Result of FASTA (ccds) for
pF1KB8873
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8873, 162 aa
1>>>pF1KB8873 162 - 162 aa - 162 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9053+/-0.000802; mu= 6.6521+/- 0.049
mean_var=133.7490+/-26.087, 0's: 0 Z-trim(112.8): 20 B-trim: 101 in 1/52
Lambda= 0.110899
statistics sampled from 13511 (13526) to 13511 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.769), E-opt: 0.2 (0.415), width: 16
Scan time: 2.070
The best scores are: opt bits E(32554)
CCDS11793.1 MAFG gene_id:4097|Hs108|chr17 ( 162) 998 169.8 6.7e-43
CCDS5325.1 MAFK gene_id:7975|Hs108|chr7 ( 156) 675 118.1 2.3e-27
CCDS13968.1 MAFF gene_id:23764|Hs108|chr22 ( 164) 547 97.6 3.6e-21
CCDS54528.1 MAFF gene_id:23764|Hs108|chr22 ( 135) 469 85.1 1.8e-17
CCDS13311.1 MAFB gene_id:9935|Hs108|chr20 ( 323) 368 69.2 2.5e-12
CCDS42198.1 MAF gene_id:4094|Hs108|chr16 ( 373) 348 66.1 2.6e-11
CCDS10928.1 MAF gene_id:4094|Hs108|chr16 ( 403) 348 66.1 2.7e-11
CCDS34955.1 MAFA gene_id:389692|Hs108|chr8 ( 353) 344 65.4 3.8e-11
>>CCDS11793.1 MAFG gene_id:4097|Hs108|chr17 (162 aa)
initn: 998 init1: 998 opt: 998 Z-score: 883.7 bits: 169.8 E(32554): 6.7e-43
Smith-Waterman score: 998; 100.0% identity (100.0% similar) in 162 aa overlap (1-162:1-162)
10 20 30 40 50 60
pF1KB8 MTTPNKGNKALKVKREPGENGTSLTDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MTTPNKGNKALKVKREPGENGTSLTDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEALQTFART
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 NRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEALQTFART
70 80 90 100 110 120
130 140 150 160
pF1KB8 VARSPVAPARGPLAAGLGPLVPGKVAATSVITIVKSKTDARS
::::::::::::::::::::::::::::::::::::::::::
CCDS11 VARSPVAPARGPLAAGLGPLVPGKVAATSVITIVKSKTDARS
130 140 150 160
>>CCDS5325.1 MAFK gene_id:7975|Hs108|chr7 (156 aa)
initn: 675 init1: 675 opt: 675 Z-score: 604.6 bits: 118.1 E(32554): 2.3e-27
Smith-Waterman score: 694; 75.0% identity (86.5% similar) in 156 aa overlap (1-156:1-142)
10 20 30 40 50 60
pF1KB8 MTTPNKGNKALKVKREPGENGTSLTDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLK
::: : :::::::.: :::. :.:.:::.:::::::::::::.:::...:::::::::
CCDS53 MTTNPKPNKALKVKKEAGENAPVLSDDELVSMSVRELNQHLRGLTKEEVTRLKQRRRTLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEALQTFART
:::::::::.::::::::::.:..:::::::::: ::.::.:::::::::::::::::::
CCDS53 NRGYAASCRIKRVTQKEELERQRVELQQEVEKLARENSSMRLELDALRSKYEALQTFART
70 80 90 100 110 120
130 140 150 160
pF1KB8 VARSPVAPARGPLAAGLGPLVPGKVAATSVITIVKSKTDARS
:::.::::. :::.:::::::::
CCDS53 VARGPVAPS--------------KVATTSVITIVKSTELSSTSVPFSAAS
130 140 150
>>CCDS13968.1 MAFF gene_id:23764|Hs108|chr22 (164 aa)
initn: 568 init1: 532 opt: 547 Z-score: 493.6 bits: 97.6 E(32554): 3.6e-21
Smith-Waterman score: 564; 65.4% identity (80.1% similar) in 156 aa overlap (1-156:1-142)
10 20 30 40 50 60
pF1KB8 MTTPNKGNKALKVKREPGENGTSLTDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLK
:.. ..::::.::: .:: :.:: :. .::::::.:::::: ::...:::::::::
CCDS13 MSVDPLSSKALKIKRELSENTPHLSDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 NRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEALQTFART
::::::::::::: :::::.:::.::..::.::: :::.:.:::::::.: :::: :::.
CCDS13 NRGYAASCRVKRVCQKEELQKQKSELEREVDKLARENAAMRLELDALRGKCEALQGFARS
70 80 90 100 110 120
130 140 150 160
pF1KB8 VARSPVAPARGPLAAGLGPLVPGKVAATSVITIVKSKTDARS
: : :::: : : :: .::::::::
CCDS13 V-----AAARGP--ATL-------VAPASVITIVKSTPGSGSGPAHGPDPAHGPASCS
130 140 150 160
>>CCDS54528.1 MAFF gene_id:23764|Hs108|chr22 (135 aa)
initn: 493 init1: 457 opt: 469 Z-score: 427.3 bits: 85.1 E(32554): 1.8e-17
Smith-Waterman score: 486; 70.4% identity (82.4% similar) in 125 aa overlap (32-156:3-113)
10 20 30 40 50 60
pF1KB8 TTPNKGNKALKVKREPGENGTSLTDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLKN
.::::::.:::::: ::...::::::::::
CCDS54 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKN
10 20 30
70 80 90 100 110 120
pF1KB8 RGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEALQTFARTV
:::::::::::: :::::.:::.::..::.::: :::.:.:::::::.: :::: :::.:
CCDS54 RGYAASCRVKRVCQKEELQKQKSELEREVDKLARENAAMRLELDALRGKCEALQGFARSV
40 50 60 70 80 90
130 140 150 160
pF1KB8 ARSPVAPARGPLAAGLGPLVPGKVAATSVITIVKSKTDARS
: :::: : : :: .::::::::
CCDS54 A-----AARGP--ATL-------VAPASVITIVKSTPGSGSGPAHGPDPAHGPASCS
100 110 120 130
>>CCDS13311.1 MAFB gene_id:9935|Hs108|chr20 (323 aa)
initn: 362 init1: 330 opt: 368 Z-score: 334.8 bits: 69.2 E(32554): 2.5e-12
Smith-Waterman score: 368; 47.7% identity (72.7% similar) in 132 aa overlap (4-128:188-319)
10 20 30
pF1KB8 MTTPNKGNKALKVKREPGENGT---SLTDEELV
:. : .: : ::. ..:..::
CCDS13 HAHPHHHHHHQASPPPSSAASPAQQLPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLV
160 170 180 190 200 210
40 50 60 70 80 90
pF1KB8 TMSVRELNQHLRGLSKEEIVQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEV
.:::::::.::::..:.:...:::.:::::::::: ::: ::: ::..::..:..: :.:
CCDS13 SMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQV
220 230 240 250 260 270
100 110 120 130 140
pF1KB8 EKLASENASMKLELDALRSKYEALQT--F--ARTVARSPVAPARGPLAAGLGPLVPGKVA
:.: .: . . : :: . : : : . : : ... :: .:
CCDS13 EQLKQEVSRLARERDAYKVKCEKLANSGFREAGSTSDSPSSPEFFL
280 290 300 310 320
150 160
pF1KB8 ATSVITIVKSKTDARS
>>CCDS42198.1 MAF gene_id:4094|Hs108|chr16 (373 aa)
initn: 382 init1: 345 opt: 348 Z-score: 316.6 bits: 66.1 E(32554): 2.6e-11
Smith-Waterman score: 348; 59.3% identity (83.5% similar) in 91 aa overlap (24-114:261-351)
10 20 30 40 50
pF1KB8 MTTPNKGNKALKVKREPGENGTSLTDEELVTMSVRELNQHLRGLSKEEIVQLK
..::.::::::::::..:::.::::...::
CCDS42 GGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLK
240 250 260 270 280 290
60 70 80 90 100 110
pF1KB8 QRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEA
:.:::::::::: ::: ::: :.. ::..: .: :.:..: .: . . : :: . :::
CCDS42 QKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEK
300 310 320 330 340 350
120 130 140 150 160
pF1KB8 LQTFARTVARSPVAPARGPLAAGLGPLVPGKVAATSVITIVKSKTDARS
:
CCDS42 LVSSGFRENGSSSDNPSSPEFFM
360 370
>>CCDS10928.1 MAF gene_id:4094|Hs108|chr16 (403 aa)
initn: 382 init1: 345 opt: 348 Z-score: 316.2 bits: 66.1 E(32554): 2.7e-11
Smith-Waterman score: 348; 59.3% identity (83.5% similar) in 91 aa overlap (24-114:261-351)
10 20 30 40 50
pF1KB8 MTTPNKGNKALKVKREPGENGTSLTDEELVTMSVRELNQHLRGLSKEEIVQLK
..::.::::::::::..:::.::::...::
CCDS10 GGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLK
240 250 260 270 280 290
60 70 80 90 100 110
pF1KB8 QRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEA
:.:::::::::: ::: ::: :.. ::..: .: :.:..: .: . . : :: . :::
CCDS10 QKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEK
300 310 320 330 340 350
120 130 140 150 160
pF1KB8 LQTFARTVARSPVAPARGPLAAGLGPLVPGKVAATSVITIVKSKTDARS
:
CCDS10 LVSSGFRENGSSSDNPSSPEFFITEPTRKLEPSVGYATFWKPQHRVLTSVFTK
360 370 380 390 400
>>CCDS34955.1 MAFA gene_id:389692|Hs108|chr8 (353 aa)
initn: 360 init1: 340 opt: 344 Z-score: 313.5 bits: 65.4 E(32554): 3.8e-11
Smith-Waterman score: 344; 48.7% identity (71.4% similar) in 119 aa overlap (24-135:227-345)
10 20 30 40 50
pF1KB8 MTTPNKGNKALKVKREPGENGTSLTDEELVTMSVRELNQHLRGLSKEEIVQLK
..:..::.:::::::..:::.::::...::
CCDS34 AAHHHHHHHHHHGGAGHGGGAGHHVRLEERFSDDQLVSMSVRELNRQLRGFSKEEVIRLK
200 210 220 230 240 250
60 70 80 90 100 110
pF1KB8 QRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEA
:.:::::::::: ::: ::: :.. ::..: .::..::.: : . . : : . :::
CCDS34 QKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQLKLEVGRLAKERDLYKEKYEK
260 270 280 290 300 310
120 130 140 150 160
pF1KB8 L-------QTFARTVARSPVAPARGPLAAGLGPLVPGKVAATSVITIVKSKTDARS
: .. . : : : :: .:
CCDS34 LAGRGGPGSAGGAGFPREPSPPQAGPGGAKGTADFFL
320 330 340 350
162 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 16:16:16 2016 done: Fri Nov 4 16:16:17 2016
Total Scan time: 2.070 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]