Result of FASTA (omim) for
pF1KB8934
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8934, 284 aa
1>>>pF1KB8934 284 - 284 aa - 284 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4258+/-0.000348; mu= 9.0402+/- 0.022
mean_var=235.2644+/-48.095, 0's: 0 Z-trim(122.4): 143 B-trim: 31 in 1/54
Lambda= 0.083617
statistics sampled from 40261 (40438) to 40261 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.797), E-opt: 0.2 (0.474), width: 16
Scan time: 8.470
The best scores are: opt bits E(85289)
NP_006352 (OMIM: 604607) homeobox protein Hox-B13 ( 284) 1992 252.4 7.4e-67
NP_059106 (OMIM: 142976,614931) homeobox protein H ( 330) 848 114.4 2.8e-25
NP_000513 (OMIM: 140000,142959,176305) homeobox pr ( 388) 714 98.4 2.3e-20
NP_000514 (OMIM: 113200,113300,142989,186000,18630 ( 343) 669 92.9 9.2e-19
XP_011509370 (OMIM: 113200,113300,142989,186000,18 ( 324) 391 59.3 1.1e-08
NP_776272 (OMIM: 142975) homeobox protein Hox-C12 ( 282) 292 47.3 4e-05
NP_076922 (OMIM: 142964) homeobox protein Hox-B9 [ ( 250) 266 44.1 0.00033
NP_067015 (OMIM: 142986) homeobox protein Hox-D11 ( 338) 261 43.6 0.0006
NP_067016 (OMIM: 142988) homeobox protein Hox-D12 ( 270) 256 42.9 0.00079
NP_055027 (OMIM: 605559) homeobox protein Hox-C11 ( 304) 256 43.0 0.00085
NP_055028 (OMIM: 142982) homeobox protein Hox-D9 [ ( 352) 254 42.8 0.0011
XP_005257343 (OMIM: 142963) PREDICTED: homeobox pr ( 242) 250 42.1 0.0012
NP_002439 (OMIM: 106600,142983,189500,608874) home ( 303) 247 41.9 0.0018
NP_005514 (OMIM: 142958,605432) homeobox protein H ( 313) 246 41.8 0.002
XP_016880053 (OMIM: 142963) PREDICTED: homeobox pr ( 243) 244 41.4 0.002
NP_076921 (OMIM: 142963) homeobox protein Hox-B8 [ ( 243) 244 41.4 0.002
NP_008828 (OMIM: 142971) homeobox protein Hox-C9 [ ( 260) 242 41.2 0.0025
NP_002139 (OMIM: 142984,192950) homeobox protein H ( 340) 237 40.7 0.0045
NP_061824 (OMIM: 142957) homeobox protein Hox-A10 ( 410) 238 41.0 0.0046
NP_004518 (OMIM: 214300,600147) homeobox protein M ( 254) 230 39.7 0.0067
NP_689952 (OMIM: 142956) homeobox protein Hox-A9 [ ( 272) 228 39.5 0.0082
>>NP_006352 (OMIM: 604607) homeobox protein Hox-B13 [Hom (284 aa)
initn: 1992 init1: 1992 opt: 1992 Z-score: 1321.3 bits: 252.4 E(85289): 7.4e-67
Smith-Waterman score: 1992; 100.0% identity (100.0% similar) in 284 aa overlap (1-284:1-284)
10 20 30 40 50 60
pF1KB8 MEPGNYATLDGAKDIEGLLGAGGGRNLVAHSPLTSHPAAPTLMPAVNYAPLDLPGSAEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MEPGNYATLDGAKDIEGLLGAGGGRNLVAHSPLTSHPAAPTLMPAVNYAPLDLPGSAEPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KQCHPCPGVPQGTSPAPVPYGYFGGGYYSCRVSRSSLKPCAQAATLAAYPAETPTAGEEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KQCHPCPGVPQGTSPAPVPYGYFGGGYYSCRVSRSSLKPCAQAATLAAYPAETPTAGEEY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 PSRPTEFAFYPGYPGTYQPMASYLDVSVVQTLGAPGEPRHDSLLPVDSYQSWALAGGWNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PSRPTEFAFYPGYPGTYQPMASYLDVSVVQTLGAPGEPRHDSLLPVDSYQSWALAGGWNS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 QMCCQGEQNPPGPFWKAAFADSSGQHPPDACAFRRGRKKRIPYSKGQLRELEREYAANKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QMCCQGEQNPPGPFWKAAFADSSGQHPPDACAFRRGRKKRIPYSKGQLRELEREYAANKF
190 200 210 220 230 240
250 260 270 280
pF1KB8 ITKDKRRKISAATSLSERQITIWFQNRRVKEKKVLAKVKNSATP
::::::::::::::::::::::::::::::::::::::::::::
NP_006 ITKDKRRKISAATSLSERQITIWFQNRRVKEKKVLAKVKNSATP
250 260 270 280
>>NP_059106 (OMIM: 142976,614931) homeobox protein Hox-C (330 aa)
initn: 787 init1: 351 opt: 848 Z-score: 574.7 bits: 114.4 E(85289): 2.8e-25
Smith-Waterman score: 848; 48.2% identity (72.0% similar) in 282 aa overlap (3-279:51-323)
10 20 30
pF1KB8 MEPGNYATLDGAKDIEGLLGAGGGRNLVAHSP
::. ..:: . . :. :.:. : :
NP_059 DSAAESGIGGGGGGGGGGTGGAGGGCSGASPGKAPSMDG---LGSSCPASHCRDLLPH-P
30 40 50 60 70
40 50 60 70 80 90
pF1KB8 LTSHPAAPTLMPAVNYAPLDLPGSAEPPKQCHPCPGVPQGTSPAPVPYGY-FGGGYYSCR
. ..: :: : . . :.: . : .:: : : .: .: : . ::: :::.::.::
NP_059 VLGRPPAPLGAPQ-GAVYTDIP-APEAARQCAP-PPAPPTSSSATLGYGYPFGGSYYGCR
80 90 100 110 120 130
100 110 120 130 140
pF1KB8 VSRS---SLKPCAQAATLAAYPAETPT-AGEEYPSRPTEFAFYPGYPGTYQPMASYLDVS
.:.. . :::: :: . . :.. :: ::::::.. ..:: : .:::::
NP_059 LSHNVNLQQKPCAYHPG-DKYPEPSGALPGDDLSSRAKEFAFYPSFASSYQAMPGYLDVS
140 150 160 170 180 190
150 160 170 180 190 200
pF1KB8 VVQTLGAPGEPRHDSLLPVDSYQSWALAGGWNSQMCCQGEQNPPGPFWKAAFADSSGQHP
:: ... :::::.:.::..:: :::..::.::. :. ::. . .::. : : .:
NP_059 VVPGISGHPEPRHDALIPVEGYQHWALSNGWDSQVYCSKEQSQSAHLWKSPFPDVVPLQP
200 210 220 230 240 250
210 220 230 240 250 260
pF1KB8 PDACAFRRGRKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNR
.. ..:::::::.::.: ::.:::.::::.:::::.:::.:::.:.:::::.:::::::
NP_059 -EVSSYRRGRKKRVPYTKVQLKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNR
260 270 280 290 300 310
270 280
pF1KB8 RVKEKKVLAKVKNSATP
:::::::..: :
NP_059 RVKEKKVVSKSKAPHLHST
320 330
>>NP_000513 (OMIM: 140000,142959,176305) homeobox protei (388 aa)
initn: 868 init1: 457 opt: 714 Z-score: 486.6 bits: 98.4 E(85289): 2.3e-20
Smith-Waterman score: 871; 57.3% identity (75.2% similar) in 246 aa overlap (54-282:144-388)
30 40 50 60 70 80
pF1KB8 GRNLVAHSPLTSHPAAPTLMPAVNYAPLDLPGSAEPPKQCHPCPGVPQGTS-PAPVPYGY
:..:: ::: :: .. :..: :: .::::
NP_000 PSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQSSSGPAALPYGY
120 130 140 150 160 170
90 100 110 120 130
pF1KB8 FGGGYYSC-RVSR--SSLKPCAQAATLAAYPAETP----TAG---EEYPSRPTEFAFY-P
::.::: : :.. ...: ::: :. :: : . ::: ::. :: :::::
NP_000 FGSGYYPCARMGPHPNAIKSCAQPASAAAAAAFADKYMDTAGPAAEEFSSRAKEFAFYHQ
180 190 200 210 220 230
140 150 160 170 180
pF1KB8 GYP-GTY---QPMASYLDVSVVQTLGAPGEPRHDSL-LPVDSYQSWALAGGWNSQMCCQG
:: : : ::: .:::. :: ::.::: ::. : ::..::: ::: .:::.:: :
NP_000 GYAAGPYHHHQPMPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPK
240 250 260 270 280 290
190 200 210 220 230 240
pF1KB8 EQNPPGPFWKAAFADSSGQHPPDACAFRRGRKKRIPYSKGQLRELEREYAANKFITKDKR
:: : .::... : . :: :: ..:::::::.::.: ::.:::::::.:::::::::
NP_000 EQAQPPHLWKSTLPDVVS-HPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKR
300 310 320 330 340 350
250 260 270 280
pF1KB8 RKISAATSLSERQITIWFQNRRVKEKKVLAKVKNSATP
:.:::.:.:::::.::::::::::::::. :.:...
NP_000 RRISATTNLSERQVTIWFQNRRVKEKKVINKLKTTS
360 370 380
>>NP_000514 (OMIM: 113200,113300,142989,186000,186300,19 (343 aa)
initn: 740 init1: 568 opt: 669 Z-score: 457.8 bits: 92.9 E(85289): 9.2e-19
Smith-Waterman score: 749; 47.8% identity (74.1% similar) in 247 aa overlap (57-283:101-343)
30 40 50 60 70 80
pF1KB8 LVAHSPLTSHPAAPTLMPAVNYAPLDLPGSAEPPKQCH-PCPGVPQGTSP-AP-VPYGY-
: : :.: : :.. .. : :: . :::
NP_000 ASGFAYPGTSERTGSSSSSSSSAVVAARPEAPPAKECPAPTPAAAAAAPPSAPALGYGYH
80 90 100 110 120 130
90 100 110 120
pF1KB8 FGGGYYSCRVS------RSSLKPCAQAATLAAYPAE----------TPTAGEEYPSRPTE
::.::::::.: ...:: .: .:...:.: . . ..: :.: :
NP_000 FGNGYYSCRMSHGVGLQQNALKSSPHA-SLGGFPVEKYMDVSGLASSSVPANEVPARAKE
140 150 160 170 180
130 140 150 160 170 180
pF1KB8 FAFYPGYPGTYQPMASYLDVSVVQTLGAPGEPRHDSLLPVDSYQSWALAGGWNSQMCCQG
.:: :: . :: . .:.: .:.:.:. :::::.. . ...::::.::.:::::. :
NP_000 VSFYQGYTSPYQHVPGYID--MVSTFGS-GEPRHEAYISMEGYQSWTLANGWNSQVYCTK
190 200 210 220 230 240
190 200 210 220 230 240
pF1KB8 EQNPPGPFWKAAFADSSGQHPPDACAFRRGRKKRIPYSKGQLRELEREYAANKFITKDKR
.: . :::..: . . . :: :..:::::::.::.: ::.::: ::: ::::.::::
NP_000 DQPQGSHFWKSSFPGDVALNQPDMCVYRRGRKKRVPYTKLQLKELENEYAINKFINKDKR
250 260 270 280 290 300
250 260 270 280
pF1KB8 RKISAATSLSERQITIWFQNRRVKEKKVLAKVKNSATP
:.:::::.:::::.::::::::::.::...:.:....
NP_000 RRISAATNLSERQVTIWFQNRRVKDKKIVSKLKDTVS
310 320 330 340
>>XP_011509370 (OMIM: 113200,113300,142989,186000,186300 (324 aa)
initn: 411 init1: 391 opt: 391 Z-score: 276.9 bits: 59.3 E(85289): 1.1e-08
Smith-Waterman score: 391; 71.1% identity (94.7% similar) in 76 aa overlap (208-283:249-324)
180 190 200 210 220 230
pF1KB8 WNSQMCCQGEQNPPGPFWKAAFADSSGQHPPDACAFRRGRKKRIPYSKGQLRELEREYAA
:: :..:::::::.::.: ::.::: :::
XP_011 PFALPVRTMWIPHRDNGLCGMEIGDVALNQPDMCVYRRGRKKRVPYTKLQLKELENEYAI
220 230 240 250 260 270
240 250 260 270 280
pF1KB8 NKFITKDKRRKISAATSLSERQITIWFQNRRVKEKKVLAKVKNSATP
::::.:::::.:::::.:::::.::::::::::.::...:.:....
XP_011 NKFINKDKRRRISAATNLSERQVTIWFQNRRVKDKKIVSKLKDTVS
280 290 300 310 320
>>NP_776272 (OMIM: 142975) homeobox protein Hox-C12 [Hom (282 aa)
initn: 289 init1: 233 opt: 292 Z-score: 213.0 bits: 47.3 E(85289): 4e-05
Smith-Waterman score: 292; 30.8% identity (50.4% similar) in 250 aa overlap (43-277:39-275)
20 30 40 50 60 70
pF1KB8 KDIEGLLGAGGGRNLVAHSPLTSHPAAPTLMPAVNYAPLDLPGSAEPPKQCHPCPGVPQG
.:...: : : :. .:: : ::
NP_776 PGFVGPLVNIHTGDTFYFPNFRASGAQLPGLPSLSYPRRDNVCSLSWPSA-EPCNGYPQP
10 20 30 40 50 60
80 90 100 110
pF1KB8 TSPAPV----PYGYF--------GGGYYSCRVSRSSLKPCAQAATLAAYPAET---PTAG
.:: :.: : ::: .:::... . : : ::
NP_776 YLGSPVSLNPPFGRTCELARVEDGKGYYR--------EPCAEGGGGGLKREERGRDPGAG
70 80 90 100 110
120 130 140 150 160 170
pF1KB8 EEYPSRPTEFAFYPGYPGTYQPMASYLDVSVVQTLGAPGEPRHDSLLPVDSYQSWALAGG
: : . :. :. :. . : : .: . : :: .: :.
NP_776 PGAALLPLEPSGPPALGFKYDYAAGGGGGDGGGGAGPPHDPPSCQSLESDSSSSLLNEGN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 WNSQMCCQGEQNPPGPFWKAAFADSSGQHPPDACAFRRGRKKRIPYSKGQLRELEREYAA
.. : : . :... .: .. :.:::: :::: :: ::: :. .
NP_776 KGAGAGDPGSLVSPLNPGGGLSASGAPWYPINS----RSRKKRKPYSKLQLAELEGEFLV
180 190 200 210 220 230
240 250 260 270 280
pF1KB8 NKFITKDKRRKISAATSLSERQITIWFQNRRVKEKKVLAKVKNSATP
:.:::...::..: .::..:. :::::::.:.:..: .
NP_776 NEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLREQALSFF
240 250 260 270 280
>>NP_076922 (OMIM: 142964) homeobox protein Hox-B9 [Homo (250 aa)
initn: 315 init1: 221 opt: 266 Z-score: 196.6 bits: 44.1 E(85289): 0.00033
Smith-Waterman score: 300; 29.8% identity (53.7% similar) in 272 aa overlap (15-274:3-243)
10 20 30 40 50 60
pF1KB8 MEPGNYATLDGAKDIEGLLGAGGGRNLVAHSPLTSHPAAPTLMPAVNYAPLDLPGSAEPP
: : :.. ....: :. : :. .:. .:: :: ::
NP_076 MSISGTLSSYYVDSIISHE---SEDAPPAKFPSGQYASSRQPGHAEH-
10 20 30 40
70 80 90 100 110
pF1KB8 KQCHPCPGVPQGTSPAPVPYGYFGGGYYSCRVSRSSLKPCAQAATLAAY-PAETPTAGEE
. : :. ::: ::... . :.: :... ..: : : .
NP_076 LEFPSCSFQPK----APV----FGASW-------APLSPHASGSLPSVYHPYIQPQGVPP
50 60 70 80
120 130 140 150 160 170
pF1KB8 YPSRPTEFAFYPGYPGTYQPMASYLDVSVVQTLGAPGE------PRHDSLLPVDSYQSWA
:: . . :. : : . :.. :::::: :... : ... . .
NP_076 AESRYLRTWLEPAPRGEAAPGQGQAAVKAEPLLGAPGELLKQGTPEYS--LETSAGREAV
90 100 110 120 130 140
180 190 200 210 220
pF1KB8 LAG---GWNSQMCCQGEQNPPGPFWKAAFADSSGQHPPDACAF--RRGRKKRIPYSKGQL
:.. :.... :.: .. : : :.: . : .:::: ::.: :
NP_076 LSNQRPGYGDNKICEGSEDKERP----------DQTNPSANWLHARSSRKKRCPYTKYQT
150 160 170 180 190
230 240 250 260 270 280
pF1KB8 RELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKKVLAKVKNSATP
:::.:. : ..:.:.:.... .:::::. :::::::.: ::.
NP_076 LELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQGKE
200 210 220 230 240 250
>>NP_067015 (OMIM: 142986) homeobox protein Hox-D11 [Hom (338 aa)
initn: 277 init1: 236 opt: 261 Z-score: 191.9 bits: 43.6 E(85289): 0.0006
Smith-Waterman score: 306; 31.0% identity (57.0% similar) in 277 aa overlap (4-274:79-324)
10 20 30
pF1KB8 MEPGNYATLDGAKDIEGLLGAGGGRNLVAHSPL
:. .. :... : :.::: . ...:
NP_067 SNLAPHVQPVREVAFRDYGLERAKWPYRGGGGGGSAGGGSSGGGPGGGGGGAG--GYAPY
50 60 70 80 90 100
40 50 60 70 80
pF1KB8 -TSHPAAPTLMPAVNYAPLD---LPGSAEPPKQCHPCPGVPQGTSPAPVPYGYFGGG--Y
.. :: . :.. : .. :: ... : : : ..:.: :.: :.. .
NP_067 YAAAAAAAAAAAAAEEAAMQRELLPPAGRRPDVLFKAPE-PVCAAPGP-PHGPAGAASNF
110 120 130 140 150 160
90 100 110 120 130 140
pF1KB8 YSCRVSRSSLKPCAQAATLAAYPAETPTAGEEYPSRPTEFAFYPGYPGTYQPMASYLDVS
:: :.:... : . : :. : :: . : :. : : . :. :
NP_067 YSA-VGRNGILPQGFDQFYEAAPGP-PFAGPQPPPPPA-----PPQP---EGAADKGD-P
170 180 190 200 210
150 160 170 180 190 200
pF1KB8 VVQTLGAPGEPRHDSLLPVDSYQSWALAGGWNSQMCCQGEQNPPGPFWKAAFADSSGQHP
. . :. : : . : . .. : ..: . :: .::: ......
NP_067 RTGAGGGGGSPCTKAT-PGSEPKGAAEGSGGD------GE-GPPG--------EAGAEKS
220 230 240 250
210 220 230 240 250 260
pF1KB8 PDACAFRRGRKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNR
.: : .:.:::: ::.: :.::::::. : .:.:.:: ..: .:..::. ::::::
NP_067 SSAVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR
260 270 280 290 300 310
270 280
pF1KB8 RVKEKKVLAKVKNSATP
:.::::.
NP_067 RMKEKKLNRDRLQYFTGNPLF
320 330
>>NP_067016 (OMIM: 142988) homeobox protein Hox-D12 [Hom (270 aa)
initn: 249 init1: 226 opt: 256 Z-score: 189.7 bits: 42.9 E(85289): 0.00079
Smith-Waterman score: 295; 30.6% identity (51.4% similar) in 245 aa overlap (43-277:39-263)
20 30 40 50 60 70
pF1KB8 KDIEGLLGAGGGRNLVAHSPLTSHPAAPTLMPAVNYAPLDLPGSAEPPKQCHPC-PGVPQ
.: ..: :: .: : . : : :.
NP_067 AGYVGSLLNLQSPDSFYFSNLRPNGGQLAALPPISYPRGALPWAATPAS-CAPAQPAGAT
10 20 30 40 50 60
80 90 100 110 120 130
pF1KB8 GTSPAPVPYGYFGGGYYSCRVSRSSLKPCAQAATLAAYPAETPTA-GEEYPSRPTEFAFY
. . :: :.: . . .. : :: : : : :. :: : ..
NP_067 AFGGFSQPY-LAGSGPLGLQPPTAKDGPEEQAKFYAPEAAAGPEERGRTRPSFAPESSLA
70 80 90 100 110 120
140 150 160 170 180
pF1KB8 PGYPGTYQPMASYLDV------SVVQTLGAPGEP--RHDSLLPVDSYQSWALAGGWNSQM
:. . .: : :.. ::: : . :. :.. .. . :.: :
NP_067 PAVAALKAAKYDYAGVGRATPGSTTLLQGAPCAPGFKDDTKGPLNLNMT-VQAAGVAS--
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 CCQGEQNPPGPFWKAAFADSSGQHPPDACAFRRGRKKRIPYSKGQLRELEREYAANKFIT
: . : : : :: : :.:::: ::.: :. ::: :. .:.::.
NP_067 -CLRPSLPDGLPWGAA---------PG-----RARKKRKPYTKQQIAELENEFLVNEFIN
190 200 210 220
250 260 270 280
pF1KB8 KDKRRKISAATSLSERQITIWFQNRRVKEKKVLAKVKNSATP
..::...: .::..:. :::::::.:.:.:. .
NP_067 RQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVVLREQALALY
230 240 250 260 270
>>NP_055027 (OMIM: 605559) homeobox protein Hox-C11 [Hom (304 aa)
initn: 273 init1: 238 opt: 256 Z-score: 189.1 bits: 43.0 E(85289): 0.00085
Smith-Waterman score: 290; 29.3% identity (56.2% similar) in 249 aa overlap (41-274:49-290)
20 30 40 50 60 70
pF1KB8 GAKDIEGLLGAGGGRNLVAHSPLTSHPAAPTLMPAVNYAPLDLPGSAEPPKQCHPCPGVP
...: . .. : ::. : : :
NP_055 GADFGERGSCASNLYLPSCTYYMPEFSTVSSFLPQAPSRQISYPYSAQVP----PVREVS
20 30 40 50 60 70
80 90 100 110 120
pF1KB8 QGTSPAPVPYGYFGGGYYSCRVSRSSL--KPCAQAATLAA--YPAETPTAGEEYPSRP--
: :. . ..: :: .. . : . : .:.. . : .:...:: :
NP_055 YGLEPSG--KWHHRNSYSSCYAAADELMHRECLPPSTVTEILMKNEGSYGGHHHPSAPHA
80 90 100 110 120 130
130 140 150 160 170
pF1KB8 TEFAFYPGY-PGTYQPMA--SYLDVSVVQTLGAPGEP----RHDSLLPVDSYQSWALAGG
: .:: . .. :.: ..: . :.:: . .. .. . .::.
NP_055 TPAGFYSSVNKNSVLPQAFDRFFDNAYCGGGDPPAEPPCSGKGEAKGEPEAPPASGLASR
140 150 160 170 180 190
180 190 200 210 220 230
pF1KB8 WNSQMCCQGEQNPPGPFWKAAFADSSGQHPPDACAFR--RGRKKRIPYSKGQLRELEREY
.. ..:.. .: ... : : ...: . : : :::: :::: :.::::::.
NP_055 AEAGAEAEAEEENTNPS-SSGSAHSVAKEPAKGAAPNAPRTRKKRCPYSKFQIRELEREF
200 210 220 230 240 250
240 250 260 270 280
pF1KB8 AANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKKVLAKVKNSATP
: .:.:.:: ..: .:..::. :::::::.::::.
NP_055 FFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDRLQYFSGNPLL
260 270 280 290 300
284 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 16:34:33 2016 done: Fri Nov 4 16:34:34 2016
Total Scan time: 8.470 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]