Result of FASTA (ccds) for
pF1KB8794
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8794, 330 aa
1>>>pF1KB8794 330 - 330 aa - 330 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4342+/-0.0008; mu= 17.4476+/- 0.049
mean_var=151.9847+/-50.553, 0's: 0 Z-trim(110.4): 170 B-trim: 1417 in 2/49
Lambda= 0.104034
statistics sampled from 11284 (11578) to 11284 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.698), E-opt: 0.2 (0.356), width: 16
Scan time: 2.830
The best scores are: opt bits E(32554)
CCDS303.1 GPR3 gene_id:2827|Hs108|chr1 ( 330) 2199 341.8 4.7e-94
CCDS5079.1 GPR6 gene_id:2830|Hs108|chr6 ( 362) 1294 206.0 3.8e-53
CCDS69172.1 GPR6 gene_id:2830|Hs108|chr6 ( 377) 1294 206.0 3.9e-53
CCDS9319.1 GPR12 gene_id:2835|Hs108|chr13 ( 334) 1276 203.2 2.4e-52
CCDS12407.1 LPAR2 gene_id:9170|Hs108|chr19 ( 351) 478 83.5 2.8e-16
CCDS700.1 LPAR3 gene_id:23566|Hs108|chr1 ( 353) 466 81.7 9.7e-16
CCDS777.1 S1PR1 gene_id:1901|Hs108|chr1 ( 382) 444 78.4 1e-14
CCDS6777.1 LPAR1 gene_id:1902|Hs108|chr9 ( 364) 442 78.1 1.2e-14
CCDS6680.1 S1PR3 gene_id:1903|Hs108|chr9 ( 378) 398 71.5 1.2e-12
CCDS12229.1 S1PR2 gene_id:9294|Hs108|chr19 ( 353) 394 70.9 1.7e-12
CCDS12240.1 S1PR5 gene_id:53637|Hs108|chr19 ( 398) 389 70.2 3.1e-12
CCDS12105.1 S1PR4 gene_id:8698|Hs108|chr19 ( 384) 384 69.4 5.2e-12
CCDS245.1 CNR2 gene_id:1269|Hs108|chr1 ( 360) 381 68.9 6.8e-12
>>CCDS303.1 GPR3 gene_id:2827|Hs108|chr1 (330 aa)
initn: 2199 init1: 2199 opt: 2199 Z-score: 1802.1 bits: 341.8 E(32554): 4.7e-94
Smith-Waterman score: 2199; 100.0% identity (100.0% similar) in 330 aa overlap (1-330:1-330)
10 20 30 40 50 60
pF1KB8 MMWGAGSPLAWLSAGSGNVNVSSVGPAEGPTGPAAPLPSPKAWDVVLCISGTLVSCENAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MMWGAGSPLAWLSAGSGNVNVSSVGPAEGPTGPAAPLPSPKAWDVVLCISGTLVSCENAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 VVAIIVGTPAFRAPMFLLVGSLAVADLLAGLGLVLHFAAVFCIGSAEMSLVLVGVLAMAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VVAIIVGTPAFRAPMFLLVGSLAVADLLAGLGLVLHFAAVFCIGSAEMSLVLVGVLAMAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 TASIGSLLAITVDRYLSLYNALTYYSETTVTRTYVMLALVWGGALGLGLLPVLAWNCLDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 TASIGSLLAITVDRYLSLYNALTYYSETTVTRTYVMLALVWGGALGLGLLPVLAWNCLDG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LTTCGVVYPLSKNHLVVLAIAFFMVFGIMLQLYAQICRIVCRHAQQIALQRHLLPASHYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 LTTCGVVYPLSKNHLVVLAIAFFMVFGIMLQLYAQICRIVCRHAQQIALQRHLLPASHYV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 ATRKGIATLAVVLGAFAACWLPFTVYCLLGDAHSPPLYTYLTLLPATYNSMINPIIYAFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 ATRKGIATLAVVLGAFAACWLPFTVYCLLGDAHSPPLYTYLTLLPATYNSMINPIIYAFR
250 260 270 280 290 300
310 320 330
pF1KB8 NQDVQKVLWAVCCCCSSSKIPFRSRSPSDV
::::::::::::::::::::::::::::::
CCDS30 NQDVQKVLWAVCCCCSSSKIPFRSRSPSDV
310 320 330
>>CCDS5079.1 GPR6 gene_id:2830|Hs108|chr6 (362 aa)
initn: 1369 init1: 1272 opt: 1294 Z-score: 1067.6 bits: 206.0 E(32554): 3.8e-53
Smith-Waterman score: 1294; 59.5% identity (83.7% similar) in 331 aa overlap (3-330:36-362)
10 20
pF1KB8 MMWGAGSPLAWLSAG---SGNVNVSSVGPAEG
:: . : :.:: .:....:: : :
CCDS50 ASLNDSQVVVVAAEGAAAAATAAGGPDTGEWGPPAAAA-LGAGGGANGSLELSSQLSA-G
10 20 30 40 50 60
30 40 50 60 70 80
pF1KB8 PTGPAAPLPSPKAWDVVLCISGTLVSCENALVVAIIVGTPAFRAPMFLLVGSLAVADLLA
: :. ::. . :::.::.:::... :::::::.:..:::.:.:::.::::::.:::::
CCDS50 P--PGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLA
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB8 GLGLVLHFAAVFCIGSAEMSLVLVGVLAMAFTASIGSLLAITVDRYLSLYNALTYYSETT
: ::.:::. . . : .::. :: :. .:.::..:::::::::::::::::::::. :
CCDS50 GCGLILHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITVDRYLSLYNALTYYSRRT
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB8 VTRTYVMLALVWGGALGLGLLPVLAWNCLDGLTTCGVVYPLSKNHLVVLAIAFFMVFGIM
. ....:: .: .:::::::::.:::: ..:.:: ::...:...:. :::::::::
CCDS50 LLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSAAFFMVFGIM
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB8 LQLYAQICRIVCRHAQQIALQRHLLPASHYVATRKGIATLAVVLGAFAACWLPFTVYCLL
:.::..::..: :::.:::::.: : : .:::::..:::::::.:.: ::::..::..
CCDS50 LHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVV
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB8 GDAHSPPLYTYLTLLPATYNSMINPIIYAFRNQDVQKVLWAVCCCCSSSKIPFRSRSPSD
:. ..: .::: :::::::::::::::::::::..:..:: . : : .::.::::::::.
CCDS50 GSHEDPAVYTYATLLPATYNSMINPIIYAFRNQEIQRALWLLLCGCFQSKVPFRSRSPSE
310 320 330 340 350 360
330
pF1KB8 V
:
CCDS50 V
>>CCDS69172.1 GPR6 gene_id:2830|Hs108|chr6 (377 aa)
initn: 1369 init1: 1272 opt: 1294 Z-score: 1067.4 bits: 206.0 E(32554): 3.9e-53
Smith-Waterman score: 1294; 59.5% identity (83.7% similar) in 331 aa overlap (3-330:51-377)
10 20
pF1KB8 MMWGAGSPLAWLSAG---SGNVNVSSVGPAEG
:: . : :.:: .:....:: : :
CCDS69 ASLNDSQVVVVAAEGAAAAATAAGGPDTGEWGPPAAAA-LGAGGGANGSLELSSQLSA-G
30 40 50 60 70
30 40 50 60 70 80
pF1KB8 PTGPAAPLPSPKAWDVVLCISGTLVSCENALVVAIIVGTPAFRAPMFLLVGSLAVADLLA
: :. ::. . :::.::.:::... :::::::.:..:::.:.:::.::::::.:::::
CCDS69 P--PGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLA
80 90 100 110 120 130
90 100 110 120 130 140
pF1KB8 GLGLVLHFAAVFCIGSAEMSLVLVGVLAMAFTASIGSLLAITVDRYLSLYNALTYYSETT
: ::.:::. . . : .::. :: :. .:.::..:::::::::::::::::::::. :
CCDS69 GCGLILHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITVDRYLSLYNALTYYSRRT
140 150 160 170 180 190
150 160 170 180 190 200
pF1KB8 VTRTYVMLALVWGGALGLGLLPVLAWNCLDGLTTCGVVYPLSKNHLVVLAIAFFMVFGIM
. ....:: .: .:::::::::.:::: ..:.:: ::...:...:. :::::::::
CCDS69 LLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSAAFFMVFGIM
200 210 220 230 240 250
210 220 230 240 250 260
pF1KB8 LQLYAQICRIVCRHAQQIALQRHLLPASHYVATRKGIATLAVVLGAFAACWLPFTVYCLL
:.::..::..: :::.:::::.: : : .:::::..:::::::.:.: ::::..::..
CCDS69 LHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVV
260 270 280 290 300 310
270 280 290 300 310 320
pF1KB8 GDAHSPPLYTYLTLLPATYNSMINPIIYAFRNQDVQKVLWAVCCCCSSSKIPFRSRSPSD
:. ..: .::: :::::::::::::::::::::..:..:: . : : .::.::::::::.
CCDS69 GSHEDPAVYTYATLLPATYNSMINPIIYAFRNQEIQRALWLLLCGCFQSKVPFRSRSPSE
320 330 340 350 360 370
330
pF1KB8 V
:
CCDS69 V
>>CCDS9319.1 GPR12 gene_id:2835|Hs108|chr13 (334 aa)
initn: 1255 init1: 1255 opt: 1276 Z-score: 1053.3 bits: 203.2 E(32554): 2.4e-52
Smith-Waterman score: 1276; 57.1% identity (82.8% similar) in 326 aa overlap (5-330:10-334)
10 20 30 40 50
pF1KB8 MMWGAGSPLAWLSAGSGNVNVSSVGPAEGPTGPAAPLPSPKAWDVVLCISGTLVS
.: : .:.:.... :.:.. .. :. : . ::.::: ::::.:
CCDS93 MNEDLKVNLSGLPRDYLDAAAAE-NISAAVSSRVPAVEPEPELVVNPWDIVLCTSGTLIS
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 CENALVVAIIVGTPAFRAPMFLLVGSLAVADLLAGLGLVLHFAAVFCIGSAEMSLVLVGV
::::.:: :: .:..:::::::.::::.::::::.::. .:. .. . : .:: .:.
CCDS93 CENAIVVLIIFHNPSLRAPMFLLIGSLALADLLAGIGLITNFVFAYLLQSEATKLVTIGL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 LAMAFTASIGSLLAITVDRYLSLYNALTYYSETTVTRTYVMLALVWGGALGLGLLPVLAW
.. .:.::. :::::::::::::: ::::.:: ::: :::::...:: .. ::::::..:
CCDS93 IVASFSASVCSLLAITVDRYLSLYYALTYHSERTVTFTYVMLVMLWGTSICLGLLPVMGW
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 NCLDGLTTCGVVYPLSKNHLVVLAIAFFMVFGIMLQLYAQICRIVCRHAQQIALQRHLLP
::: .::.:: ::.::. ..:...:...:..::::: :::.:: :::.:::::.:.:
CCDS93 NCLRDESTCSVVRPLTKNNAAILSVSFLFMFALMLQLYIQICKIVMRHAHQIALQHHFLA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 ASHYVATRKGIATLAVVLGAFAACWLPFTVYCLLGDAHSPPLYTYLTLLPATYNSMINPI
.::::.::::..:::..::.:::::.:::.: :..: : .::: :::::::::.:::.
CCDS93 TSHYVTTRKGVSTLAIILGTFAACWMPFTLYSLIADYTYPSIYTYATLLPATYNSIINPV
240 250 260 270 280 290
300 310 320 330
pF1KB8 IYAFRNQDVQKVLWAVCCCCSSSKIPFRSRSPSDV
:::::::..::.: .:: : :.. :.::::::
CCDS93 IYAFRNQEIQKALCLICCGCIPSSLAQRARSPSDV
300 310 320 330
>>CCDS12407.1 LPAR2 gene_id:9170|Hs108|chr19 (351 aa)
initn: 380 init1: 175 opt: 478 Z-score: 405.8 bits: 83.5 E(32554): 2.8e-16
Smith-Waterman score: 478; 33.8% identity (64.5% similar) in 290 aa overlap (40-315:30-314)
10 20 30 40 50 60
pF1KB8 AWLSAGSGNVNVSSVGPAEGPTGPAAPLPSPKAWDVVLCISGTLVSC----ENALVVAII
:: :::. : :: : ::.: :
CCDS12 MVIMGQCYYNETIGFFYNNSGKELSSHWRPK--DVVVVALGLTVSVLVLLTNLLVIAAI
10 20 30 40 50
70 80 90 100 110 120
pF1KB8 VGTPAFRAPMFLLVGSLAVADLLAGLG---LVLHFAAVFCIGSAEMSLVLVGVLAMAFTA
... :. :.. :.:.::.:::.::.. :..: . : : .. :.: ..::
CCDS12 ASNRRFHQPIYYLLGNLAAADLFAGVAYLFLMFHTGPRTARLSLEGWFLRQGLLDTSLTA
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB8 SIGSLLAITVDRYLSLYNALTYYSETTVTRTYVMLALVWGGALGLGLLPVLAWNCLDGLT
:...::::.:.:. :.. :. .:. :. .... :: .::::::::. .:.:: .:
CCDS12 SVATLLAIAVERHRSVM-AVQLHSRLPRGRVVMLIVGVWVAALGLGLLPAHSWHCLCALD
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 TCGVVYPL-SKNHLVVLAIAFFMVFGIMLQLYAQICRIVCRHAQQIALQRHLLPASHYVA
:. . :: :...:.: :.. ..:: .:. .:..: : :..:..: . : . .
CCDS12 RCSRMAPLLSRSYLAVWALSSLLVFLLMVAVYTRIFFYVRRRVQRMAEHVSCHP-RYRET
180 190 200 210 220 230
250 260 270 280 290
pF1KB8 TRKGIATLAVVLGAFAACWLPFTVYCLLG-----DAHSPPLYTYLTLLPATYNSMINPII
: . . :....::::..:: : : :: . . . :. :: : ::..: .
CCDS12 TLSLVKTVVIILGAFVVCWTPGQVVLLLDGLGCESCNVLAVEKYFLLL-AEANSLVNAAV
240 250 260 270 280 290
300 310 320 330
pF1KB8 YAFRNQDVQKVLWAV-CCCCSSSKIPFRSRSPSDV
:. :. ...... . :: :
CCDS12 YSCRDAEMRRTFRRLLCCACLRQSTRESVHYTSSAQGGASTRIMLPENGHPLMDSTL
300 310 320 330 340 350
>>CCDS700.1 LPAR3 gene_id:23566|Hs108|chr1 (353 aa)
initn: 406 init1: 180 opt: 466 Z-score: 396.0 bits: 81.7 E(32554): 9.7e-16
Smith-Waterman score: 466; 32.1% identity (63.6% similar) in 308 aa overlap (45-330:32-327)
20 30 40 50 60 70
pF1KB8 GSGNVNVSSVGPAEGPTGPAAPLPSPKAWDVVLCISGTL----VSCENALVVAIIVGTPA
.:::. ::. . :.::.: .. .
CCDS70 NECHYDKHMDFFYNRSNTDTVDDWTGTKLVIVLCV-GTFFCLFIFFSNSLVIAAVIKNRK
10 20 30 40 50 60
80 90 100 110 120
pF1KB8 FRAPMFLLVGSLAVADLLAGLGLVLHFAAVFCIGSAEMSLVLV------GVLAMAFTASI
:. :.. :...::.::..::.. :. .: : . .:.. :.: ..:::.
CCDS70 FHFPFYYLLANLAAADFFAGIAYVF---LMFNTGPVSKTLTVNRWFLRQGLLDSSLTASL
70 80 90 100 110
130 140 150 160 170 180
pF1KB8 GSLLAITVDRYLSLYNALTYYSETTVTRTYVMLALVWGGALGLGLLPVLAWNCLDGLTTC
.::.:.:.:..:.. . .:. : :. ... :::. :. .: .:.:.:::: ....:
CCDS70 TNLLVIAVERHMSIMR-MRVHSNLTKKRVTLLILLVWAIAIFMGAVPTLGWNCLCNISAC
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB8 GVVYPL-SKNHLVVLAIAFFMVFGIMLQLYAQICRIVCRHAQQIALQRHLLPA-SHYVAT
. . :. :...:: ... .:.: ::. .: .: : :... .:. : . :. .
CCDS70 SSLAPIYSRSYLVFWTVSNLMAFLIMVVVYLRIYVYVKRKTN--VLSPHTSGSISRRRTP
180 190 200 210 220 230
250 260 270 280 290
pF1KB8 RKGIATLAVVLGAFAACWLPFTVYCLL--------GDAHSPPLYTYLTLLPATYNSMINP
: . :. .:::::..:: : : :: : : . :.:: ::..::
CCDS70 MKLMKTVMTVLGAFVVCWTPGLVVLLLDGLNCRQCGVQHVKRWFLLLALL----NSVVNP
240 250 260 270 280 290
300 310 320 330
pF1KB8 IIYAFRNQDVQKVLWAVCCCCSSSKIPFR--SRSPSDV
:::.....:. .. . :: :. . : : :: :: :
CCDS70 IIYSYKDEDMYGTMKKMICCFSQEN-PERRPSRIPSTVLSRSDTGSQYIEDSISQGAVCN
300 310 320 330 340
CCDS70 KSTS
350
>>CCDS777.1 S1PR1 gene_id:1901|Hs108|chr1 (382 aa)
initn: 425 init1: 130 opt: 444 Z-score: 377.9 bits: 78.4 E(32554): 1e-14
Smith-Waterman score: 450; 28.6% identity (64.1% similar) in 304 aa overlap (39-327:44-343)
10 20 30 40 50 60
pF1KB8 LAWLSAGSGNVNVSSVGPAEGPTGPAAPLPSPKAWDVVLCISGTLVSCENALVVAIIVGT
: : .::. . .. :: .:. : :
CCDS77 SSVSDYVNYDIIVRHYNYTGKLNISADKENSIKLTSVVFILICCFIILENIFVLLTIWKT
20 30 40 50 60 70
70 80 90 100 110 120
pF1KB8 PAFRAPMFLLVGSLAVADLLAGLG----LVLHFAAVFCIGSAEMSLVLVGVLAMAFTASI
:. ::. ..:.::..:::::.. :.: :... . :. : : . .:..::.
CCDS77 KKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGATTYKLTPAQWFLRE-GSMFVALSASV
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB8 GSLLAITVDRYLSLYNALTYYSETTVTRTYVMLALVWGGALGLGLLPVLAWNCLDGLTTC
:::::...::... . . .. .. : ..... : .: :: ::...:::...:..:
CCDS77 FSLLAIAIERYITMLK-MKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCISALSSC
140 150 160 170 180 190
190 200 210 220 230 240
pF1KB8 GVVYPLSKNHLVVLAIAFFMVFGI-MLQLYAQICRIVCRHAQQIALQRHLLPASHYVATR
..: :: ..: ... . : .. . .. :: .: .: ........... ::. ...
CCDS77 STVLPLYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRSRRLTFRKNISKASR--SSE
200 210 220 230 240
250 260 270 280 290
pF1KB8 KGIA---TLAVVLGAFAACWLPFTVYCLLGDAHSPPLYTYLT-----LLPATYNSMINPI
:..: :. .::..: ::: :. . :: . . : :. :. :: :::
CCDS77 KSLALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPI
250 260 270 280 290 300
300 310 320 330
pF1KB8 IYAFRNQDVQKVLWAV--CCCCSSSKIPFRSRSPSDV
::.. :....... . :: : :. . . :
CCDS77 IYTLTNKEMRRAFIRIMSCCKCPSGDSAGKFKRPIIAGMEFSRSKSDNSSHPQKDEGDNP
310 320 330 340 350 360
CCDS77 ETIMSSGNVNSSS
370 380
>>CCDS6777.1 LPAR1 gene_id:1902|Hs108|chr9 (364 aa)
initn: 301 init1: 143 opt: 442 Z-score: 376.4 bits: 78.1 E(32554): 1.2e-14
Smith-Waterman score: 442; 29.6% identity (61.3% similar) in 297 aa overlap (45-329:57-342)
20 30 40 50 60 70
pF1KB8 GSGNVNVSSVGPAEGPTGPAAPLPSPKAWDVVLCISGTLVSCENALVVAIIVGTPAFRAP
...:: .. : ::.. : . :. :
CCDS67 NESIAFFYNRSGKHLATEWNTVSKLVMGLGITVCI---FIMLANLLVMVAIYVNRRFHFP
30 40 50 60 70 80
80 90 100 110 120
pF1KB8 MFLLVGSLAVADLLAGLGLVLHFAAVFCIGSAEMSLVLV------GVLAMAFTASIGSLL
.. :...::.::..:::. .: .: : :.. :.. ..:::...::
CCDS67 IYYLMANLAAADFFAGLA---YFYLMFNTGPNTRRLTVSTWLLRQGLIDTSLTASVANLL
90 100 110 120 130 140
130 140 150 160 170 180
pF1KB8 AITVDRYLSLYNALTYYSETTVTRTYVMLALVWGGALGLGLLPVLAWNCLDGLTTCGVVY
::...:..... . ... . :. :.....: :. .: .: ..:::. . .:. .
CCDS67 AIAIERHITVFR-MQLHTRMSNRRVVVVIVVIWTMAIVMGAIPSVGWNCICDIENCSNMA
150 160 170 180 190
190 200 210 220 230 240
pF1KB8 PL-SKNHLVVLAIAFFMVFGIMLQLYAQICRIVCRHAQQIALQRHLL-PASHYVATRKGI
:: : ..:: :: ...: .:. :::.: : . . . ..:: : . . . .
CCDS67 PLYSDSYLVFWAIFNLVTFVVMVVLYAHIFGYV--RQRTMRMSRHSSGPRRNRDTMMSLL
200 210 220 230 240 250
250 260 270 280 290 300
pF1KB8 ATLAVVLGAFAACWLPFTVYCLLGDAHSPPL----YTYLTLLPATYNSMINPIIYAFRNQ
:...::::: :: : : :: :. : : . :: : .:: .:::::..:..
CCDS67 KTVVIVLGAFIICWTPGLVLLLL-DVCCPQCDVLAYEKFFLLLAEFNSAMNPIIYSYRDK
260 270 280 290 300 310
310 320 330
pF1KB8 DVQKVLWAVCCCCSSSKIPFRSRSPSDV
... .. . :: . :. : ::
CCDS67 EMSATFRQILCC-QRSENPTGPTEGSDRSASSLNHTILAGVHSNDHSVV
320 330 340 350 360
>>CCDS6680.1 S1PR3 gene_id:1903|Hs108|chr9 (378 aa)
initn: 289 init1: 127 opt: 398 Z-score: 340.6 bits: 71.5 E(32554): 1.2e-12
Smith-Waterman score: 398; 26.9% identity (63.3% similar) in 283 aa overlap (45-315:47-316)
20 30 40 50 60 70
pF1KB8 GSGNVNVSSVGPAEGPTGPAAPLPSPKAWDVVLCISGTLVSCENALVVAIIVGTPAFRAP
.:.: ... :: .:. : . :.
CCDS66 TLREHYQYVGKLAGRLKEASEGSTLTTVLFLVIC---SFIVLENLMVLIAIWKNNKFHNR
20 30 40 50 60 70
80 90 100 110 120 130
pF1KB8 MFLLVGSLAVADLLAGLG----LVLHFAAVFCIGSAEMSLVLVGVLAMAFTASIGSLLAI
:....:.::. :::::.. ... .: . : . .. : . .:. :: :::::
CCDS66 MYFFIGNLALCDLLAGIAYKVNILMSGKKTFSL-SPTVWFLREGSMFVALGASTCSLLAI
80 90 100 110 120 130
140 150 160 170 180 190
pF1KB8 TVDRYLSLYNALTYYSETTVTRTYVMLALVWGGALGLGLLPVLAWNCLDGLTTCGVVYPL
...:.:.. . . :. . :....... : :. :: ::.:.:::: .: :... ::
CCDS66 AIERHLTMIK-MRPYDANKRHRVFLLIGMCWLIAFTLGALPILGWNCLHNLPDCSTILPL
140 150 160 170 180 190
200 210 220 230 240
pF1KB8 SKNHLVVLAIAFFMVFGI-MLQLYAQICRIVCRHAQQIALQRHLLPASHYVATRKG--IA
... ... :..: .. . .. :::.: .: ....: .: . :. .
CCDS66 YSKKYIAFCISIFTAILVTIVILYARIYFLVKSSSRKVA--------NHNNSERSMALLR
200 210 220 230 240
250 260 270 280 290 300
pF1KB8 TLAVVLGAFAACWLPFTVYCLLGDA----HSPPLY-TYLTLLPATYNSMINPIIYAFRNQ
:...:...: ::: :. . :. : : :. . .. :. :: .::.::.. ..
CCDS66 TVVIVVSVFIACWSPLFILFLIDVACRVQACPILFKAQWFIVLAVLNSAMNPVIYTLASK
250 260 270 280 290 300
310 320 330
pF1KB8 DVQKVLWAVCCCCSSSKIPFRSRSPSDV
....... . : :
CCDS66 EMRRAFFRLVCNCLVRGRGARASPIQPALDPSRSKSSSSNNSSHSPKVKEDLPHTAPSSC
310 320 330 340 350 360
>>CCDS12229.1 S1PR2 gene_id:9294|Hs108|chr19 (353 aa)
initn: 397 init1: 130 opt: 394 Z-score: 337.6 bits: 70.9 E(32554): 1.7e-12
Smith-Waterman score: 448; 33.3% identity (63.5% similar) in 285 aa overlap (42-313:38-305)
20 30 40 50 60 70
pF1KB8 LSAGSGNVNVSSVGPAEGPTGPAAPLPSPKAWDVVLCISGTLVSCENALVVAIIVGTPAF
:. :.:: . . :: ::. .. . :
CCDS12 YLNPNKVQEHYNYTKETLETQETTSRQVASAFIVILCCA---IVVENLLVLIAVARNSKF
10 20 30 40 50 60
80 90 100 110 120
pF1KB8 RAPMFLLVGSLAVADLLAGLGLVLHFAAVFCIGSAEMSLVLVGVLA------MAFTASIG
.. :.:..:.::..:::::...: : .. ::. . :. : .: ....::.
CCDS12 HSAMYLFLGNLAASDLLAGVAFV---ANTLLSGSVTLRLTPVQWFAREGSAFITLSASVF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SLLAITVDRYLSLYNALTYYSETTVTRTYVMLALVWGGALGLGLLPVLAWNCLDGLTTCG
:::::...:.... .. : :. . : .... : .: :: ::.:.:::: : .:.
CCDS12 SLLAIAIERHVAIAKVKLYGSDKSC-RMLLLIGASWLISLVLGGLPILGWNCLGHLEACS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 VVYPLSKNHLVVLAIAFFMVFGIMLQLYAQICRIVCRHAQQIALQRHL-LPASHYVATRK
.: :: .: :. ....: . :.: . : :: : .. . : . : . .: :
CCDS12 TVLPLYAKHYVLCVVTIFSI--ILLAIVALYVRIYC-----VVRSSHADMAAPQTLALLK
190 200 210 220 230
250 260 270 280 290
pF1KB8 GIATLAVVLGAFAACWLPFTVYCLLGDA---HS-PPLY-TYLTLLPATYNSMINPIIYAF
:...:::.: .:::: :: : :: : :: .. . .: ::..::.::..
CCDS12 ---TVTIVLGVFIVCWLPAFSILLLDYACPVHSCPILYKAHYFFAVSTLNSLLNPVIYTW
240 250 260 270 280 290
300 310 320 330
pF1KB8 RNQDVQK-VLWAVCCCCSSSKIPFRSRSPSDV
:..:... :: . :
CCDS12 RSRDLRREVLRPLQCWRPGVGVQGRRRGGTPGHHLLPLRSSSSLERGMHMPTSPTFLEGN
300 310 320 330 340 350
330 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 15:39:45 2016 done: Fri Nov 4 15:39:45 2016
Total Scan time: 2.830 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]