Result of FASTA (omim) for
pF1KB8855
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8855, 87 aa
1>>>pF1KB8855 87 - 87 aa - 87 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7769+/-0.000264; mu= 6.3059+/- 0.017
mean_var=65.2941+/-12.871, 0's: 0 Z-trim(119.4): 27 B-trim: 73 in 1/51
Lambda= 0.158722
statistics sampled from 33270 (33297) to 33270 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.767), E-opt: 0.2 (0.39), width: 16
Scan time: 4.360
The best scores are: opt bits E(85289)
XP_011534235 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 501 122.4 8.7e-29
NP_001257323 (OMIM: 606914) cAMP-dependent protein ( 85) 501 122.4 8.7e-29
XP_011534236 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 501 122.4 8.7e-29
XP_011534233 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 501 122.4 8.7e-29
XP_011534232 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 501 122.4 8.7e-29
NP_001257324 (OMIM: 606914) cAMP-dependent protein ( 85) 501 122.4 8.7e-29
XP_011534234 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 501 122.4 8.7e-29
XP_011534238 (OMIM: 606914) PREDICTED: cAMP-depend ( 78) 483 118.3 1.4e-27
XP_011534237 (OMIM: 606914) PREDICTED: cAMP-depend ( 78) 483 118.3 1.4e-27
XP_011534239 (OMIM: 606914) PREDICTED: cAMP-depend ( 78) 483 118.3 1.4e-27
NP_115860 (OMIM: 606914) cAMP-dependent protein ki ( 78) 483 118.3 1.4e-27
NP_861460 (OMIM: 606914) cAMP-dependent protein ki ( 78) 483 118.3 1.4e-27
NP_861459 (OMIM: 606914) cAMP-dependent protein ki ( 78) 483 118.3 1.4e-27
NP_001257322 (OMIM: 606914) cAMP-dependent protein ( 78) 483 118.3 1.4e-27
NP_862822 (OMIM: 606059) cAMP-dependent protein ki ( 76) 169 46.4 6e-06
XP_016869109 (OMIM: 606059) PREDICTED: cAMP-depend ( 76) 169 46.4 6e-06
XP_016869111 (OMIM: 606059) PREDICTED: cAMP-depend ( 76) 169 46.4 6e-06
XP_016869110 (OMIM: 606059) PREDICTED: cAMP-depend ( 76) 169 46.4 6e-06
NP_006814 (OMIM: 606059) cAMP-dependent protein ki ( 76) 169 46.4 6e-06
>>XP_011534235 (OMIM: 606914) PREDICTED: cAMP-dependent (85 aa)
initn: 501 init1: 501 opt: 501 Z-score: 637.8 bits: 122.4 E(85289): 8.7e-29
Smith-Waterman score: 501; 100.0% identity (100.0% similar) in 81 aa overlap (7-87:5-85)
10 20 30 40 50 60
pF1KB8 MHILFVDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSHQDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
10 20 30 40 50
70 80
pF1KB8 LSVKEDAKEKDEKTTQDQLEKPQNEEK
:::::::::::::::::::::::::::
XP_011 LSVKEDAKEKDEKTTQDQLEKPQNEEK
60 70 80
>>NP_001257323 (OMIM: 606914) cAMP-dependent protein kin (85 aa)
initn: 501 init1: 501 opt: 501 Z-score: 637.8 bits: 122.4 E(85289): 8.7e-29
Smith-Waterman score: 501; 100.0% identity (100.0% similar) in 81 aa overlap (7-87:5-85)
10 20 30 40 50 60
pF1KB8 MHILFVDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSHQDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
10 20 30 40 50
70 80
pF1KB8 LSVKEDAKEKDEKTTQDQLEKPQNEEK
:::::::::::::::::::::::::::
NP_001 LSVKEDAKEKDEKTTQDQLEKPQNEEK
60 70 80
>>XP_011534236 (OMIM: 606914) PREDICTED: cAMP-dependent (85 aa)
initn: 501 init1: 501 opt: 501 Z-score: 637.8 bits: 122.4 E(85289): 8.7e-29
Smith-Waterman score: 501; 100.0% identity (100.0% similar) in 81 aa overlap (7-87:5-85)
10 20 30 40 50 60
pF1KB8 MHILFVDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSHQDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
10 20 30 40 50
70 80
pF1KB8 LSVKEDAKEKDEKTTQDQLEKPQNEEK
:::::::::::::::::::::::::::
XP_011 LSVKEDAKEKDEKTTQDQLEKPQNEEK
60 70 80
>>XP_011534233 (OMIM: 606914) PREDICTED: cAMP-dependent (85 aa)
initn: 501 init1: 501 opt: 501 Z-score: 637.8 bits: 122.4 E(85289): 8.7e-29
Smith-Waterman score: 501; 100.0% identity (100.0% similar) in 81 aa overlap (7-87:5-85)
10 20 30 40 50 60
pF1KB8 MHILFVDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSHQDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
10 20 30 40 50
70 80
pF1KB8 LSVKEDAKEKDEKTTQDQLEKPQNEEK
:::::::::::::::::::::::::::
XP_011 LSVKEDAKEKDEKTTQDQLEKPQNEEK
60 70 80
>>XP_011534232 (OMIM: 606914) PREDICTED: cAMP-dependent (85 aa)
initn: 501 init1: 501 opt: 501 Z-score: 637.8 bits: 122.4 E(85289): 8.7e-29
Smith-Waterman score: 501; 100.0% identity (100.0% similar) in 81 aa overlap (7-87:5-85)
10 20 30 40 50 60
pF1KB8 MHILFVDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSHQDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
10 20 30 40 50
70 80
pF1KB8 LSVKEDAKEKDEKTTQDQLEKPQNEEK
:::::::::::::::::::::::::::
XP_011 LSVKEDAKEKDEKTTQDQLEKPQNEEK
60 70 80
>>NP_001257324 (OMIM: 606914) cAMP-dependent protein kin (85 aa)
initn: 501 init1: 501 opt: 501 Z-score: 637.8 bits: 122.4 E(85289): 8.7e-29
Smith-Waterman score: 501; 100.0% identity (100.0% similar) in 81 aa overlap (7-87:5-85)
10 20 30 40 50 60
pF1KB8 MHILFVDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSHQDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
10 20 30 40 50
70 80
pF1KB8 LSVKEDAKEKDEKTTQDQLEKPQNEEK
:::::::::::::::::::::::::::
NP_001 LSVKEDAKEKDEKTTQDQLEKPQNEEK
60 70 80
>>XP_011534234 (OMIM: 606914) PREDICTED: cAMP-dependent (85 aa)
initn: 501 init1: 501 opt: 501 Z-score: 637.8 bits: 122.4 E(85289): 8.7e-29
Smith-Waterman score: 501; 100.0% identity (100.0% similar) in 81 aa overlap (7-87:5-85)
10 20 30 40 50 60
pF1KB8 MHILFVDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSHQDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
10 20 30 40 50
70 80
pF1KB8 LSVKEDAKEKDEKTTQDQLEKPQNEEK
:::::::::::::::::::::::::::
XP_011 LSVKEDAKEKDEKTTQDQLEKPQNEEK
60 70 80
>>XP_011534238 (OMIM: 606914) PREDICTED: cAMP-dependent (78 aa)
initn: 483 init1: 483 opt: 483 Z-score: 616.1 bits: 118.3 E(85289): 1.4e-27
Smith-Waterman score: 483; 100.0% identity (100.0% similar) in 78 aa overlap (10-87:1-78)
10 20 30 40 50 60
pF1KB8 MHILFVDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
10 20 30 40 50
70 80
pF1KB8 LSVKEDAKEKDEKTTQDQLEKPQNEEK
:::::::::::::::::::::::::::
XP_011 LSVKEDAKEKDEKTTQDQLEKPQNEEK
60 70
>>XP_011534237 (OMIM: 606914) PREDICTED: cAMP-dependent (78 aa)
initn: 483 init1: 483 opt: 483 Z-score: 616.1 bits: 118.3 E(85289): 1.4e-27
Smith-Waterman score: 483; 100.0% identity (100.0% similar) in 78 aa overlap (10-87:1-78)
10 20 30 40 50 60
pF1KB8 MHILFVDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
10 20 30 40 50
70 80
pF1KB8 LSVKEDAKEKDEKTTQDQLEKPQNEEK
:::::::::::::::::::::::::::
XP_011 LSVKEDAKEKDEKTTQDQLEKPQNEEK
60 70
>>XP_011534239 (OMIM: 606914) PREDICTED: cAMP-dependent (78 aa)
initn: 483 init1: 483 opt: 483 Z-score: 616.1 bits: 118.3 E(85289): 1.4e-27
Smith-Waterman score: 483; 100.0% identity (100.0% similar) in 78 aa overlap (10-87:1-78)
10 20 30 40 50 60
pF1KB8 MHILFVDVAMRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEA
10 20 30 40 50
70 80
pF1KB8 LSVKEDAKEKDEKTTQDQLEKPQNEEK
:::::::::::::::::::::::::::
XP_011 LSVKEDAKEKDEKTTQDQLEKPQNEEK
60 70
87 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 16:07:52 2016 done: Fri Nov 4 16:07:53 2016
Total Scan time: 4.360 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]