Result of FASTA (omim) for
pF1KB8788
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8788, 300 aa
1>>>pF1KB8788 300 - 300 aa - 300 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3086+/-0.000385; mu= 7.4377+/- 0.024
mean_var=145.7774+/-29.497, 0's: 0 Z-trim(116.5): 24 B-trim: 337 in 1/57
Lambda= 0.106226
statistics sampled from 27629 (27653) to 27629 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.324), width: 16
Scan time: 7.590
The best scores are: opt bits E(85289)
NP_694968 (OMIM: 616961) GTPase IMAP family member ( 300) 1936 308.1 1.4e-83
NP_060796 (OMIM: 608087) GTPase IMAP family member ( 329) 660 112.6 1.1e-24
XP_005250074 (OMIM: 608087) PREDICTED: GTPase IMAP ( 343) 660 112.6 1.1e-24
NP_060854 (OMIM: 608086) GTPase IMAP family member ( 307) 630 107.9 2.5e-23
NP_570115 (OMIM: 608084) GTPase IMAP family member ( 306) 615 105.6 1.2e-22
NP_056475 (OMIM: 608085) GTPase IMAP family member ( 337) 594 102.5 1.2e-21
NP_078987 (OMIM: 616960) GTPase IMAP family member ( 292) 584 100.9 3.2e-21
NP_001231001 (OMIM: 616960) GTPase IMAP family mem ( 362) 584 100.9 3.8e-21
XP_005250008 (OMIM: 616962) PREDICTED: GTPase IMAP ( 456) 470 83.6 8.2e-16
XP_005250007 (OMIM: 616962) PREDICTED: GTPase IMAP ( 665) 470 83.7 1.1e-15
NP_783161 (OMIM: 616962) GTPase IMAP family member ( 665) 470 83.7 1.1e-15
>>NP_694968 (OMIM: 616961) GTPase IMAP family member 7 [ (300 aa)
initn: 1936 init1: 1936 opt: 1936 Z-score: 1621.6 bits: 308.1 E(85289): 1.4e-83
Smith-Waterman score: 1936; 100.0% identity (100.0% similar) in 300 aa overlap (1-300:1-300)
10 20 30 40 50 60
pF1KB8 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_694 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 VVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_694 VVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 KSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_694 KSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 QVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLVEEDKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_694 QVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLVEEDKH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 KSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFKDVFNRIWKMLSEIWHRFLSKCKFYSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_694 KSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFKDVFNRIWKMLSEIWHRFLSKCKFYSS
250 260 270 280 290 300
>>NP_060796 (OMIM: 608087) GTPase IMAP family member 4 [ (329 aa)
initn: 580 init1: 540 opt: 660 Z-score: 564.2 bits: 112.6 E(85289): 1.1e-24
Smith-Waterman score: 660; 38.8% identity (72.1% similar) in 276 aa overlap (3-270:25-298)
10 20 30
pF1KB8 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRI
: .. .::::::::::.:::::.:.:::...: :
NP_060 MAAQYGSMSFNPSTPGASYGPGRQEPRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGT
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB8 AAQAVTKNCQKASREWQGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLV
::...::.:.: : :. .:.::::::.:::. : ::: :::. . :::::..::
NP_060 AAKSITKKCEKRSSSWKETELVVVDTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 LLLGRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVK
. ::::::::.:.. : .::. : . :...::::..: ..::.. .: .....
NP_060 VPLGRYTEEEHKATEKILKMFGERARSFMILIFTRKDDLGDTNLHDYLREAPEDIQDLMD
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 ECGNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREE
:.: ::..: :.. ::.:.: .:. ::...:. :. . ... .:. .::..... .
NP_060 IFGDRYCALNN--KATGAEQEAQRAQLLGLIQRVVRENKEGCYTNRMYQRAEEEIQKQTQ
190 200 210 220 230
220 230 240 250 260 270
pF1KB8 VLRKIYTDQLNEEIKLVEED--------KHKSEEEKEKEIKLLKLKYDEKIKNIREEAER
...... .:..: ..:. . : :.::.:. :: .: .:.. :
NP_060 AMQELHRVELEREKARIREEYEEKIRKLEDKVEQEKRKKQMEKKLAEQEAHYAVRQQRAR
240 250 260 270 280 290
280 290 300
pF1KB8 NIFKDVFNRIWKMLSEIWHRFLSKCKFYSS
NP_060 TEVESKDGILELIMTALQIASFILLRLFAED
300 310 320
>>XP_005250074 (OMIM: 608087) PREDICTED: GTPase IMAP fam (343 aa)
initn: 580 init1: 540 opt: 660 Z-score: 563.9 bits: 112.6 E(85289): 1.1e-24
Smith-Waterman score: 660; 38.8% identity (72.1% similar) in 276 aa overlap (3-270:39-312)
10 20 30
pF1KB8 MAESEDRSLRIVLVGKTGSGKSATANTILGEE
: .. .::::::::::.:::::.:.:::..
XP_005 SFNPSTPGASYGERAFSAPQTRLQGGPGRQEPRNSQLRIVLVGKTGAGKSATGNSILGRK
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB8 IFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGP
.: : ::...::.:.: : :. .:.::::::.:::. : ::: :::. . :::
XP_005 VFHSGTAAKSITKKCEKRSSSWKETELVVVDTPGIFDTEVPNAETSKEIIRCILLTSPGP
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 HAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFIADADVG
::..::. ::::::::.:.. : .::. : . :...::::..: ..::.. .:
XP_005 HALLLVVPLGRYTEEEHKATEKILKMFGERARSFMILIFTRKDDLGDTNLHDYLREAPED
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 LKSIVKECGNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIYKDTEER
..... :.: ::..: :.. ::.:.: .:. ::...:. :. . ... .:. .::.
XP_005 IQDLMDIFGDRYCALNN--KATGAEQEAQRAQLLGLIQRVVRENKEGCYTNRMYQRAEEE
190 200 210 220 230 240
220 230 240 250 260
pF1KB8 LKQREEVLRKIYTDQLNEEIKLVEED--------KHKSEEEKEKEIKLLKLKYDEKIKNI
.... ....... .:..: ..:. . : :.::.:. :: .: .
XP_005 IQKQTQAMQELHRVELEREKARIREEYEEKIRKLEDKVEQEKRKKQMEKKLAEQEAHYAV
250 260 270 280 290 300
270 280 290 300
pF1KB8 REEAERNIFKDVFNRIWKMLSEIWHRFLSKCKFYSS
:.. :
XP_005 RQQRARTEVESKDGILELIMTALQIASFILLRLFAED
310 320 330 340
>>NP_060854 (OMIM: 608086) GTPase IMAP family member 5 [ (307 aa)
initn: 656 init1: 501 opt: 630 Z-score: 539.7 bits: 107.9 E(85289): 2.5e-23
Smith-Waterman score: 630; 41.2% identity (73.7% similar) in 243 aa overlap (8-249:27-264)
10 20 30 40
pF1KB8 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQ
.:::.:::::: :::::.:.:::. .:.:.. ::
NP_060 MGGFQRGKYGTMAEGRSEDNLSATPPALRIILVGKTGCGKSATGNSILGQPVFESKLRAQ
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 AVTKNCQKASREWQGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLL
.::..:: . :.:: .::::::..:... . . :.:. : . : ::::...::. :
NP_060 SVTRTCQVKTGTWNGRKVLVVDTPSIFESQADTQELYKNIGDCYLLSAPGPHVLLLVIQL
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB8 GRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFIADAD-VGLKSIVKEC
::.: .. .. .: ::: .::.:.:::::.::.: ::.. :..:..: .::..:.::
NP_060 GRFTAQDTVAIRKVKEVFGTGAMRHVVILFTHKEDLGGQALDDYVANTDNCSLKDLVREC
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB8 GNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVL
: :::.: : :...: ::. .::.. . ::.. :.:.. :.. . .
NP_060 ERRYCAFNN--WGSVEEQRQQQAELLAVIERLGREREGSFHSNDLFLDAQLLQRTGAGAC
190 200 210 220 230
230 240 250 260 270 280
pF1KB8 RKIYTDQLNEEIKLVEEDKHKSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFKDVFNRI
.. : : . ... . .::: .: .:.:
NP_060 QEDYR-QYQAKVEW-QVEKHK-QELRENESNWAYKALLRVKHLMLLHYEIFVFLLLCSIL
240 250 260 270 280 290
>>NP_570115 (OMIM: 608084) GTPase IMAP family member 1 [ (306 aa)
initn: 512 init1: 259 opt: 615 Z-score: 527.3 bits: 105.6 E(85289): 1.2e-22
Smith-Waterman score: 615; 42.0% identity (77.0% similar) in 226 aa overlap (2-223:20-243)
10 20 30 40
pF1KB8 MAESEDRSLR-IVLVGKTGSGKSATANTILGEEIFDSRIAAQ
:.:...: : ..:::.::.:::::.:.:::.. : ::..:
NP_570 MGGRKMATDEENVYGLEENAQSRQESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGAT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 AVTKNCQKASREWQGRDLLVVDTPGLFDTKES-LDTTCKEISRCIISSCPGPHAIVLVLL
.::. : .::.:. . ::::: .:... : : :.: ..: . : :::::..::
NP_570 SVTRACTTGSRRWDKCHVEVVDTPDIFSSQVSKTDPGCEERGHCYLLSAPGPHALLLVTQ
70 80 90 100 110 120
110 120 130 140 150
pF1KB8 LGRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFIADADV-GLKSIVKE
:::.: ..:..: .. .::....: :::.:::::.: : :.::...... .:. .: :
NP_570 LGRFTAQDQQAVRQVRDMFGEDVLKWMVIVFTRKEDLAGGSLHDYVSNTENRALRELVAE
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 CGNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIYKDTEE-RLKQREE
::.: :::.: ... :.:.::..:. ..: .: ..::..:...:. .. : ::
NP_570 CGGRVCAFDN--RATGREQEAQVEQLLGMVEGLVLEHKGAHYSNEVYELAQVLRWAGPEE
190 200 210 220 230
220 230 240 250 260 270
pF1KB8 VLRKIYTDQLNEEIKLVEEDKHKSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFKDVFN
::..
NP_570 RLRRVAERVAARVQRRPWGAWLSARLWKWLKSPRSWRLGLALLLGGALLFWVLLHRRWSE
240 250 260 270 280 290
>>NP_056475 (OMIM: 608085) GTPase IMAP family member 2 [ (337 aa)
initn: 639 init1: 485 opt: 594 Z-score: 509.4 bits: 102.5 E(85289): 1.2e-21
Smith-Waterman score: 598; 38.3% identity (75.2% similar) in 230 aa overlap (9-227:23-250)
10 20 30 40
pF1KB8 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKN
:::.::::::.::::..:.:: .. :.:....:..::.
NP_056 MDQNEHSHWGPHAKGQCASRSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 CQKASREWQGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTE
:.:.. : .:.....::: .:. :. .. ::..:: . : ::::...:: :::::
NP_056 CSKSQGSWGNREIVIIDTPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB8 EEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFIADADV-GLKSIVKECGNRCC
..:... .: .::..:: : ..:::.::.:.: :. :.. :.: .:...: ::.: :
NP_056 QDQQAAQRVKEIFGEDAMGHTIVLFTHKEDLNGGSLMDYMHDSDNKALSKLVAACGGRIC
130 140 150 160 170 180
170 180 190 200 210
pF1KB8 AFSNSKKTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIYK----------DTEERLKQ
::.: . :. ...::.::.. :: ... ..: .... .:. ..::.:.
NP_056 AFNNRAEGSN--QDDQVKELMDCIEDLLMEKNGDHYTNGLYSLIQRSKCGPVGSDERVKE
190 200 210 220 230
220 230 240 250 260 270
pF1KB8 REEVLRKIYTDQLNEEIKLVEEDKHKSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFKD
.. : : . :
NP_056 FKQSLIKYMETQRSYTALAEANCLKGALIKTQLCVLFCIQLFLRLIILWLCILHSMCNLF
240 250 260 270 280 290
>>NP_078987 (OMIM: 616960) GTPase IMAP family member 6 i (292 aa)
initn: 533 init1: 253 opt: 584 Z-score: 501.9 bits: 100.9 E(85289): 3.2e-21
Smith-Waterman score: 584; 37.1% identity (71.1% similar) in 256 aa overlap (7-258:39-291)
10 20 30
pF1KB8 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDS
: ::..:.::::::::::.:.:::...:.:
NP_078 IPQENPPEELSQDPVLELSGGLREKEQKTPRRLRLILMGKTGSGKSATGNSILGRDVFES
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB8 RIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIV
..... :::. :. :::: :..: :.:::.... . : ... : . :. : :::::..
NP_078 KLSTRPVTKTSQRRSREWAGKELEVIDTPNILSPQVSPEVA-DAICQAIVLSAPGPHAVL
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 LVLLLGRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFIADADV-GLKS
:: :::.:.:.:..: .. ::: ... : ...:::::.: : :..:.. ... .:
NP_078 LVTQLGRFTDEDQQVVRRLQEVFGVGVLGHTILVFTRKEDLAGGSLEDYVRETNNQALAW
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 IVKECGNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQ
. . : :.:.: ... :.:.:..::.: .: .. ::: :.:. :. :.. ..
NP_078 LDVTLARRHCGFNN--RAQGEEQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB8 REEVLRKIYTDQLNEEIKLVE---EDKHKSEEEKEKEIKLLKLKYDEKIKNIREEAERNI
.: :.. : .:.. : : . ..:.:. . : : :
NP_078 KELQERQVSQGQGSEDVPGEESWLEGLSQIQKESEEAHRCLLGKADL
250 260 270 280 290
280 290 300
pF1KB8 FKDVFNRIWKMLSEIWHRFLSKCKFYSS
>>NP_001231001 (OMIM: 616960) GTPase IMAP family member (362 aa)
initn: 533 init1: 253 opt: 584 Z-score: 500.6 bits: 100.9 E(85289): 3.8e-21
Smith-Waterman score: 584; 37.1% identity (71.1% similar) in 256 aa overlap (7-258:109-361)
10 20 30
pF1KB8 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDS
: ::..:.::::::::::.:.:::...:.:
NP_001 DKMGYMGPYPSSLCFLWIFLGLREKEQKTPRRLRLILMGKTGSGKSATGNSILGRDVFES
80 90 100 110 120 130
40 50 60 70 80 90
pF1KB8 RIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIV
..... :::. :. :::: :..: :.:::.... . : ... : . :. : :::::..
NP_001 KLSTRPVTKTSQRRSREWAGKELEVIDTPNILSPQVSPEVA-DAICQAIVLSAPGPHAVL
140 150 160 170 180 190
100 110 120 130 140 150
pF1KB8 LVLLLGRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFIADADV-GLKS
:: :::.:.:.:..: .. ::: ... : ...:::::.: : :..:.. ... .:
NP_001 LVTQLGRFTDEDQQVVRRLQEVFGVGVLGHTILVFTRKEDLAGGSLEDYVRETNNQALAW
200 210 220 230 240 250
160 170 180 190 200 210
pF1KB8 IVKECGNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQ
. . : :.:.: ... :.:.:..::.: .: .. ::: :.:. :. :.. ..
NP_001 LDVTLARRHCGFNN--RAQGEEQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRL
260 270 280 290 300 310
220 230 240 250 260 270
pF1KB8 REEVLRKIYTDQLNEEIKLVE---EDKHKSEEEKEKEIKLLKLKYDEKIKNIREEAERNI
.: :.. : .:.. : : . ..:.:. . : : :
NP_001 KELQERQVSQGQGSEDVPGEESWLEGLSQIQKESEEAHRCLLGKADL
320 330 340 350 360
280 290 300
pF1KB8 FKDVFNRIWKMLSEIWHRFLSKCKFYSS
>>XP_005250008 (OMIM: 616962) PREDICTED: GTPase IMAP fam (456 aa)
initn: 591 init1: 373 opt: 470 Z-score: 404.8 bits: 83.6 E(85289): 8.2e-16
Smith-Waterman score: 500; 37.9% identity (73.7% similar) in 232 aa overlap (3-223:224-451)
10 20 30
pF1KB8 MAESEDRSLRIVLVGKTGSGKSATANTILGEE
.. ...: :::::..:.:::::.:.:::
XP_005 NTNGGPYHVNFKTEGSRFQDCVNEAASQEGDKPQETLNIVLVGRSGTGKSATGNSILGSL
200 210 220 230 240 250
40 50 60 70 80
pF1KB8 IFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPG---LFDTKESLDTTCKEISRCIISSC
.: ::. :: :::. :.. : :.:....:::::. ..:.... . .:..::. : :
XP_005 VFTSRLRAQPVTKTSQSGRRTWDGQEVVVVDTPSFNQMLDVEKDPSRLEEEVKRCL-SCC
260 270 280 290 300 310
90 100 110 120 130 140
pF1KB8 P-GPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFIAD
: .:::. :::.:::.. .:: ..:.:: . :. ..::::::.: . ...::. .
XP_005 EKGDTFFVLVFQLGRFTEEDKTAVAKLEAIFGADFTKYAIMLFTRKEDLGAGNLEDFMKN
320 330 340 350 360 370
150 160 170 180 190 200
pF1KB8 ADV-GLKSIVKECGNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCN--EGAYFSDD-
.: .:. : :.:: : ::: :.:.:..:. :.::. :. .. . . . : ...
XP_005 SDNKALRRIFKKCGRRVCAF-NNKETGQAQ-ETQVKALLTKVNDLRKESGWSGYPHTQEN
380 390 400 410 420 430
210 220 230 240 250 260
pF1KB8 ---IYKDTEERLKQREEVLRKIYTDQLNEEIKLVEEDKHKSEEEKEKEIKLLKLKYDEKI
. :...: ..: :..:...
XP_005 VSKLIKNVQE-MSQAEKLLKNLIGILQ
440 450
>--
initn: 591 init1: 373 opt: 470 Z-score: 404.8 bits: 83.6 E(85289): 8.2e-16
Smith-Waterman score: 470; 40.1% identity (73.4% similar) in 192 aa overlap (9-200:11-200)
10 20 30 40 50
pF1KB8 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRD
::..:.:: ::::::.:.:::...: :... :.: : ::. : . :
XP_005 MSEQSCQMSELRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 LLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAV
..:.::: ::.. . ..:..:. : :. ::..::. .:..:.:...:. :. :
XP_005 VVVIDTPDLFSSIACAEDKQRNIQHCLELSAPSLHALLLVIAIGHFTREDEETAKGIQQV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 FGKSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEK
:: : .:..:.::::..: . ..::: . . ::..:.. .: : : :.: .:: :.
XP_005 FGAEARRHIIIVFTRKDDLGDDLLQDFI-EKNKPLKQLVQDYEGRYCIF-NNKTNSKDEQ
130 140 150 160 170
180 190 200 210 220 230
pF1KB8 ESQVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLVEED
.:: ::.. .:..:. : : :
XP_005 ITQVLELLRKVESLVNTNGGPYHVNFKTEGSRFQDCVNEAASQEGDKPQETLNIVLVGRS
180 190 200 210 220 230
>>XP_005250007 (OMIM: 616962) PREDICTED: GTPase IMAP fam (665 aa)
initn: 605 init1: 373 opt: 470 Z-score: 402.5 bits: 83.7 E(85289): 1.1e-15
Smith-Waterman score: 504; 38.7% identity (73.5% similar) in 230 aa overlap (5-223:435-660)
10 20 30
pF1KB8 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIF
: ..: :::::..:.:::::.:.::: .:
XP_005 GEEEQRQADELLEKIESMVHQNGNKHCVFREKETLNIVLVGRSGTGKSATGNSILGSLVF
410 420 430 440 450 460
40 50 60 70 80 90
pF1KB8 DSRIAAQAVTKNCQKASREWQGRDLLVVDTPG---LFDTKESLDTTCKEISRCIISSCP-
::. :: :::. :.. : :.:....:::::. ..:.... . .:..::. : :
XP_005 TSRLRAQPVTKTSQSGRRTWDGQEVVVVDTPSFNQMLDVEKDPSRLEEEVKRCL-SCCEK
470 480 490 500 510 520
100 110 120 130 140 150
pF1KB8 GPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFIADAD
: .:::. :::.:::.. .:: ..:.:: . :. ..::::::.: . ...::. ..:
XP_005 GDTFFVLVFQLGRFTEEDKTAVAKLEAIFGADFTKYAIMLFTRKEDLGAGNLEDFMKNSD
530 540 550 560 570 580
160 170 180 190 200
pF1KB8 V-GLKSIVKECGNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCN--EGAYFSDD---
.:. : :.:: : ::: :.:.:..:. :.::. :. .. . . . : ...
XP_005 NKALRRIFKKCGRRVCAF-NNKETGQAQ-ETQVKALLTKVNDLRKESGWSGYPHTQENVS
590 600 610 620 630 640
210 220 230 240 250 260
pF1KB8 -IYKDTEERLKQREEVLRKIYTDQLNEEIKLVEEDKHKSEEEKEKEIKLLKLKYDEKIKN
. :...: ..: :..:...
XP_005 KLIKNVQE-MSQAEKLLKNLIGILQ
650 660
>--
initn: 605 init1: 373 opt: 470 Z-score: 402.5 bits: 83.7 E(85289): 1.1e-15
Smith-Waterman score: 470; 40.1% identity (73.4% similar) in 192 aa overlap (9-200:11-200)
10 20 30 40 50
pF1KB8 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRD
::..:.:: ::::::.:.:::...: :... :.: : ::. : . :
XP_005 MSEQSCQMSELRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 LLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAV
..:.::: ::.. . ..:..:. : :. ::..::. .:..:.:...:. :. :
XP_005 VVVIDTPDLFSSIACAEDKQRNIQHCLELSAPSLHALLLVIAIGHFTREDEETAKGIQQV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 FGKSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEK
:: : .:..:.::::..: . ..::: . . ::..:.. .: : : :.: .:: :.
XP_005 FGAEARRHIIIVFTRKDDLGDDLLQDFI-EKNKPLKQLVQDYEGRYCIF-NNKTNSKDEQ
130 140 150 160 170
180 190 200 210 220 230
pF1KB8 ESQVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLVEED
.:: ::.. .:..:. : : :
XP_005 ITQVLELLRKVESLVNTNGGPYHVNFKTEGSRFQDCVNEAASQEGDKPQGPRERQLQSTG
180 190 200 210 220 230
>--
initn: 392 init1: 199 opt: 410 Z-score: 352.9 bits: 74.5 E(85289): 6.5e-13
Smith-Waterman score: 410; 36.7% identity (73.4% similar) in 188 aa overlap (9-196:248-426)
10 20 30
pF1KB8 MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRI
: ..:::: :.::::..:.:::.. :.. .
XP_005 AASQEGDKPQGPRERQLQSTGPEQNPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGF
220 230 240 250 260 270
40 50 60 70 80 90
pF1KB8 AAQAVTKNCQKASREWQGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLV
. :.::.. . :: :. . . ..:.: . . : ..:. :. . : : ::::..::
XP_005 SEQSVTQSFLSESRSWRKKKVSIIDAPDISSLK-NIDS---EVRKHI---CTGPHAFLLV
280 290 300 310 320 330
100 110 120 130 140 150
pF1KB8 LLLGRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVK
:: ::.... ... :. ::.. ...:.::.::::.: :.. :. ... .: ....
XP_005 TPLGFYTKNDEAVLSTIQNNFGEKFFEYMIILLTRKEDLGDQDLDTFLRNSNKALYGLIQ
340 350 360 370 380 390
160 170 180 190 200 210
pF1KB8 ECGNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREE
.: :: :: : . :.. :.. :..::.: ::.::. :
XP_005 KCKNRYSAF-NYRATGE-EEQRQADELLEKIESMVHQNGNKHCVFREKETLNIVLVGRSG
400 410 420 430 440
220 230 240 250 260 270
pF1KB8 VLRKIYTDQLNEEIKLVEEDKHKSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFKDVFN
XP_005 TGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTWDGQEVVVVDTPSFNQMLDVEKDPS
450 460 470 480 490 500
300 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 15:37:21 2016 done: Fri Nov 4 15:37:22 2016
Total Scan time: 7.590 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]