e-19
NP_001258889 (OMIM: 604740) zinc transporter ZIP1 ( 324) 382 94.3 3.4e-19
NP_001258887 (OMIM: 604740) zinc transporter ZIP1 ( 324) 382 94.3 3.4e-19
NP_001258886 (OMIM: 604740) zinc transporter ZIP1 ( 324) 382 94.3 3.4e-19
NP_001258888 (OMIM: 604740) zinc transporter ZIP1 ( 324) 382 94.3 3.4e-19
NP_055394 (OMIM: 612166) zinc transporter ZIP2 iso ( 309) 355 88.3 2.2e-17
XP_016874029 (OMIM: 608735,612350) PREDICTED: zinc ( 364) 145 41.5 0.003
NP_689477 (OMIM: 608735,612350) zinc transporter Z ( 364) 145 41.5 0.003
XP_006718444 (OMIM: 608735,612350) PREDICTED: zinc ( 379) 145 41.6 0.0031
>>NP_653165 (OMIM: 612168) zinc transporter ZIP3 isoform (314 aa)
initn: 1976 init1: 1976 opt: 1976 Z-score: 2386.1 bits: 449.7 E(85289): 3.6e-126
Smith-Waterman score: 1976; 100.0% identity (100.0% similar) in 314 aa overlap (1-314:1-314)
10 20 30 40 50 60
pF1KB8 MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NALLPAVREKLQKVLSLGHISTDYPLAETILLLGFFMTVFLEQLILTFRKEKPSFIDLET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 NALLPAVREKLQKVLSLGHISTDYPLAETILLLGFFMTVFLEQLILTFRKEKPSFIDLET
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 FNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQGLSRASPVRLLSLAFALSAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 FNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQGLSRASPVRLLSLAFALSAH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 SVFEGLALGLQEEGEKVVSLFVGVAVHETLVAVALGISMARSAMPLRDAAKLAVTVSAMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 SVFEGLALGLQEEGEKVVSLFVGVAVHETLVAVALGISMARSAMPLRDAAKLAVTVSAMI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 PLGIGLGLGIESAQGVPGSVASVLLQGLAGGTFLFITFLEILAKELEEKSDRLLKVLFLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_653 PLGIGLGLGIESAQGVPGSVASVLLQGLAGGTFLFITFLEILAKELEEKSDRLLKVLFLV
250 260 270 280 290 300
310
pF1KB8 LGYTVLAGMVFLKW
::::::::::::::
NP_653 LGYTVLAGMVFLKW
310
>>NP_998733 (OMIM: 612168) zinc transporter ZIP3 isoform (105 aa)
initn: 478 init1: 454 opt: 455 Z-score: 560.5 bits: 110.3 E(85289): 1.8e-24
Smith-Waterman score: 455; 84.9% identity (93.0% similar) in 86 aa overlap (1-85:1-86)
10 20 30 40 50 60
pF1KB8 MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_998 MVKLLVAKILCMVGVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCF
10 20 30 40 50 60
70 80 90 100 110
pF1KB8 NALLPAVREKLQKVLSLGH-ISTDYPLAETILLLGFFMTVFLEQLILTFRKEKPSFIDLE
::::::::::.. .:. ..: .:
NP_998 NALLPAVREKVRAPWALAAALGTLWPRDSDAFSTLMPSSVKALML
70 80 90 100
>>NP_055252 (OMIM: 604740) zinc transporter ZIP1 isoform (324 aa)
initn: 598 init1: 346 opt: 382 Z-score: 465.5 bits: 94.3 E(85289): 3.4e-19
Smith-Waterman score: 575; 34.5% identity (66.1% similar) in 316 aa overlap (5-313:27-323)
10 20 30
pF1KB8 MVKLLVAKILCMVGVFFFMLLGSLLPVKIIE---TDFE
: .:. .: .. . :: ::.:. ... .. :
NP_055 MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB8 KAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETILLLGF
. .: ::: . :.::::::::. ::: ....:. :.. ..:: : :: .::
NP_055 GSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQFPLQEFILAMGF
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 FMTVFLEQLILTFRKEK-PSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGH-
:... .::. :...... :: :: : ..: . : : :
NP_055 FLVLVMEQITLAYKEQSGPS--PLEETRA-------------LLGTVNGG----PQHWHD
130 140 150 160
160 170 180 190 200 210
pF1KB8 GPSLSVQGLSRASP--VRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAVHETLV
::.. . . :.: .: :.:.:. ::::::::.:::.. ... : ... .:. ..
NP_055 GPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGIL
170 180 190 200 210 220
220 230 240 250 260 270
pF1KB8 AVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPGSVASVLLQGLAGG
::.:.. . .: . . .: .. : : ::::::: .. . : ..:. .:.:.:.:
NP_055 AVSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAALAESAGPLHQLAQSVLEGMAAG
230 240 250 260 270 280
280 290 300 310
pF1KB8 TFLFITFLEILAKELEEKSDRLLKVLFLVLGYTVLAGMVFLKW
:::.::::::: .:: . .:.:::..:. :...:.:..:..
NP_055 TFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI
290 300 310 320
>>NP_001258889 (OMIM: 604740) zinc transporter ZIP1 isof (324 aa)
initn: 598 init1: 346 opt: 382 Z-score: 465.5 bits: 94.3 E(85289): 3.4e-19
Smith-Waterman score: 575; 34.5% identity (66.1% similar) in 316 aa overlap (5-313:27-323)
10 20 30
pF1KB8 MVKLLVAKILCMVGVFFFMLLGSLLPVKIIE---TDFE
: .:. .: .. . :: ::.:. ... .. :
NP_001 MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB8 KAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETILLLGF
. .: ::: . :.::::::::. ::: ....:. :.. ..:: : :: .::
NP_001 GSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQFPLQEFILAMGF
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 FMTVFLEQLILTFRKEK-PSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGH-
:... .::. :...... :: :: : ..: . : : :
NP_001 FLVLVMEQITLAYKEQSGPS--PLEETRA-------------LLGTVNGG----PQHWHD
130 140 150 160
160 170 180 190 200 210
pF1KB8 GPSLSVQGLSRASP--VRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAVHETLV
::.. . . :.: .: :.:.:. ::::::::.:::.. ... : ... .:. ..
NP_001 GPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGIL
170 180 190 200 210 220
220 230 240 250 260 270
pF1KB8 AVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPGSVASVLLQGLAGG
::.:.. . .: . . .: .. : : ::::::: .. . : ..:. .:.:.:.:
NP_001 AVSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAALAESAGPLHQLAQSVLEGMAAG
230 240 250 260 270 280
280 290 300 310
pF1KB8 TFLFITFLEILAKELEEKSDRLLKVLFLVLGYTVLAGMVFLKW
:::.::::::: .:: . .:.:::..:. :...:.:..:..
NP_001 TFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI
290 300 310 320
>>NP_001258887 (OMIM: 604740) zinc transporter ZIP1 isof (324 aa)
initn: 598 init1: 346 opt: 382 Z-score: 465.5 bits: 94.3 E(85289): 3.4e-19
Smith-Waterman score: 575; 34.5% identity (66.1% similar) in 316 aa overlap (5-313:27-323)
10 20 30
pF1KB8 MVKLLVAKILCMVGVFFFMLLGSLLPVKIIE---TDFE
: .:. .: .. . :: ::.:. ... .. :
NP_001 MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB8 KAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETILLLGF
. .: ::: . :.::::::::. ::: ....:. :.. ..:: : :: .::
NP_001 GSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQFPLQEFILAMGF
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 FMTVFLEQLILTFRKEK-PSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGH-
:... .::. :...... :: :: : ..: . : : :
NP_001 FLVLVMEQITLAYKEQSGPS--PLEETRA-------------LLGTVNGG----PQHWHD
130 140 150 160
160 170 180 190 200 210
pF1KB8 GPSLSVQGLSRASP--VRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAVHETLV
::.. . . :.: .: :.:.:. ::::::::.:::.. ... : ... .:. ..
NP_001 GPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGIL
170 180 190 200 210 220
220 230 240 250 260 270
pF1KB8 AVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPGSVASVLLQGLAGG
::.:.. . .: . . .: .. : : ::::::: .. . : ..:. .:.:.:.:
NP_001 AVSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAALAESAGPLHQLAQSVLEGMAAG
230 240 250 260 270 280
280 290 300 310
pF1KB8 TFLFITFLEILAKELEEKSDRLLKVLFLVLGYTVLAGMVFLKW
:::.::::::: .:: . .:.:::..:. :...:.:..:..
NP_001 TFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI
290 300 310 320
>>NP_001258886 (OMIM: 604740) zinc transporter ZIP1 isof (324 aa)
initn: 598 init1: 346 opt: 382 Z-score: 465.5 bits: 94.3 E(85289): 3.4e-19
Smith-Waterman score: 575; 34.5% identity (66.1% similar) in 316 aa overlap (5-313:27-323)
10 20 30
pF1KB8 MVKLLVAKILCMVGVFFFMLLGSLLPVKIIE---TDFE
: .:. .: .. . :: ::.:. ... .. :
NP_001 MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB8 KAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETILLLGF
. .: ::: . :.::::::::. ::: ....:. :.. ..:: : :: .::
NP_001 GSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQFPLQEFILAMGF
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 FMTVFLEQLILTFRKEK-PSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGH-
:... .::. :...... :: :: : ..: . : : :
NP_001 FLVLVMEQITLAYKEQSGPS--PLEETRA-------------LLGTVNGG----PQHWHD
130 140 150 160
160 170 180 190 200 210
pF1KB8 GPSLSVQGLSRASP--VRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAVHETLV
::.. . . :.: .: :.:.:. ::::::::.:::.. ... : ... .:. ..
NP_001 GPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGIL
170 180 190 200 210 220
220 230 240 250 260 270
pF1KB8 AVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPGSVASVLLQGLAGG
::.:.. . .: . . .: .. : : ::::::: .. . : ..:. .:.:.:.:
NP_001 AVSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAALAESAGPLHQLAQSVLEGMAAG
230 240 250 260 270 280
280 290 300 310
pF1KB8 TFLFITFLEILAKELEEKSDRLLKVLFLVLGYTVLAGMVFLKW
:::.::::::: .:: . .:.:::..:. :...:.:..:..
NP_001 TFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI
290 300 310 320
>>NP_001258888 (OMIM: 604740) zinc transporter ZIP1 isof (324 aa)
initn: 598 init1: 346 opt: 382 Z-score: 465.5 bits: 94.3 E(85289): 3.4e-19
Smith-Waterman score: 575; 34.5% identity (66.1% similar) in 316 aa overlap (5-313:27-323)
10 20 30
pF1KB8 MVKLLVAKILCMVGVFFFMLLGSLLPVKIIE---TDFE
: .:. .: .. . :: ::.:. ... .. :
NP_001 MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB8 KAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETILLLGF
. .: ::: . :.::::::::. ::: ....:. :.. ..:: : :: .::
NP_001 GSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQFPLQEFILAMGF
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 FMTVFLEQLILTFRKEK-PSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGH-
:... .::. :...... :: :: : ..: . : : :
NP_001 FLVLVMEQITLAYKEQSGPS--PLEETRA-------------LLGTVNGG----PQHWHD
130 140 150 160
160 170 180 190 200 210
pF1KB8 GPSLSVQGLSRASP--VRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAVHETLV
::.. . . :.: .: :.:.:. ::::::::.:::.. ... : ... .:. ..
NP_001 GPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGIL
170 180 190 200 210 220
220 230 240 250 260 270
pF1KB8 AVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPGSVASVLLQGLAGG
::.:.. . .: . . .: .. : : ::::::: .. . : ..:. .:.:.:.:
NP_001 AVSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAALAESAGPLHQLAQSVLEGMAAG
230 240 250 260 270 280
280 290 300 310
pF1KB8 TFLFITFLEILAKELEEKSDRLLKVLFLVLGYTVLAGMVFLKW
:::.::::::: .:: . .:.:::..:. :...:.:..:..
NP_001 TFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI
290 300 310 320
>>NP_055394 (OMIM: 612166) zinc transporter ZIP2 isoform (309 aa)
initn: 352 init1: 153 opt: 355 Z-score: 433.3 bits: 88.3 E(85289): 2.2e-17
Smith-Waterman score: 423; 32.1% identity (60.9% similar) in 327 aa overlap (1-307:1-303)
10 20 30 40 50
pF1KB8 MVKLLVAKILCMVGVFFFMLLGSLLPV--KIIETDFEKAHRSKKILSLCNTFGGGVFLAT
: .:: :. :. ... . : .: :. : .. : ..:. . .: : . ...::::..
NP_055 MEQLLGIKLGCLFALLALTLGCGLTPICFKWFQIDAARGHH-RLVLRLLGCISAGVFLGA
10 20 30 40 50
60 70 80 90 100
pF1KB8 CFNAL----LPAVREKLQKVL----------SLGHIST---DYPLAETILLLGFFMTVFL
: . : .. ..:: . : : .. .:: .: :. ::::.. ::
NP_055 GFMHMTAEALEEIESQIQKFMVQNRSASERNSSGDADSAHMEYPYGELIISLGFFFVFFL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB8 EQLILTFRKEKPSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQG
:.: : . :. ::... .: :. ::: : . .. ::: :: : .:
NP_055 ESLAL---QCCPG-------AAGGSTVQDEEW-----GGA--HIFELHSHGHLPSPS-KG
120 130 140 150 160
170 180 190 200 210 220
pF1KB8 LSRASPVRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAVHETLVAVALGISMAR
:.: : : ..:: ::::::::.::: .:.: ..: .:. ::. ..:. ...
NP_055 -----PLRALVLLLSLSFHSVFEGLAVGLQPTVAATVQLCLAVLAHKGLVVFGVGMRLVH
170 180 190 200 210
230 240 250 260 270 280
pF1KB8 SAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPG-SVASVLLQGLAGGTFLFITFLE
. : :. . .. : :::...::.. .... : ..:...:.:.:.::::..::::
NP_055 LGTSSRWAVFSILLLALMSPLGLAVGLAVTGGDSEGGRGLAQAVLEGVAAGTFLYVTFLE
220 230 240 250 260 270
290 300 310
pF1KB8 ILAKELEEKSDRLLKVLFLVLGYTVLAGMVFLKW
:: .:: : : .. :.. .:
NP_055 ILPRELASPEAPLAKWSCVAAGFAFMAFIALWA
280 290 300
>>XP_016874029 (OMIM: 608735,612350) PREDICTED: zinc tra (364 aa)
initn: 62 init1: 62 opt: 145 Z-score: 179.2 bits: 41.5 E(85289): 0.003
Smith-Waterman score: 153; 24.7% identity (56.4% similar) in 312 aa overlap (1-306:69-356)
10 20 30
pF1KB8 MVKLLVAKILCMVGVFFFMLLGSLLPVKII
. .:: . .. . ::: .... : . .
XP_016 SRGTATACRLDNKESESWGALLSGERLDTWICSLLGSLMVGLSGVFPLLVIP--LEMGTM
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB8 ETDFEKAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETI
. : : :..::. ..:: .:.. : ::: : . : . . : .
XP_016 LRSEAGAWRLKQLLSF--ALGG--LLGNVFLHLLP---EAWAYTCSASPGGEGQSLQQQ-
100 110 120 130 140
100 110 120 130 140 150
pF1KB8 LLLGFFMTVFLEQLILTFRKEKPSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEP
::... . :::: . :.: . .... ..: . ..: :: : ..:
XP_016 QQLGLWVIAG----ILTFLALEKMFLDSKEEGTSQAPNKDPTAAAAALNG--GHCL-AQP
150 160 170 180 190 200
160 170 180 190 200
pF1KB8 HGHGPSLS--VQGLSRASPVRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAV--
.. :.:. :.... .. . :: : . . .:::.. . : ..:.. .:.
XP_016 AAE-PGLGAVVRSIKVSGYLNLL----ANTIDNFTHGLAVAASFLVSKKIGLLTTMAILL
210 220 230 240 250
210 220 230 240 250 260
pF1KB8 HETLVAVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPGSVASVLLQ
:: :. . :... .:::: .... :: :... .: .:: ..: ::
XP_016 HEIPHEVGDFAILLRAGFDRWSAAKLQLSTALGGLLGAGFAICTQSPKGVEETAAWVL--
260 270 280 290 300 310
270 280 290 300 310
pF1KB8 GLAGGTFLFITFLEILAKELEEKSD--RLLKVLFLVLGYTVLAGMVFLKW
...: ::.:.....: :::.. : ..:.: : .:.
XP_016 PFTSGGFLYIALVNVLPDLLEEEDPWRSLQQLLLLCAGIVVMVLFSLFVD
320 330 340 350 360
>>NP_689477 (OMIM: 608735,612350) zinc transporter ZIP13 (364 aa)
initn: 62 init1: 62 opt: 145 Z-score: 179.2 bits: 41.5 E(85289): 0.003
Smith-Waterman score: 153; 24.7% identity (56.4% similar) in 312 aa overlap (1-306:69-356)
10 20 30
pF1KB8 MVKLLVAKILCMVGVFFFMLLGSLLPVKII
. .:: . .. . ::: .... : . .
NP_689 SRGTATACRLDNKESESWGALLSGERLDTWICSLLGSLMVGLSGVFPLLVIP--LEMGTM
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB8 ETDFEKAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETI
. : : :..::. ..:: .:.. : ::: : . : . . : .
NP_689 LRSEAGAWRLKQLLSF--ALGG--LLGNVFLHLLP---EAWAYTCSASPGGEGQSLQQQ-
100 110 120 130 140
100 110 120 130 140 150
pF1KB8 LLLGFFMTVFLEQLILTFRKEKPSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEP
::... . :::: . :.: . .... ..: . ..: :: : ..:
NP_689 QQLGLWVIAG----ILTFLALEKMFLDSKEEGTSQAPNKDPTAAAAALNG--GHCL-AQP
150 160 170 180 190 200
160 170 180 190 200
pF1KB8 HGHGPSLS--VQGLSRASPVRLLSLAFALSAHSVFEGLALGLQEEGEKVVSLFVGVAV--
.. :.:. :.... .. . :: : . . .:::.. . : ..:.. .:.
NP_689 AAE-PGLGAVVRSIKVSGYLNLL----ANTIDNFTHGLAVAASFLVSKKIGLLTTMAILL
210 220 230 240 250
210 220 230 240 250 260
pF1KB8 HETLVAVALGISMARSAMPLRDAAKLAVTVSAMIPLGIGLGLGIESAQGVPGSVASVLLQ
:: :. . :... .:::: .... :: :... .: .:: ..: ::
NP_689 HEIPHEVGDFAILLRAGFDRWSAAKLQLSTALGGLLGAGFAICTQSPKGVEETAAWVL--
260 270 280 290 300 310
270 280 290 300 310
pF1KB8 GLAGGTFLFITFLEILAKELEEKSD--RLLKVLFLVLGYTVLAGMVFLKW
...: ::.:.....: :::.. : ..:.: : .:.
NP_689 PFTSGGFLYIALVNVLPDLLEEEDPWRSLQQLLLLCAGIVVMVLFSLFVD
320 330 340 350 360
314 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 16:38:03 2016 done: Fri Nov 4 16:38:04 2016
Total Scan time: 8.160 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]