FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8835, 459 aa
  1>>>pF1KB8835 459 - 459 aa - 459 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.9324+/-0.000926; mu= 0.4285+/- 0.056
 mean_var=373.1347+/-81.447, 0's: 0 Z-trim(117.0): 739  B-trim: 846 in 1/54
 Lambda= 0.066396
 statistics sampled from 16818 (17677) to 16818 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.815), E-opt: 0.2 (0.543), width:  16
 Scan time:  4.100

The best scores are:                                      opt bits E(32554)
CCDS4727.1 ZBTB12 gene_id:221527|Hs108|chr6        ( 459) 3092 309.7   4e-84
CCDS6846.1 ZBTB6 gene_id:10773|Hs108|chr9          ( 424)  555 66.7 5.5e-11


>>CCDS4727.1 ZBTB12 gene_id:221527|Hs108|chr6             (459 aa)
 initn: 3092 init1: 3092 opt: 3092  Z-score: 1623.7  bits: 309.7 E(32554): 4e-84
Smith-Waterman score: 3092; 100.0% identity (100.0% similar) in 459 aa overlap (1-459:1-459)

               10        20        30        40        50        60
pF1KB8 MASGVEVLRFQLPGHEAATLRNMNQLRAEERFCDVTIVADSLKFRGHKVILAACSPFLRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MASGVEVLRFQLPGHEAATLRNMNQLRAEERFCDVTIVADSLKFRGHKVILAACSPFLRD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 QFLLNPSSELQVSLMHSARIVADLLLSCYTGALEFAVRDIVNYLTAASYLQMEHVVEKCR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QFLLNPSSELQVSLMHSARIVADLLLSCYTGALEFAVRDIVNYLTAASYLQMEHVVEKCR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 NALSQFIEPKIGLKEDGVSEASLVSSISATKSLLPPARTPKPAPKPPPPPPLPPPLLRPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NALSQFIEPKIGLKEDGVSEASLVSSISATKSLLPPARTPKPAPKPPPPPPLPPPLLRPV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 KLEFPLDEDLELKAEEEDEDEDEDVSDICIVKVESALEVAHRLKPPGGLGGGLGIGGSVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KLEFPLDEDLELKAEEEDEDEDEDVSDICIVKVESALEVAHRLKPPGGLGGGLGIGGSVG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 GHLGELAQSSVPPSTVAPPQGVVKACYSLSEDAEGEGLLLIPGGRASVGATSGLVEAAAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GHLGELAQSSVPPSTVAPPQGVVKACYSLSEDAEGEGLLLIPGGRASVGATSGLVEAAAV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 AMAARGAGGSLGAGGSRGPLPGGFSGGNPLKNIKCTKCPEVFQGVEKLVFHMRAQHFIFM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AMAARGAGGSLGAGGSRGPLPGGFSGGNPLKNIKCTKCPEVFQGVEKLVFHMRAQHFIFM
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 CPRCGKQFNHSSNLNRHMNVHRGVKSHSCGICGKCFTQKSTLHDHLNLHSGARPYRCSYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CPRCGKQFNHSSNLNRHMNVHRGVKSHSCGICGKCFTQKSTLHDHLNLHSGARPYRCSYC
              370       380       390       400       410       420

              430       440       450         
pF1KB8 DVRFAHKPAIRRHLKEQHGKTTAENVLEASVAEINVLIR
       :::::::::::::::::::::::::::::::::::::::
CCDS47 DVRFAHKPAIRRHLKEQHGKTTAENVLEASVAEINVLIR
              430       440       450         

>>CCDS6846.1 ZBTB6 gene_id:10773|Hs108|chr9               (424 aa)
 initn: 1034 init1: 460 opt: 555  Z-score: 310.7  bits: 66.7 E(32554): 5.5e-11
Smith-Waterman score: 825; 33.9% identity (62.3% similar) in 448 aa overlap (1-446:1-413)

               10        20        30        40        50        60
pF1KB8 MASGVEVLRFQLPGHEAATLRNMNQLRAEERFCDVTIVADSLKFRGHKVILAACSPFLRD
       ::.  .::.::.  .  ..:..:: :: .. ::::.:  .. .:.:::::::::: :.::
CCDS68 MAAESDVLHFQFEQQGDVVLQKMNLLRQQNLFCDVSIYINDTEFQGHKVILAACSTFMRD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 QFLLNPSSELQVSLMHSARIVADLLLSCYTGALEFAVRDIVNYLTAASYLQMEHVVEKCR
       ::::. :.........::..   :::::::::::   .....:::::::::: :.:::: 
CCDS68 QFLLTQSKHVRITILQSAEVGRKLLLSCYTGALEVKRKELLKYLTAASYLQMVHIVEKCT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 NALSQFIEPKIGLKEDGVSEASLVSSISATKSLLPPARTPKPAPKPPPPPPLPPPLLRPV
       .:::...:  ...:... ....: .:               :  :           .  .
CCDS68 EALSKYLEIDLSMKNNN-QHTDLCQS-------------SDPDVKNEDENSDKDCEIIEI
              130        140                    150       160      

              190       200       210       220       230          
pF1KB8 KLEFPLDEDLELKAEEEDEDEDEDVSDICIVKVESALEVAHRLKPPGGLGGGLGIGGS--
       . . :.. :...: ::         :.     :::     ...: :      .:.  .  
CCDS68 SEDSPVNIDFHVKEEE---------SNALQSTVESLTSERKEMKSPELSTVDIGFKDNEI
        170       180                190       200       210       

      240       250       260       270       280       290        
pF1KB8 VGGHLGELAQSSVPPSTVAPPQGVVKACYSLSEDAEGEGLLLIPGGRASVGATSGLVEAA
          :.  .. ..:  .  . :    :: . .::  ..   :.    .. :. . :  . .
CCDS68 CILHVESISTAGVENGQFSQPCTSSKASMYFSETQHS---LINSTVESRVAEVPGNQDQG
       220       230       240       250          260       270    

      300       310       320       330       340       350        
pF1KB8 AVAMAARGAGGSLGAGGSRGPLPGGFSGGNPLKNIKCTKCPEVFQGVEKLVFHMRAQHFI
            ..:. :...   .   :  :.:    :.. .: .::. :  ::. . :.. .: .
CCDS68 LFCENTEGSYGTVSEIQN---LEEGYS----LRH-QCPRCPRGFLHVENYLRHLK-MHKL
          280       290              300        310       320      

      360       370       380       390       400       410        
pF1KB8 FMCPRCGKQFNHSSNLNRHMNVHRGVKSHSCGICGKCFTQKSTLHDHLNLHSGARPYRCS
       :.: .::: :....:::::.  : :..  .: .: : :: ::::.::::.::: :::.: 
CCDS68 FLCLQCGKTFTQKKNLNRHIRGHMGIRPFQCTVCLKTFTAKSTLQDHLNIHSGDRPYKCH
         330       340       350       360       370       380     

      420       430       440       450         
pF1KB8 YCDVRFAHKPAIRRHLKEQHGKTTAENVLEASVAEINVLIR
        ::. : :: :...::   ::....:..             
CCDS68 CCDMDFKHKSALKKHLTSVHGRSSGEKLSRPDLKRQSLL  
         390       400       410       420      




459 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 15:58:17 2016 done: Fri Nov  4 15:58:18 2016
 Total Scan time:  4.100 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]