Result of FASTA (ccds) for
pF1KB8730
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8730, 393 aa
1>>>pF1KB8730 393 - 393 aa - 393 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.6771+/-0.000803; mu= 3.5270+/- 0.049
mean_var=202.7134+/-40.709, 0's: 0 Z-trim(115.5): 30 B-trim: 116 in 1/50
Lambda= 0.090081
statistics sampled from 16042 (16072) to 16042 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.8), E-opt: 0.2 (0.494), width: 16
Scan time: 3.440
The best scores are: opt bits E(32554)
CCDS11118.1 TP53 gene_id:7157|Hs108|chr17 ( 393) 2730 366.7 2.1e-101
CCDS73969.1 TP53 gene_id:7157|Hs108|chr17 ( 354) 2463 331.9 5.4e-91
CCDS45605.1 TP53 gene_id:7157|Hs108|chr17 ( 346) 2325 314.0 1.3e-85
CCDS45606.1 TP53 gene_id:7157|Hs108|chr17 ( 341) 2322 313.6 1.7e-85
CCDS73970.1 TP53 gene_id:7157|Hs108|chr17 ( 307) 2058 279.3 3.3e-75
CCDS73971.1 TP53 gene_id:7157|Hs108|chr17 ( 302) 2055 278.9 4.3e-75
CCDS73966.1 TP53 gene_id:7157|Hs108|chr17 ( 261) 1817 247.9 7.9e-66
CCDS73963.1 TP53 gene_id:7157|Hs108|chr17 ( 234) 1616 221.7 5.3e-58
CCDS73967.1 TP53 gene_id:7157|Hs108|chr17 ( 214) 1412 195.2 4.7e-50
CCDS73968.1 TP53 gene_id:7157|Hs108|chr17 ( 209) 1409 194.8 6.1e-50
CCDS73964.1 TP53 gene_id:7157|Hs108|chr17 ( 187) 1211 169.0 3.1e-42
CCDS73965.1 TP53 gene_id:7157|Hs108|chr17 ( 182) 1208 168.6 4e-42
CCDS59965.1 TP73 gene_id:7161|Hs108|chr1 ( 403) 936 133.5 3.3e-31
CCDS44051.1 TP73 gene_id:7161|Hs108|chr1 ( 426) 936 133.6 3.4e-31
CCDS44050.1 TP73 gene_id:7161|Hs108|chr1 ( 450) 936 133.6 3.5e-31
CCDS55566.1 TP73 gene_id:7161|Hs108|chr1 ( 499) 936 133.6 3.8e-31
CCDS55568.1 TP73 gene_id:7161|Hs108|chr1 ( 540) 936 133.6 4.1e-31
CCDS55567.1 TP73 gene_id:7161|Hs108|chr1 ( 555) 936 133.6 4.2e-31
CCDS55569.1 TP73 gene_id:7161|Hs108|chr1 ( 565) 936 133.6 4.2e-31
CCDS44049.1 TP73 gene_id:7161|Hs108|chr1 ( 587) 936 133.7 4.4e-31
CCDS46980.1 TP63 gene_id:8626|Hs108|chr3 ( 393) 932 133.0 4.6e-31
CCDS49.1 TP73 gene_id:7161|Hs108|chr1 ( 636) 936 133.7 4.6e-31
CCDS46979.1 TP63 gene_id:8626|Hs108|chr3 ( 461) 932 133.1 5.2e-31
CCDS46977.1 TP63 gene_id:8626|Hs108|chr3 ( 487) 932 133.1 5.4e-31
CCDS46976.1 TP63 gene_id:8626|Hs108|chr3 ( 555) 932 133.1 6e-31
CCDS46978.1 TP63 gene_id:8626|Hs108|chr3 ( 586) 932 133.1 6.2e-31
CCDS3293.1 TP63 gene_id:8626|Hs108|chr3 ( 680) 932 133.2 7e-31
CCDS82887.1 TP63 gene_id:8626|Hs108|chr3 ( 676) 919 131.5 2.3e-30
>>CCDS11118.1 TP53 gene_id:7157|Hs108|chr17 (393 aa)
initn: 2730 init1: 2730 opt: 2730 Z-score: 1934.1 bits: 366.7 E(32554): 2.1e-101
Smith-Waterman score: 2730; 99.7% identity (99.7% similar) in 393 aa overlap (1-393:1-393)
10 20 30 40 50 60
pF1KB8 MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 DEAPRMPEAAPRVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAK
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 PGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPG
310 320 330 340 350 360
370 380 390
pF1KB8 GSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD
:::::::::::::::::::::::::::::::::
CCDS11 GSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD
370 380 390
>>CCDS73969.1 TP53 gene_id:7157|Hs108|chr17 (354 aa)
initn: 2463 init1: 2463 opt: 2463 Z-score: 1747.2 bits: 331.9 E(32554): 5.4e-91
Smith-Waterman score: 2463; 99.7% identity (99.7% similar) in 354 aa overlap (40-393:1-354)
10 20 30 40 50 60
pF1KB8 VEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEA
::::::::::::::::::::::::::::::
CCDS73 MDDLMLSPDDIEQWFTEDPGPDEAPRMPEA
10 20 30
70 80 90 100 110 120
pF1KB8 APRVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPA
:: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 APPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPA
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 LNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 PPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRR
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 PILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALP
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB8 NNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 NNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHL
280 290 300 310 320 330
370 380 390
pF1KB8 KSKKGQSTSRHKKLMFKTEGPDSD
::::::::::::::::::::::::
CCDS73 KSKKGQSTSRHKKLMFKTEGPDSD
340 350
>>CCDS45605.1 TP53 gene_id:7157|Hs108|chr17 (346 aa)
initn: 2489 init1: 2324 opt: 2325 Z-score: 1650.4 bits: 314.0 E(32554): 1.3e-85
Smith-Waterman score: 2325; 97.4% identity (98.2% similar) in 341 aa overlap (1-341:1-341)
10 20 30 40 50 60
pF1KB8 MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 DEAPRMPEAAPRVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAK
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 PGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPG
:::::::::::::::::::::::::::::::. :. .:
CCDS45 PGSTKRALPNNTSSSPQPKKKPLDGEYFTLQMLLDLRWCYFLINSS
310 320 330 340
370 380 390
pF1KB8 GSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD
>>CCDS45606.1 TP53 gene_id:7157|Hs108|chr17 (341 aa)
initn: 2322 init1: 2322 opt: 2322 Z-score: 1648.4 bits: 313.6 E(32554): 1.7e-85
Smith-Waterman score: 2322; 99.7% identity (99.7% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB8 MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 DEAPRMPEAAPRVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAK
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 RCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 SCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 PGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPG
:::::::::::::::::::::::::::::::
CCDS45 PGSTKRALPNNTSSSPQPKKKPLDGEYFTLQDQTSFQKENC
310 320 330 340
370 380 390
pF1KB8 GSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD
>>CCDS73970.1 TP53 gene_id:7157|Hs108|chr17 (307 aa)
initn: 2222 init1: 2057 opt: 2058 Z-score: 1463.6 bits: 279.3 E(32554): 3.3e-75
Smith-Waterman score: 2058; 97.0% identity (98.0% similar) in 302 aa overlap (40-341:1-302)
10 20 30 40 50 60
pF1KB8 VEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEA
::::::::::::::::::::::::::::::
CCDS73 MDDLMLSPDDIEQWFTEDPGPDEAPRMPEA
10 20 30
70 80 90 100 110 120
pF1KB8 APRVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPA
:: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 APPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPA
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 LNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 PPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRR
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 PILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALP
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB8 NNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHL
::::::::::::::::::::::. :. .:
CCDS73 NNTSSSPQPKKKPLDGEYFTLQMLLDLRWCYFLINSS
280 290 300
370 380 390
pF1KB8 KSKKGQSTSRHKKLMFKTEGPDSD
>>CCDS73971.1 TP53 gene_id:7157|Hs108|chr17 (302 aa)
initn: 2055 init1: 2055 opt: 2055 Z-score: 1461.6 bits: 278.9 E(32554): 4.3e-75
Smith-Waterman score: 2055; 99.7% identity (99.7% similar) in 292 aa overlap (40-331:1-292)
10 20 30 40 50 60
pF1KB8 VEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEA
::::::::::::::::::::::::::::::
CCDS73 MDDLMLSPDDIEQWFTEDPGPDEAPRMPEA
10 20 30
70 80 90 100 110 120
pF1KB8 APRVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPA
:: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 APPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPA
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB8 LNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB8 PPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRR
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB8 PILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALP
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB8 NNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHL
::::::::::::::::::::::
CCDS73 NNTSSSPQPKKKPLDGEYFTLQDQTSFQKENC
280 290 300
>>CCDS73966.1 TP53 gene_id:7157|Hs108|chr17 (261 aa)
initn: 1817 init1: 1817 opt: 1817 Z-score: 1295.3 bits: 247.9 E(32554): 7.9e-66
Smith-Waterman score: 1817; 100.0% identity (100.0% similar) in 261 aa overlap (133-393:1-261)
110 120 130 140 150 160
pF1KB8 YQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAI
::::::::::::::::::::::::::::::
CCDS73 MFCQLAKTCPVQLWVDSTPPPGTRVRAMAI
10 20 30
170 180 190 200 210 220
pF1KB8 YKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEP
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB8 PEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDR
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB8 RTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFR
160 170 180 190 200 210
350 360 370 380 390
pF1KB8 ELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD
220 230 240 250 260
>>CCDS73963.1 TP53 gene_id:7157|Hs108|chr17 (234 aa)
initn: 1616 init1: 1616 opt: 1616 Z-score: 1154.8 bits: 221.7 E(32554): 5.3e-58
Smith-Waterman score: 1616; 100.0% identity (100.0% similar) in 234 aa overlap (160-393:1-234)
130 140 150 160 170 180
pF1KB8 LNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA
::::::::::::::::::::::::::::::
CCDS73 MAIYKQSQHMTEVVRRCPHHERCSDSDGLA
10 20 30
190 200 210 220 230 240
pF1KB8 PPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRR
40 50 60 70 80 90
250 260 270 280 290 300
pF1KB8 PILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALP
100 110 120 130 140 150
310 320 330 340 350 360
pF1KB8 NNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 NNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHL
160 170 180 190 200 210
370 380 390
pF1KB8 KSKKGQSTSRHKKLMFKTEGPDSD
::::::::::::::::::::::::
CCDS73 KSKKGQSTSRHKKLMFKTEGPDSD
220 230
>>CCDS73967.1 TP53 gene_id:7157|Hs108|chr17 (214 aa)
initn: 1438 init1: 1411 opt: 1412 Z-score: 1012.1 bits: 195.2 E(32554): 4.7e-50
Smith-Waterman score: 1412; 96.2% identity (97.6% similar) in 209 aa overlap (133-341:1-209)
110 120 130 140 150 160
pF1KB8 YQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAI
::::::::::::::::::::::::::::::
CCDS73 MFCQLAKTCPVQLWVDSTPPPGTRVRAMAI
10 20 30
170 180 190 200 210 220
pF1KB8 YKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEP
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB8 PEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDR
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB8 RTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFR
:::::::::::::::::::::::::::::::::::::::::::::::::. :. .:
CCDS73 RTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQMLLDLRWCYFL
160 170 180 190 200 210
350 360 370 380 390
pF1KB8 ELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD
CCDS73 INSS
>>CCDS73968.1 TP53 gene_id:7157|Hs108|chr17 (209 aa)
initn: 1409 init1: 1409 opt: 1409 Z-score: 1010.1 bits: 194.8 E(32554): 6.1e-50
Smith-Waterman score: 1409; 100.0% identity (100.0% similar) in 199 aa overlap (133-331:1-199)
110 120 130 140 150 160
pF1KB8 YQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAI
::::::::::::::::::::::::::::::
CCDS73 MFCQLAKTCPVQLWVDSTPPPGTRVRAMAI
10 20 30
170 180 190 200 210 220
pF1KB8 YKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEP
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB8 PEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDR
100 110 120 130 140 150
290 300 310 320 330 340
pF1KB8 RTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFR
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQDQTSFQKENC
160 170 180 190 200
350 360 370 380 390
pF1KB8 ELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD
393 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:44:18 2016 done: Sat Nov 5 02:44:19 2016
Total Scan time: 3.440 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]