Result of FASTA (omim) for
pF1KB8810
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8810, 361 aa
1>>>pF1KB8810 361 - 361 aa - 361 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9670+/-0.000492; mu= 18.0468+/- 0.031
mean_var=81.7201+/-20.833, 0's: 0 Z-trim(108.5): 649 B-trim: 1537 in 2/47
Lambda= 0.141876
statistics sampled from 15789 (16555) to 15789 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.539), E-opt: 0.2 (0.194), width: 16
Scan time: 6.970
The best scores are: opt bits E(85289)
XP_016875894 (OMIM: 605741) PREDICTED: G-protein c ( 361) 2407 503.2 3.7e-142
NP_004942 (OMIM: 605741) G-protein coupled recepto ( 361) 2407 503.2 3.7e-142
NP_001269116 (OMIM: 300201) cysteinyl leukotriene ( 337) 595 132.3 1.6e-30
NP_006630 (OMIM: 300201) cysteinyl leukotriene rec ( 337) 595 132.3 1.6e-30
NP_001269117 (OMIM: 300201) cysteinyl leukotriene ( 337) 595 132.3 1.6e-30
NP_001269115 (OMIM: 300201) cysteinyl leukotriene ( 337) 595 132.3 1.6e-30
NP_001155970 (OMIM: 278150,609239) lysophosphatidi ( 344) 595 132.3 1.6e-30
NP_001155969 (OMIM: 278150,609239) lysophosphatidi ( 344) 595 132.3 1.6e-30
NP_005758 (OMIM: 278150,609239) lysophosphatidic a ( 344) 595 132.3 1.6e-30
XP_006724702 (OMIM: 300086) PREDICTED: lysophospha ( 370) 578 128.8 1.9e-29
XP_005262183 (OMIM: 300086) PREDICTED: lysophospha ( 370) 578 128.8 1.9e-29
NP_005287 (OMIM: 300086) lysophosphatidic acid rec ( 370) 578 128.8 1.9e-29
XP_016884927 (OMIM: 300086) PREDICTED: lysophospha ( 370) 578 128.8 1.9e-29
NP_001264929 (OMIM: 300086) lysophosphatidic acid ( 370) 578 128.8 1.9e-29
XP_016884926 (OMIM: 300086) PREDICTED: lysophospha ( 370) 578 128.8 1.9e-29
NP_002554 (OMIM: 601167) P2Y purinoceptor 1 [Homo ( 373) 536 120.2 7.4e-27
NP_001295397 (OMIM: 605666) cysteinyl leukotriene ( 346) 530 119.0 1.6e-26
NP_001295398 (OMIM: 605666) cysteinyl leukotriene ( 346) 530 119.0 1.6e-26
NP_001295405 (OMIM: 605666) cysteinyl leukotriene ( 346) 530 119.0 1.6e-26
NP_065110 (OMIM: 605666) cysteinyl leukotriene rec ( 346) 530 119.0 1.6e-26
NP_001295400 (OMIM: 605666) cysteinyl leukotriene ( 346) 530 119.0 1.6e-26
NP_001295396 (OMIM: 605666) cysteinyl leukotriene ( 346) 530 119.0 1.6e-26
NP_001295399 (OMIM: 605666) cysteinyl leukotriene ( 346) 530 119.0 1.6e-26
NP_001295394 (OMIM: 605666) cysteinyl leukotriene ( 346) 530 119.0 1.6e-26
NP_001983 (OMIM: 187930) proteinase-activated rece ( 425) 531 119.3 1.6e-26
NP_115942 (OMIM: 300903) probable G-protein couple ( 333) 525 117.9 3.2e-26
NP_033611 (OMIM: 106165,145500,267430) type-1 angi ( 359) 524 117.8 3.9e-26
NP_000676 (OMIM: 106165,145500,267430) type-1 angi ( 359) 524 117.8 3.9e-26
XP_005272654 (OMIM: 300241) PREDICTED: probable G- ( 381) 524 117.8 4.1e-26
NP_001091048 (OMIM: 300241) probable G-protein cou ( 381) 524 117.8 4.1e-26
NP_005291 (OMIM: 300241) probable G-protein couple ( 381) 524 117.8 4.1e-26
NP_114438 (OMIM: 106165,145500,267430) type-1 angi ( 388) 524 117.8 4.1e-26
NP_004826 (OMIM: 106165,145500,267430) type-1 angi ( 394) 524 117.8 4.2e-26
NP_114038 (OMIM: 106165,145500,267430) type-1 angi ( 394) 524 117.8 4.2e-26
XP_011544481 (OMIM: 300525) PREDICTED: P2Y purinoc ( 359) 523 117.6 4.5e-26
XP_011543933 (OMIM: 300525) PREDICTED: P2Y purinoc ( 359) 523 117.6 4.5e-26
XP_005274486 (OMIM: 300525) PREDICTED: P2Y purinoc ( 359) 523 117.6 4.5e-26
XP_011543934 (OMIM: 300525) PREDICTED: P2Y purinoc ( 359) 523 117.6 4.5e-26
XP_011544480 (OMIM: 300525) PREDICTED: P2Y purinoc ( 359) 523 117.6 4.5e-26
NP_835230 (OMIM: 300525) P2Y purinoceptor 8 [Homo ( 359) 523 117.6 4.5e-26
XP_005274835 (OMIM: 300525) PREDICTED: P2Y purinoc ( 359) 523 117.6 4.5e-26
XP_016862558 (OMIM: 600515,609821) PREDICTED: P2Y ( 342) 522 117.3 5e-26
NP_795345 (OMIM: 600515,609821) P2Y purinoceptor 1 ( 342) 522 117.3 5e-26
NP_073625 (OMIM: 600515,609821) P2Y purinoceptor 1 ( 342) 522 117.3 5e-26
XP_006724927 (OMIM: 300525) PREDICTED: P2Y purinoc ( 548) 523 117.7 6.1e-26
XP_006724506 (OMIM: 300525) PREDICTED: P2Y purinoc ( 548) 523 117.7 6.1e-26
NP_788085 (OMIM: 600041) P2Y purinoceptor 2 [Homo ( 377) 520 117.0 7.2e-26
NP_002555 (OMIM: 600041) P2Y purinoceptor 2 [Homo ( 377) 520 117.0 7.2e-26
NP_788086 (OMIM: 600041) P2Y purinoceptor 2 [Homo ( 377) 520 117.0 7.2e-26
XP_016873328 (OMIM: 600041) PREDICTED: P2Y purinoc ( 377) 515 115.9 1.5e-25
>>XP_016875894 (OMIM: 605741) PREDICTED: G-protein coupl (361 aa)
initn: 2407 init1: 2407 opt: 2407 Z-score: 2673.1 bits: 503.2 E(85289): 3.7e-142
Smith-Waterman score: 2407; 100.0% identity (100.0% similar) in 361 aa overlap (1-361:1-361)
10 20 30 40 50 60
pF1KB8 MDIQMANNFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDIQMANNFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KKINSTTLYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKINSTTLYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 FMTCLSIDRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FMTCLSIDRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 CMEYPNFEETKSLPWILLGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLTEKSGVNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CMEYPNFEETKSLPWILLGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLTEKSGVNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KALNTIILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVCLMNFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KALNTIILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVCLMNFN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 CCMDPFIYFFACKGYKRKVMRMLKRQVSVSISSAVKSAPEENSREMTETQMMIHSKSSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CCMDPFIYFFACKGYKRKVMRMLKRQVSVSISSAVKSAPEENSREMTETQMMIHSKSSNG
310 320 330 340 350 360
pF1KB8 K
:
XP_016 K
>>NP_004942 (OMIM: 605741) G-protein coupled receptor 18 (361 aa)
initn: 2407 init1: 2407 opt: 2407 Z-score: 2673.1 bits: 503.2 E(85289): 3.7e-142
Smith-Waterman score: 2407; 100.0% identity (100.0% similar) in 361 aa overlap (1-361:1-361)
10 20 30 40 50 60
pF1KB8 MDIQMANNFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MDIQMANNFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 KKINSTTLYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KKINSTTLYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 FMTCLSIDRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 FMTCLSIDRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 CMEYPNFEETKSLPWILLGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLTEKSGVNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 CMEYPNFEETKSLPWILLGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLTEKSGVNK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KALNTIILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVCLMNFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KALNTIILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVCLMNFN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 CCMDPFIYFFACKGYKRKVMRMLKRQVSVSISSAVKSAPEENSREMTETQMMIHSKSSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 CCMDPFIYFFACKGYKRKVMRMLKRQVSVSISSAVKSAPEENSREMTETQMMIHSKSSNG
310 320 330 340 350 360
pF1KB8 K
:
NP_004 K
>>NP_001269116 (OMIM: 300201) cysteinyl leukotriene rece (337 aa)
initn: 518 init1: 360 opt: 595 Z-score: 669.0 bits: 132.3 E(85289): 1.6e-30
Smith-Waterman score: 595; 29.3% identity (67.5% similar) in 311 aa overlap (38-346:30-334)
10 20 30 40 50 60
pF1KB8 NFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNRKKINSTT
::.. ..:. :: ..: :.... .: ..
NP_001 MDETGNLTVSSATCHDTIDDFRNQVYSTLYSMISVVGFFGNGFVLYVLIKTYHKKSAFQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 LYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVNFMTCLSI
.: ::...:.: . .:: :..::. : .:: :::... ..:.: : .. ::: .:.
NP_001 VYMINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 DRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERITCMEYPNF
: ::.: :.. .. ..:. ::. .::.:. . :.:. .:.: . :.: :.
NP_001 FRCIAIVFPVQNINLVTQKKARFVCVGIWIFVILTSSPFLMAKPQKDEKNNTKCFEPPQD
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 EETKSLPWIL-LGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLTEKSGVNKKALNTI
..::. .: . :.:...:..::..::..: :.. . .. :. .:::.. :
NP_001 NQTKNHVLVLHYVSLFVGFIIPFVIIIVCYTMIILTLLKKSMKKNLSS----HKKAIGMI
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB8 ILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVCLMNFNCCMDPF
... ..:.. : :::. :. .. .. :.. .: :. .:. : :::.::.
NP_001 MVVTAAFLVSFMPYHIQRTIHL--HFLHNETKPCDSVLRMQKSVVITLSLAASNCCFDPL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB8 IYFFACKGYKRKVMRMLKRQVS-VSISSAVKSAPEENSREMTETQMMIHSKSSNGK
.:::. ...... . :...: :. :.. :...:.
NP_001 LYFFSGGNFRKRLSTFRKHSLSSVTYVPRKKASLPEKGEEICKV
300 310 320 330
>>NP_006630 (OMIM: 300201) cysteinyl leukotriene recepto (337 aa)
initn: 518 init1: 360 opt: 595 Z-score: 669.0 bits: 132.3 E(85289): 1.6e-30
Smith-Waterman score: 595; 29.3% identity (67.5% similar) in 311 aa overlap (38-346:30-334)
10 20 30 40 50 60
pF1KB8 NFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNRKKINSTT
::.. ..:. :: ..: :.... .: ..
NP_006 MDETGNLTVSSATCHDTIDDFRNQVYSTLYSMISVVGFFGNGFVLYVLIKTYHKKSAFQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 LYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVNFMTCLSI
.: ::...:.: . .:: :..::. : .:: :::... ..:.: : .. ::: .:.
NP_006 VYMINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 DRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERITCMEYPNF
: ::.: :.. .. ..:. ::. .::.:. . :.:. .:.: . :.: :.
NP_006 FRCIAIVFPVQNINLVTQKKARFVCVGIWIFVILTSSPFLMAKPQKDEKNNTKCFEPPQD
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 EETKSLPWIL-LGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLTEKSGVNKKALNTI
..::. .: . :.:...:..::..::..: :.. . .. :. .:::.. :
NP_006 NQTKNHVLVLHYVSLFVGFIIPFVIIIVCYTMIILTLLKKSMKKNLSS----HKKAIGMI
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB8 ILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVCLMNFNCCMDPF
... ..:.. : :::. :. .. .. :.. .: :. .:. : :::.::.
NP_006 MVVTAAFLVSFMPYHIQRTIHL--HFLHNETKPCDSVLRMQKSVVITLSLAASNCCFDPL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB8 IYFFACKGYKRKVMRMLKRQVS-VSISSAVKSAPEENSREMTETQMMIHSKSSNGK
.:::. ...... . :...: :. :.. :...:.
NP_006 LYFFSGGNFRKRLSTFRKHSLSSVTYVPRKKASLPEKGEEICKV
300 310 320 330
>>NP_001269117 (OMIM: 300201) cysteinyl leukotriene rece (337 aa)
initn: 518 init1: 360 opt: 595 Z-score: 669.0 bits: 132.3 E(85289): 1.6e-30
Smith-Waterman score: 595; 29.3% identity (67.5% similar) in 311 aa overlap (38-346:30-334)
10 20 30 40 50 60
pF1KB8 NFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNRKKINSTT
::.. ..:. :: ..: :.... .: ..
NP_001 MDETGNLTVSSATCHDTIDDFRNQVYSTLYSMISVVGFFGNGFVLYVLIKTYHKKSAFQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 LYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVNFMTCLSI
.: ::...:.: . .:: :..::. : .:: :::... ..:.: : .. ::: .:.
NP_001 VYMINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 DRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERITCMEYPNF
: ::.: :.. .. ..:. ::. .::.:. . :.:. .:.: . :.: :.
NP_001 FRCIAIVFPVQNINLVTQKKARFVCVGIWIFVILTSSPFLMAKPQKDEKNNTKCFEPPQD
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 EETKSLPWIL-LGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLTEKSGVNKKALNTI
..::. .: . :.:...:..::..::..: :.. . .. :. .:::.. :
NP_001 NQTKNHVLVLHYVSLFVGFIIPFVIIIVCYTMIILTLLKKSMKKNLSS----HKKAIGMI
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB8 ILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVCLMNFNCCMDPF
... ..:.. : :::. :. .. .. :.. .: :. .:. : :::.::.
NP_001 MVVTAAFLVSFMPYHIQRTIHL--HFLHNETKPCDSVLRMQKSVVITLSLAASNCCFDPL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB8 IYFFACKGYKRKVMRMLKRQVS-VSISSAVKSAPEENSREMTETQMMIHSKSSNGK
.:::. ...... . :...: :. :.. :...:.
NP_001 LYFFSGGNFRKRLSTFRKHSLSSVTYVPRKKASLPEKGEEICKV
300 310 320 330
>>NP_001269115 (OMIM: 300201) cysteinyl leukotriene rece (337 aa)
initn: 518 init1: 360 opt: 595 Z-score: 669.0 bits: 132.3 E(85289): 1.6e-30
Smith-Waterman score: 595; 29.3% identity (67.5% similar) in 311 aa overlap (38-346:30-334)
10 20 30 40 50 60
pF1KB8 NFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNRKKINSTT
::.. ..:. :: ..: :.... .: ..
NP_001 MDETGNLTVSSATCHDTIDDFRNQVYSTLYSMISVVGFFGNGFVLYVLIKTYHKKSAFQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 LYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVNFMTCLSI
.: ::...:.: . .:: :..::. : .:: :::... ..:.: : .. ::: .:.
NP_001 VYMINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 DRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERITCMEYPNF
: ::.: :.. .. ..:. ::. .::.:. . :.:. .:.: . :.: :.
NP_001 FRCIAIVFPVQNINLVTQKKARFVCVGIWIFVILTSSPFLMAKPQKDEKNNTKCFEPPQD
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 EETKSLPWIL-LGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLTEKSGVNKKALNTI
..::. .: . :.:...:..::..::..: :.. . .. :. .:::.. :
NP_001 NQTKNHVLVLHYVSLFVGFIIPFVIIIVCYTMIILTLLKKSMKKNLSS----HKKAIGMI
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB8 ILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVCLMNFNCCMDPF
... ..:.. : :::. :. .. .. :.. .: :. .:. : :::.::.
NP_001 MVVTAAFLVSFMPYHIQRTIHL--HFLHNETKPCDSVLRMQKSVVITLSLAASNCCFDPL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB8 IYFFACKGYKRKVMRMLKRQVS-VSISSAVKSAPEENSREMTETQMMIHSKSSNGK
.:::. ...... . :...: :. :.. :...:.
NP_001 LYFFSGGNFRKRLSTFRKHSLSSVTYVPRKKASLPEKGEEICKV
300 310 320 330
>>NP_001155970 (OMIM: 278150,609239) lysophosphatidic ac (344 aa)
initn: 539 init1: 300 opt: 595 Z-score: 668.9 bits: 132.3 E(85289): 1.6e-30
Smith-Waterman score: 595; 31.3% identity (66.3% similar) in 297 aa overlap (19-310:5-293)
10 20 30 40 50 60
pF1KB8 MDIQMANNFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNR
:. . . : .. .:.::..::..: .:. ...
NP_001 MVSVNSSHCFYNDSFKYTLYGCMFSMVFVLGLISNCVAIYIFICVL
10 20 30 40
70 80 90 100 110 120
pF1KB8 KKINSTTLYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVN
: : :: : ::..::.::. .:: :: :.. .: .:: ::.:....:: : :...
NP_001 KVRNETTTYMINLAMSDLLFVFTLPFRIFYFTTR-NWPFGDLLCKISVMLFYTNMYGSIL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 FMTCLSIDRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERIT
:.::.:.:::.:.:.:.. . .. ..:: :: ::. :.. . : .. ...... .
NP_001 FLTCISVDRFLAIVYPFKSKTLRTKRNAKIVCTGVWLTVIGGSAPAVFVQSTHSQGNNAS
110 120 130 140 150 160
190 200 210 220 230
pF1KB8 CMEYPNFEET--KS-LPWILLGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLT-EKS
. :: :. :. : :.. ..:. .:::. . : :.. : . :.: .:
NP_001 EACFENFPEATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMVLKTLTK-----PVTLSRS
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB8 GVNK-KALNTIILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVC
.:: :.:. :.. ...: .::.::.. .: . . .: ..:..:: . . .:.:
NP_001 KINKTKVLKMIFVHLIIFCFCFVPYNINLILYSL--VRTQTFVNCSVVAAVRTMYPITLC
230 240 250 260 270
300 310 320 330 340 350
pF1KB8 LMNFNCCMDPFIYFFACKGYKRKVMRMLKRQVSVSISSAVKSAPEENSREMTETQMMIHS
. :::.::..:.:
NP_001 IAVSNCCFDPIVYYFTSDTIQNSIKMKNWSVRRSDFRFSEVHGAENFIQHNLQTLKSKIF
280 290 300 310 320 330
>>NP_001155969 (OMIM: 278150,609239) lysophosphatidic ac (344 aa)
initn: 539 init1: 300 opt: 595 Z-score: 668.9 bits: 132.3 E(85289): 1.6e-30
Smith-Waterman score: 595; 31.3% identity (66.3% similar) in 297 aa overlap (19-310:5-293)
10 20 30 40 50 60
pF1KB8 MDIQMANNFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNR
:. . . : .. .:.::..::..: .:. ...
NP_001 MVSVNSSHCFYNDSFKYTLYGCMFSMVFVLGLISNCVAIYIFICVL
10 20 30 40
70 80 90 100 110 120
pF1KB8 KKINSTTLYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVN
: : :: : ::..::.::. .:: :: :.. .: .:: ::.:....:: : :...
NP_001 KVRNETTTYMINLAMSDLLFVFTLPFRIFYFTTR-NWPFGDLLCKISVMLFYTNMYGSIL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 FMTCLSIDRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERIT
:.::.:.:::.:.:.:.. . .. ..:: :: ::. :.. . : .. ...... .
NP_001 FLTCISVDRFLAIVYPFKSKTLRTKRNAKIVCTGVWLTVIGGSAPAVFVQSTHSQGNNAS
110 120 130 140 150 160
190 200 210 220 230
pF1KB8 CMEYPNFEET--KS-LPWILLGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLT-EKS
. :: :. :. : :.. ..:. .:::. . : :.. : . :.: .:
NP_001 EACFENFPEATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMVLKTLTK-----PVTLSRS
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB8 GVNK-KALNTIILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVC
.:: :.:. :.. ...: .::.::.. .: . . .: ..:..:: . . .:.:
NP_001 KINKTKVLKMIFVHLIIFCFCFVPYNINLILYSL--VRTQTFVNCSVVAAVRTMYPITLC
230 240 250 260 270
300 310 320 330 340 350
pF1KB8 LMNFNCCMDPFIYFFACKGYKRKVMRMLKRQVSVSISSAVKSAPEENSREMTETQMMIHS
. :::.::..:.:
NP_001 IAVSNCCFDPIVYYFTSDTIQNSIKMKNWSVRRSDFRFSEVHGAENFIQHNLQTLKSKIF
280 290 300 310 320 330
>>NP_005758 (OMIM: 278150,609239) lysophosphatidic acid (344 aa)
initn: 539 init1: 300 opt: 595 Z-score: 668.9 bits: 132.3 E(85289): 1.6e-30
Smith-Waterman score: 595; 31.3% identity (66.3% similar) in 297 aa overlap (19-310:5-293)
10 20 30 40 50 60
pF1KB8 MDIQMANNFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNR
:. . . : .. .:.::..::..: .:. ...
NP_005 MVSVNSSHCFYNDSFKYTLYGCMFSMVFVLGLISNCVAIYIFICVL
10 20 30 40
70 80 90 100 110 120
pF1KB8 KKINSTTLYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVN
: : :: : ::..::.::. .:: :: :.. .: .:: ::.:....:: : :...
NP_005 KVRNETTTYMINLAMSDLLFVFTLPFRIFYFTTR-NWPFGDLLCKISVMLFYTNMYGSIL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB8 FMTCLSIDRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERIT
:.::.:.:::.:.:.:.. . .. ..:: :: ::. :.. . : .. ...... .
NP_005 FLTCISVDRFLAIVYPFKSKTLRTKRNAKIVCTGVWLTVIGGSAPAVFVQSTHSQGNNAS
110 120 130 140 150 160
190 200 210 220 230
pF1KB8 CMEYPNFEET--KS-LPWILLGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLT-EKS
. :: :. :. : :.. ..:. .:::. . : :.. : . :.: .:
NP_005 EACFENFPEATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMVLKTLTK-----PVTLSRS
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB8 GVNK-KALNTIILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVC
.:: :.:. :.. ...: .::.::.. .: . . .: ..:..:: . . .:.:
NP_005 KINKTKVLKMIFVHLIIFCFCFVPYNINLILYSL--VRTQTFVNCSVVAAVRTMYPITLC
230 240 250 260 270
300 310 320 330 340 350
pF1KB8 LMNFNCCMDPFIYFFACKGYKRKVMRMLKRQVSVSISSAVKSAPEENSREMTETQMMIHS
. :::.::..:.:
NP_005 IAVSNCCFDPIVYYFTSDTIQNSIKMKNWSVRRSDFRFSEVHGAENFIQHNLQTLKSKIF
280 290 300 310 320 330
>>XP_006724702 (OMIM: 300086) PREDICTED: lysophosphatidi (370 aa)
initn: 541 init1: 224 opt: 578 Z-score: 649.7 bits: 128.8 E(85289): 1.9e-29
Smith-Waterman score: 578; 30.6% identity (64.8% similar) in 330 aa overlap (38-355:46-368)
10 20 30 40 50 60
pF1KB8 NFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNRKKINSTT
::.:::.::. : ..: :. : . :.
XP_006 SSLRPRLGNATANNTCIVDDSFKYNLNGAVYSVVFILGLITNSVSLFVFCFRMKMRSETA
20 30 40 50 60 70
70 80 90 100 110 120
pF1KB8 LYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVNFMTCLSI
.. :::..::.::. .:: .: .: .. : .::.::.:.. .: : :... :.::.:.
XP_006 IFITNLAVSDLLFVCTLPFKI-FYNFNRHWPFGDTLCKISGTAFLTNIYGSMLFLTCISV
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB8 DRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERITCMEYPNF
:::.:.:.:.: :. ... :: :::::.. . . .. . ::.: .
XP_006 DRFLAIVYPFRSRTIRTRRNSAIVCAGVWILVLSGGISASLFSTTNVNNATTTCFEGFSK
140 150 160 170 180 190
190 200 210 220 230 240
pF1KB8 EETKS-LPWILLGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLTEKSGVNKKALNTI
. :. : : . .:...:::. . : : . .:: .. . :.::: . .
XP_006 RVWKTYLSKITIFIEVVGFIIPLILNVSCSSVV----LRTLRKPATLSQIGTNKKKVLKM
200 210 220 230 240 250
250 260 270 280 290 300
pF1KB8 ILI-IVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVCLMNFNCCMDP
: . ..:::.::.::. ... . . .: . . .: .. .: .:.:: ..:::.::
XP_006 ITVHMAVFVVCFVPYNSVLFLYAL--VRSQAITNCFLERFAKIMYPITLCLATLNCCFDP
260 270 280 290 300
310 320 330 340 350
pF1KB8 FIYFFACKGYKRKV-----MRM---LKRQVSVSISSAVKSAPEENSREMTET--QMMIHS
:::.:. ...... .:: .: .. .. . .. . :: : . :.. ..:..:
XP_006 FIYYFTLESFQKSFYINAHIRMESLFKTETPLTTKPSLPAIQEEVSDQTTNNGGELMLES
310 320 330 340 350 360
360
pF1KB8 KSSNGK
XP_006 TF
370
361 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 15:47:59 2016 done: Fri Nov 4 15:48:00 2016
Total Scan time: 6.970 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]