Result of FASTA (omim) for
pF1KB8926
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8926, 273 aa
1>>>pF1KB8926 273 - 273 aa - 273 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0001+/-0.000607; mu= 8.3667+/- 0.037
mean_var=261.5236+/-53.722, 0's: 0 Z-trim(114.4): 2075 B-trim: 26 in 1/49
Lambda= 0.079308
statistics sampled from 21988 (24294) to 21988 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.629), E-opt: 0.2 (0.285), width: 16
Scan time: 5.870
The best scores are: opt bits E(85289)
XP_016872105 (OMIM: 194539) PREDICTED: zinc finger ( 273) 1940 235.4 9e-62
NP_001005368 (OMIM: 194539) zinc finger protein 32 ( 273) 1940 235.4 9e-62
NP_008904 (OMIM: 194539) zinc finger protein 32 is ( 273) 1940 235.4 9e-62
NP_001311093 (OMIM: 194539) zinc finger protein 32 ( 277) 1778 216.8 3.5e-56
NP_001311094 (OMIM: 194539) zinc finger protein 32 ( 277) 1778 216.8 3.5e-56
NP_001311096 (OMIM: 194539) zinc finger protein 32 ( 248) 1763 215.0 1.1e-55
NP_001311097 (OMIM: 194539) zinc finger protein 32 ( 248) 1763 215.0 1.1e-55
NP_001311095 (OMIM: 194539) zinc finger protein 32 ( 248) 1763 215.0 1.1e-55
NP_001166303 (OMIM: 612429) zinc finger protein 30 ( 568) 882 114.8 3.7e-25
NP_443092 (OMIM: 612429) zinc finger protein 300 i ( 604) 882 114.8 3.9e-25
XP_011536004 (OMIM: 612429) PREDICTED: zinc finger ( 609) 882 114.8 3.9e-25
NP_001166302 (OMIM: 612429) zinc finger protein 30 ( 620) 882 114.8 3.9e-25
NP_001269131 (OMIM: 300819) zinc finger protein 63 ( 533) 859 112.1 2.2e-24
NP_001177184 (OMIM: 300819) zinc finger protein 63 ( 643) 859 112.2 2.5e-24
NP_001269130 (OMIM: 300819) zinc finger protein 63 ( 657) 859 112.2 2.5e-24
NP_001032824 (OMIM: 300819) zinc finger protein 63 ( 657) 859 112.2 2.5e-24
XP_011513176 (OMIM: 602240) PREDICTED: zinc finger ( 391) 855 111.4 2.6e-24
XP_011513175 (OMIM: 602240) PREDICTED: zinc finger ( 391) 855 111.4 2.6e-24
NP_001265051 (OMIM: 602240) zinc finger protein wi ( 391) 855 111.4 2.6e-24
NP_001265050 (OMIM: 602240) zinc finger protein wi ( 391) 855 111.4 2.6e-24
XP_016882745 (OMIM: 606740) PREDICTED: zinc finger ( 349) 854 111.3 2.6e-24
XP_016882742 (OMIM: 606740) PREDICTED: zinc finger ( 349) 854 111.3 2.6e-24
XP_016882740 (OMIM: 606740) PREDICTED: zinc finger ( 349) 854 111.3 2.6e-24
XP_016882739 (OMIM: 606740) PREDICTED: zinc finger ( 349) 854 111.3 2.6e-24
XP_016882743 (OMIM: 606740) PREDICTED: zinc finger ( 349) 854 111.3 2.6e-24
XP_016882741 (OMIM: 606740) PREDICTED: zinc finger ( 349) 854 111.3 2.6e-24
NP_001275689 (OMIM: 606740) zinc finger protein 18 ( 349) 854 111.3 2.6e-24
NP_001275691 (OMIM: 606740) zinc finger protein 18 ( 349) 854 111.3 2.6e-24
NP_001275690 (OMIM: 606740) zinc finger protein 18 ( 349) 854 111.3 2.6e-24
XP_016882744 (OMIM: 606740) PREDICTED: zinc finger ( 349) 854 111.3 2.6e-24
XP_005259333 (OMIM: 613905) PREDICTED: zinc finger ( 792) 858 112.2 3e-24
NP_079303 (OMIM: 613905) zinc finger protein 606 [ ( 792) 858 112.2 3e-24
NP_001265048 (OMIM: 602240) zinc finger protein wi ( 578) 855 111.7 3.2e-24
XP_011513172 (OMIM: 602240) PREDICTED: zinc finger ( 578) 855 111.7 3.2e-24
XP_016866755 (OMIM: 602240) PREDICTED: zinc finger ( 578) 855 111.7 3.2e-24
NP_006289 (OMIM: 602240) zinc finger protein with ( 578) 855 111.7 3.2e-24
NP_001252529 (OMIM: 601856) zinc finger protein 21 ( 503) 853 111.4 3.5e-24
NP_001252528 (OMIM: 601856) zinc finger protein 21 ( 555) 853 111.4 3.7e-24
NP_942152 (OMIM: 601856) zinc finger protein 211 i ( 564) 853 111.4 3.7e-24
NP_001278562 (OMIM: 606740) zinc finger protein 18 ( 665) 854 111.7 3.8e-24
NP_001265438 (OMIM: 606740) zinc finger protein 18 ( 665) 854 111.7 3.8e-24
NP_006376 (OMIM: 601856) zinc finger protein 211 i ( 577) 853 111.5 3.8e-24
NP_001265437 (OMIM: 606740) zinc finger protein 18 ( 667) 854 111.7 3.8e-24
NP_001275688 (OMIM: 606740) zinc finger protein 18 ( 691) 854 111.7 3.8e-24
NP_037388 (OMIM: 606740) zinc finger protein 180 i ( 692) 854 111.7 3.8e-24
NP_001252527 (OMIM: 601856) zinc finger protein 21 ( 616) 853 111.5 3.9e-24
NP_001309235 (OMIM: 601856) zinc finger protein 21 ( 627) 853 111.5 3.9e-24
NP_001252526 (OMIM: 601856) zinc finger protein 21 ( 629) 853 111.5 4e-24
XP_011525582 (OMIM: 606740) PREDICTED: zinc finger ( 734) 854 111.7 4e-24
NP_001007089 (OMIM: 314993) zinc finger protein 18 ( 620) 852 111.4 4.2e-24
>>XP_016872105 (OMIM: 194539) PREDICTED: zinc finger pro (273 aa)
initn: 1940 init1: 1940 opt: 1940 Z-score: 1230.0 bits: 235.4 E(85289): 9e-62
Smith-Waterman score: 1940; 100.0% identity (100.0% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB8 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHHKYDHSEATGSSSWDIQNSFRREKLEQKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHHKYDHSEATGSSSWDIQNSFRREKLEQKSP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 DSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHT
190 200 210 220 230 240
250 260 270
pF1KB8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
:::::::::::::::::::::::::::::::::
XP_016 GETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
250 260 270
>>NP_001005368 (OMIM: 194539) zinc finger protein 32 iso (273 aa)
initn: 1940 init1: 1940 opt: 1940 Z-score: 1230.0 bits: 235.4 E(85289): 9e-62
Smith-Waterman score: 1940; 100.0% identity (100.0% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB8 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHHKYDHSEATGSSSWDIQNSFRREKLEQKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHHKYDHSEATGSSSWDIQNSFRREKLEQKSP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 DSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHT
190 200 210 220 230 240
250 260 270
pF1KB8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
:::::::::::::::::::::::::::::::::
NP_001 GETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
250 260 270
>>NP_008904 (OMIM: 194539) zinc finger protein 32 isofor (273 aa)
initn: 1940 init1: 1940 opt: 1940 Z-score: 1230.0 bits: 235.4 E(85289): 9e-62
Smith-Waterman score: 1940; 100.0% identity (100.0% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB8 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHHKYDHSEATGSSSWDIQNSFRREKLEQKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHHKYDHSEATGSSSWDIQNSFRREKLEQKSP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 DSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 DSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 VTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 RVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHT
190 200 210 220 230 240
250 260 270
pF1KB8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
:::::::::::::::::::::::::::::::::
NP_008 GETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
250 260 270
>>NP_001311093 (OMIM: 194539) zinc finger protein 32 iso (277 aa)
initn: 1778 init1: 1778 opt: 1778 Z-score: 1129.7 bits: 216.8 E(85289): 3.5e-56
Smith-Waterman score: 1778; 99.6% identity (100.0% similar) in 251 aa overlap (23-273:27-277)
10 20 30 40 50
pF1KB8 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHHKYDHSEATGSSSWDIQNSFRREKLE
:.::::::::::::::::::::::::::::::::
NP_001 MRSAHRYSVSLFSALVGSLRKQRRPCFDVMTEAHHKYDHSEATGSSSWDIQNSFRREKLE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 QKSPDSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKSPDSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 KGNLVTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGNLVTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 AVHRRVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVHRRVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHG
190 200 210 220 230 240
240 250 260 270
pF1KB8 KIHTGETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
:::::::::::::::::::::::::::::::::::::
NP_001 KIHTGETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
250 260 270
>>NP_001311094 (OMIM: 194539) zinc finger protein 32 iso (277 aa)
initn: 1778 init1: 1778 opt: 1778 Z-score: 1129.7 bits: 216.8 E(85289): 3.5e-56
Smith-Waterman score: 1778; 99.6% identity (100.0% similar) in 251 aa overlap (23-273:27-277)
10 20 30 40 50
pF1KB8 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHHKYDHSEATGSSSWDIQNSFRREKLE
:.::::::::::::::::::::::::::::::::
NP_001 MRSAHRYSVSLFSALVGSLRKQRRPCFDVMTEAHHKYDHSEATGSSSWDIQNSFRREKLE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 QKSPDSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKSPDSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 KGNLVTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGNLVTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB8 AVHRRVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVHRRVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHG
190 200 210 220 230 240
240 250 260 270
pF1KB8 KIHTGETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
:::::::::::::::::::::::::::::::::::::
NP_001 KIHTGETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
250 260 270
>>NP_001311096 (OMIM: 194539) zinc finger protein 32 iso (248 aa)
initn: 1763 init1: 1763 opt: 1763 Z-score: 1120.9 bits: 215.0 E(85289): 1.1e-55
Smith-Waterman score: 1763; 100.0% identity (100.0% similar) in 248 aa overlap (26-273:1-248)
10 20 30 40 50 60
pF1KB8 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHHKYDHSEATGSSSWDIQNSFRREKLEQKSP
:::::::::::::::::::::::::::::::::::
NP_001 MTEAHHKYDHSEATGSSSWDIQNSFRREKLEQKSP
10 20 30
70 80 90 100 110 120
pF1KB8 DSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNL
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 VTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHR
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 RVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHT
160 170 180 190 200 210
250 260 270
pF1KB8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
:::::::::::::::::::::::::::::::::
NP_001 GETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
220 230 240
>>NP_001311097 (OMIM: 194539) zinc finger protein 32 iso (248 aa)
initn: 1763 init1: 1763 opt: 1763 Z-score: 1120.9 bits: 215.0 E(85289): 1.1e-55
Smith-Waterman score: 1763; 100.0% identity (100.0% similar) in 248 aa overlap (26-273:1-248)
10 20 30 40 50 60
pF1KB8 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHHKYDHSEATGSSSWDIQNSFRREKLEQKSP
:::::::::::::::::::::::::::::::::::
NP_001 MTEAHHKYDHSEATGSSSWDIQNSFRREKLEQKSP
10 20 30
70 80 90 100 110 120
pF1KB8 DSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNL
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 VTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHR
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 RVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHT
160 170 180 190 200 210
250 260 270
pF1KB8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
:::::::::::::::::::::::::::::::::
NP_001 GETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
220 230 240
>>NP_001311095 (OMIM: 194539) zinc finger protein 32 iso (248 aa)
initn: 1763 init1: 1763 opt: 1763 Z-score: 1120.9 bits: 215.0 E(85289): 1.1e-55
Smith-Waterman score: 1763; 100.0% identity (100.0% similar) in 248 aa overlap (26-273:1-248)
10 20 30 40 50 60
pF1KB8 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHHKYDHSEATGSSSWDIQNSFRREKLEQKSP
:::::::::::::::::::::::::::::::::::
NP_001 MTEAHHKYDHSEATGSSSWDIQNSFRREKLEQKSP
10 20 30
70 80 90 100 110 120
pF1KB8 DSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNL
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 VTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHR
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 RVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHT
160 170 180 190 200 210
250 260 270
pF1KB8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
:::::::::::::::::::::::::::::::::
NP_001 GETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
220 230 240
>>NP_001166303 (OMIM: 612429) zinc finger protein 300 is (568 aa)
initn: 1675 init1: 882 opt: 882 Z-score: 572.6 bits: 114.8 E(85289): 3.7e-25
Smith-Waterman score: 882; 56.2% identity (82.8% similar) in 192 aa overlap (74-265:286-477)
50 60 70 80 90 100
pF1KB8 WDIQNSFRREKLEQKSPDSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQK
.. :.:.::::.: ::.:: .:.:.:::.:
NP_001 TGKKPYDCGACGKAFSEKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEK
260 270 280 290 300 310
110 120 130 140 150 160
pF1KB8 PFECTHCGKSFRAKGNLVTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYEC
:.::..:::.: :. :. :::::::::::.:.::::.:::...: .:.: :::.:::::
NP_001 PYECSECGKAFSQKSPLIIHQRIHTGEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYEC
320 330 340 350 360 370
170 180 190 200 210 220
pF1KB8 AICQRSFRNQSNLAVHRRVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCR
. : ..: ..:.: .:.:.:.:::::.: :: .:::.: ::.: :::: ::: ::.:
NP_001 TECGKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKPYECTECG
380 390 400 410 420 430
230 240 250 260 270
pF1KB8 KSFHTRGNCILHGKIHTGETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
:.: ... :.: . :::: :: :..:::.: :.. : :::
NP_001 KTFSRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFS
440 450 460 470 480 490
NP_001 QKSHLPGHQRIHTGEKPYICAECGKAFSQKSDLVLHQRIHTGERPYQCAICGKAFIQKSQ
500 510 520 530 540 550
>--
initn: 820 init1: 421 opt: 421 Z-score: 287.5 bits: 62.0 E(85289): 2.8e-09
Smith-Waterman score: 421; 59.8% identity (89.7% similar) in 87 aa overlap (98-184:478-564)
70 80 90 100 110 120
pF1KB8 DSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNLVTHQRIH
::::.::. ::.:::.: :..: :::::
NP_001 QRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKSHLPGHQRIH
450 460 470 480 490 500
130 140 150 160 170 180
pF1KB8 TGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHRRVHSGEK
:::::: : ::::.:::...:..:.:.:::..::.:::: ..: ..:.:.::.:.:.
NP_001 TGEKPYICAECGKAFSQKSDLVLHQRIHTGERPYQCAICGKAFIQKSQLTVHQRIHTVVK
510 520 530 540 550 560
190 200 210 220 230 240
pF1KB8 PYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHTGETPYLC
NP_001 S
>--
initn: 420 init1: 325 opt: 330 Z-score: 231.2 bits: 51.6 E(85289): 3.9e-06
Smith-Waterman score: 334; 32.0% identity (61.6% similar) in 172 aa overlap (14-185:132-285)
10 20 30 40
pF1KB8 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHHKYDHSEATGSSS
:. :. .. . :::: . . . .
NP_001 LENQDKLFRQVTFVNSKTVTEASGHKYNPLGKIFQECIETDISIQRFHKYDAFKKNLKPN
110 120 130 140 150 160
50 60 70 80 90 100
pF1KB8 WDIQNSFRREKLEQKSPDSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQK
:. . .. .. .:.::. : : ::: :. . :.::.:
NP_001 IDLPSCYKSNS--RKKPDQ------SFG----------GGKSSSQSEPNSNLEKIHNGVI
170 180 190 200
110 120 130 140 150 160
pF1KB8 PFECTHCGKSFRAKGNLVTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYEC
::. ..::. :: .:. .: ..: :: : :::.:.....: ::.:.:::.:::.:
NP_001 PFDDNQCGNVFRNTQSLIQYQNVETKEKSCVCVTCGKAFAKKSQLIVHQRIHTGKKPYDC
210 220 230 240 250 260
170 180 190 200 210 220
pF1KB8 AICQRSFRNQSNLAVHRRVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCR
. : ..: .. .:.::.:.:.:
NP_001 GACGKAFSEKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEKPYECSECG
270 280 290 300 310 320
>>NP_443092 (OMIM: 612429) zinc finger protein 300 isofo (604 aa)
initn: 1675 init1: 882 opt: 882 Z-score: 572.3 bits: 114.8 E(85289): 3.9e-25
Smith-Waterman score: 882; 56.2% identity (82.8% similar) in 192 aa overlap (74-265:322-513)
50 60 70 80 90 100
pF1KB8 WDIQNSFRREKLEQKSPDSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQK
.. :.:.::::.: ::.:: .:.:.:::.:
NP_443 TGKKPYDCGACGKAFSEKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEK
300 310 320 330 340 350
110 120 130 140 150 160
pF1KB8 PFECTHCGKSFRAKGNLVTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYEC
:.::..:::.: :. :. :::::::::::.:.::::.:::...: .:.: :::.:::::
NP_443 PYECSECGKAFSQKSPLIIHQRIHTGEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYEC
360 370 380 390 400 410
170 180 190 200 210 220
pF1KB8 AICQRSFRNQSNLAVHRRVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCR
. : ..: ..:.: .:.:.:.:::::.: :: .:::.: ::.: :::: ::: ::.:
NP_443 TECGKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKPYECTECG
420 430 440 450 460 470
230 240 250 260 270
pF1KB8 KSFHTRGNCILHGKIHTGETPYLCGQCGKSFTQRGSLAVHQRSCSQRLTL
:.: ... :.: . :::: :: :..:::.: :.. : :::
NP_443 KTFSRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFS
480 490 500 510 520 530
NP_443 QKSHLPGHQRIHTGEKPYICAECGKAFSQKSDLVLHQRIHTGERPYQCAICGKAFIQKSQ
540 550 560 570 580 590
>--
initn: 820 init1: 421 opt: 421 Z-score: 287.2 bits: 62.1 E(85289): 2.9e-09
Smith-Waterman score: 421; 59.8% identity (89.7% similar) in 87 aa overlap (98-184:514-600)
70 80 90 100 110 120
pF1KB8 DSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQKPFECTHCGKSFRAKGNLVTHQRIH
::::.::. ::.:::.: :..: :::::
NP_443 QRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKSHLPGHQRIH
490 500 510 520 530 540
130 140 150 160 170 180
pF1KB8 TGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHRRVHSGEK
:::::: : ::::.:::...:..:.:.:::..::.:::: ..: ..:.:.::.:.:.
NP_443 TGEKPYICAECGKAFSQKSDLVLHQRIHTGERPYQCAICGKAFIQKSQLTVHQRIHTVVK
550 560 570 580 590 600
190 200 210 220 230 240
pF1KB8 PYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCRKSFHTRGNCILHGKIHTGETPYLC
NP_443 S
>--
initn: 420 init1: 325 opt: 330 Z-score: 231.0 bits: 51.6 E(85289): 4e-06
Smith-Waterman score: 334; 32.0% identity (61.6% similar) in 172 aa overlap (14-185:168-321)
10 20 30 40
pF1KB8 MFGFPTATLLDCHGRYAQNVAFFNVMTEAHHKYDHSEATGSSS
:. :. .. . :::: . . . .
NP_443 LENQDKLFRQVTFVNSKTVTEASGHKYNPLGKIFQECIETDISIQRFHKYDAFKKNLKPN
140 150 160 170 180 190
50 60 70 80 90 100
pF1KB8 WDIQNSFRREKLEQKSPDSKTLQEDSPGVRQRVYECQECGKSFRQKGSLTLHERIHTGQK
:. . .. .. .:.::. : : ::: :. . :.::.:
NP_443 IDLPSCYKSNS--RKKPDQ------SFG----------GGKSSSQSEPNSNLEKIHNGVI
200 210 220 230
110 120 130 140 150 160
pF1KB8 PFECTHCGKSFRAKGNLVTHQRIHTGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYEC
::. ..::. :: .:. .: ..: :: : :::.:.....: ::.:.:::.:::.:
NP_443 PFDDNQCGNVFRNTQSLIQYQNVETKEKSCVCVTCGKAFAKKSQLIVHQRIHTGKKPYDC
240 250 260 270 280 290
170 180 190 200 210 220
pF1KB8 AICQRSFRNQSNLAVHRRVHSGEKPYRCDQCGKAFSQKGSLIVHIRVHTGLKPYACTQCR
. : ..: .. .:.::.:.:.:
NP_443 GACGKAFSEKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEKPYECSECG
300 310 320 330 340 350
273 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 16:32:23 2016 done: Fri Nov 4 16:32:24 2016
Total Scan time: 5.870 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]