Result of FASTA (omim) for
pF1KB8853
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8853, 76 aa
1>>>pF1KB8853 76 - 76 aa - 76 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1837+/-0.000291; mu= 7.5638+/- 0.018
mean_var=53.0481+/-10.372, 0's: 0 Z-trim(116.7): 27 B-trim: 53 in 1/52
Lambda= 0.176092
statistics sampled from 28037 (28064) to 28037 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.723), E-opt: 0.2 (0.329), width: 16
Scan time: 3.970
The best scores are: opt bits E(85289)
XP_016869109 (OMIM: 606059) PREDICTED: cAMP-depend ( 76) 463 124.9 1.2e-29
NP_862822 (OMIM: 606059) cAMP-dependent protein ki ( 76) 463 124.9 1.2e-29
XP_016869110 (OMIM: 606059) PREDICTED: cAMP-depend ( 76) 463 124.9 1.2e-29
NP_006814 (OMIM: 606059) cAMP-dependent protein ki ( 76) 463 124.9 1.2e-29
XP_016869111 (OMIM: 606059) PREDICTED: cAMP-depend ( 76) 463 124.9 1.2e-29
XP_011534238 (OMIM: 606914) PREDICTED: cAMP-depend ( 78) 169 50.2 3.8e-07
NP_001257322 (OMIM: 606914) cAMP-dependent protein ( 78) 169 50.2 3.8e-07
XP_011534237 (OMIM: 606914) PREDICTED: cAMP-depend ( 78) 169 50.2 3.8e-07
XP_011534239 (OMIM: 606914) PREDICTED: cAMP-depend ( 78) 169 50.2 3.8e-07
NP_861460 (OMIM: 606914) cAMP-dependent protein ki ( 78) 169 50.2 3.8e-07
NP_115860 (OMIM: 606914) cAMP-dependent protein ki ( 78) 169 50.2 3.8e-07
NP_861459 (OMIM: 606914) cAMP-dependent protein ki ( 78) 169 50.2 3.8e-07
NP_001257323 (OMIM: 606914) cAMP-dependent protein ( 85) 169 50.3 4.1e-07
XP_011534234 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 169 50.3 4.1e-07
XP_011534233 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 169 50.3 4.1e-07
XP_011534235 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 169 50.3 4.1e-07
XP_011534236 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 169 50.3 4.1e-07
NP_001257324 (OMIM: 606914) cAMP-dependent protein ( 85) 169 50.3 4.1e-07
XP_011534232 (OMIM: 606914) PREDICTED: cAMP-depend ( 85) 169 50.3 4.1e-07
NP_861521 (OMIM: 604932) cAMP-dependent protein ki ( 76) 141 43.1 5.1e-05
NP_008997 (OMIM: 604932) cAMP-dependent protein ki ( 76) 141 43.1 5.1e-05
NP_001268374 (OMIM: 604932) cAMP-dependent protein ( 76) 141 43.1 5.1e-05
NP_001268373 (OMIM: 604932) cAMP-dependent protein ( 76) 141 43.1 5.1e-05
NP_861520 (OMIM: 604932) cAMP-dependent protein ki ( 76) 141 43.1 5.1e-05
XP_016883103 (OMIM: 604932) PREDICTED: cAMP-depend ( 76) 141 43.1 5.1e-05
XP_016883104 (OMIM: 604932) PREDICTED: cAMP-depend ( 76) 141 43.1 5.1e-05
XP_016883105 (OMIM: 604932) PREDICTED: cAMP-depend ( 76) 141 43.1 5.1e-05
>>XP_016869109 (OMIM: 606059) PREDICTED: cAMP-dependent (76 aa)
initn: 463 init1: 463 opt: 463 Z-score: 653.2 bits: 124.9 E(85289): 1.2e-29
Smith-Waterman score: 463; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KB8 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSS
10 20 30 40 50 60
70
pF1KB8 TEQSGEAQGEAAKSES
::::::::::::::::
XP_016 TEQSGEAQGEAAKSES
70
>>NP_862822 (OMIM: 606059) cAMP-dependent protein kinase (76 aa)
initn: 463 init1: 463 opt: 463 Z-score: 653.2 bits: 124.9 E(85289): 1.2e-29
Smith-Waterman score: 463; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KB8 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_862 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSS
10 20 30 40 50 60
70
pF1KB8 TEQSGEAQGEAAKSES
::::::::::::::::
NP_862 TEQSGEAQGEAAKSES
70
>>XP_016869110 (OMIM: 606059) PREDICTED: cAMP-dependent (76 aa)
initn: 463 init1: 463 opt: 463 Z-score: 653.2 bits: 124.9 E(85289): 1.2e-29
Smith-Waterman score: 463; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KB8 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSS
10 20 30 40 50 60
70
pF1KB8 TEQSGEAQGEAAKSES
::::::::::::::::
XP_016 TEQSGEAQGEAAKSES
70
>>NP_006814 (OMIM: 606059) cAMP-dependent protein kinase (76 aa)
initn: 463 init1: 463 opt: 463 Z-score: 653.2 bits: 124.9 E(85289): 1.2e-29
Smith-Waterman score: 463; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KB8 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSS
10 20 30 40 50 60
70
pF1KB8 TEQSGEAQGEAAKSES
::::::::::::::::
NP_006 TEQSGEAQGEAAKSES
70
>>XP_016869111 (OMIM: 606059) PREDICTED: cAMP-dependent (76 aa)
initn: 463 init1: 463 opt: 463 Z-score: 653.2 bits: 124.9 E(85289): 1.2e-29
Smith-Waterman score: 463; 100.0% identity (100.0% similar) in 76 aa overlap (1-76:1-76)
10 20 30 40 50 60
pF1KB8 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSS
10 20 30 40 50 60
70
pF1KB8 TEQSGEAQGEAAKSES
::::::::::::::::
XP_016 TEQSGEAQGEAAKSES
70
>>XP_011534238 (OMIM: 606914) PREDICTED: cAMP-dependent (78 aa)
initn: 174 init1: 160 opt: 169 Z-score: 249.3 bits: 50.2 E(85289): 3.8e-07
Smith-Waterman score: 169; 40.0% identity (75.7% similar) in 70 aa overlap (1-70:8-76)
10 20 30 40 50
pF1KB8 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGE
:::::. :.: .:.:.:::::. :: :.:. ....: ::: .:.... :
XP_011 MRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEALSVKEDAKE
10 20 30 40 50 60
60 70
pF1KB8 EDAQRSSTEQSGEAQGEAAKSES
.: .... .: . :.:
XP_011 KD-EKTTQDQLEKPQNEEK
70
>>NP_001257322 (OMIM: 606914) cAMP-dependent protein kin (78 aa)
initn: 174 init1: 160 opt: 169 Z-score: 249.3 bits: 50.2 E(85289): 3.8e-07
Smith-Waterman score: 169; 40.0% identity (75.7% similar) in 70 aa overlap (1-70:8-76)
10 20 30 40 50
pF1KB8 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGE
:::::. :.: .:.:.:::::. :: :.:. ....: ::: .:.... :
NP_001 MRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEALSVKEDAKE
10 20 30 40 50 60
60 70
pF1KB8 EDAQRSSTEQSGEAQGEAAKSES
.: .... .: . :.:
NP_001 KD-EKTTQDQLEKPQNEEK
70
>>XP_011534237 (OMIM: 606914) PREDICTED: cAMP-dependent (78 aa)
initn: 174 init1: 160 opt: 169 Z-score: 249.3 bits: 50.2 E(85289): 3.8e-07
Smith-Waterman score: 169; 40.0% identity (75.7% similar) in 70 aa overlap (1-70:8-76)
10 20 30 40 50
pF1KB8 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGE
:::::. :.: .:.:.:::::. :: :.:. ....: ::: .:.... :
XP_011 MRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEALSVKEDAKE
10 20 30 40 50 60
60 70
pF1KB8 EDAQRSSTEQSGEAQGEAAKSES
.: .... .: . :.:
XP_011 KD-EKTTQDQLEKPQNEEK
70
>>XP_011534239 (OMIM: 606914) PREDICTED: cAMP-dependent (78 aa)
initn: 174 init1: 160 opt: 169 Z-score: 249.3 bits: 50.2 E(85289): 3.8e-07
Smith-Waterman score: 169; 40.0% identity (75.7% similar) in 70 aa overlap (1-70:8-76)
10 20 30 40 50
pF1KB8 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGE
:::::. :.: .:.:.:::::. :: :.:. ....: ::: .:.... :
XP_011 MRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEALSVKEDAKE
10 20 30 40 50 60
60 70
pF1KB8 EDAQRSSTEQSGEAQGEAAKSES
.: .... .: . :.:
XP_011 KD-EKTTQDQLEKPQNEEK
70
>>NP_861460 (OMIM: 606914) cAMP-dependent protein kinase (78 aa)
initn: 174 init1: 160 opt: 169 Z-score: 249.3 bits: 50.2 E(85289): 3.8e-07
Smith-Waterman score: 169; 40.0% identity (75.7% similar) in 70 aa overlap (1-70:8-76)
10 20 30 40 50
pF1KB8 MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGE
:::::. :.: .:.:.:::::. :: :.:. ....: ::: .:.... :
NP_861 MRTDSSKMTDVESGVANFASSARAGRRNALPDIQSSAATDGTSDLPLKLEALSVKEDAKE
10 20 30 40 50 60
60 70
pF1KB8 EDAQRSSTEQSGEAQGEAAKSES
.: .... .: . :.:
NP_861 KD-EKTTQDQLEKPQNEEK
70
76 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 16:07:21 2016 done: Fri Nov 4 16:07:22 2016
Total Scan time: 3.970 Total Display time: -0.040
Function used was FASTA [36.3.4 Apr, 2011]